Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 AC010469.2-201ENST00000496412 480 ntBASIC0.71□□□□□ -2.3
TREX1Q9NSU2 DEFB108E-201ENST00000524692 240 ntBASIC0.71□□□□□ -2.3
TREX1Q9NSU2 AC027288.2-201ENST00000553028 243 ntBASIC0.71□□□□□ -2.3
TREX1Q9NSU2 AL512360.1-201ENST00000555346 234 ntBASIC0.71□□□□□ -2.3
TREX1Q9NSU2 MIR3611-201ENST00000584484 83 ntBASIC0.71□□□□□ -2.3
TREX1Q9NSU2 AC019193.3-201ENST00000609144 554 ntBASIC0.71□□□□□ -2.3
TREX1Q9NSU2 AC009248.2-201ENST00000619826 254 ntBASIC0.71□□□□□ -2.3
TREX1Q9NSU2 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.71□□□□□ -2.3
TREX1Q9NSU2 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.7□□□□□ -2.3
TREX1Q9NSU2 SNORD114-26-201ENST00000363543 72 ntBASIC0.7□□□□□ -2.3
TREX1Q9NSU2 Y_RNA.184-201ENST00000363884 108 ntBASIC0.7□□□□□ -2.3
TREX1Q9NSU2 RNU6-342P-201ENST00000384521 104 ntBASIC0.7□□□□□ -2.3
TREX1Q9NSU2 RNU6-95P-201ENST00000384697 107 ntBASIC0.7□□□□□ -2.3
TREX1Q9NSU2 MIR598-201ENST00000384868 97 ntBASIC0.7□□□□□ -2.3
TREX1Q9NSU2 MIR517A-201ENST00000385001 87 ntBASIC0.7□□□□□ -2.3
TREX1Q9NSU2 SNORD12-201ENST00000391002 90 ntBASIC0.7□□□□□ -2.3
TREX1Q9NSU2 RNU6-159P-201ENST00000391080 106 ntBASIC0.7□□□□□ -2.3
TREX1Q9NSU2 MTCO3P40-201ENST00000392516 676 ntBASIC0.7□□□□□ -2.3
TREX1Q9NSU2 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.7□□□□□ -2.3
TREX1Q9NSU2 MTND1P26-201ENST00000440488 538 ntBASIC0.7□□□□□ -2.3
TREX1Q9NSU2 MTND4P18-201ENST00000447010 465 ntBASIC0.7□□□□□ -2.3
TREX1Q9NSU2 AC093850.1-201ENST00000454121 251 ntBASIC0.7□□□□□ -2.3
TREX1Q9NSU2 RPL39P39-201ENST00000455840 151 ntBASIC0.7□□□□□ -2.3
TREX1Q9NSU2 RPL30P10-201ENST00000488148 337 ntBASIC0.7□□□□□ -2.3
TREX1Q9NSU2 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC0.7□□□□□ -2.3
TREX1Q9NSU2 PDCD5P2-201ENST00000507570 312 ntBASIC0.7□□□□□ -2.3
TREX1Q9NSU2 SNORD79.1-201ENST00000516069 84 ntBASIC0.7□□□□□ -2.3
TREX1Q9NSU2 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC0.7□□□□□ -2.3
TREX1Q9NSU2 AC090049.2-201ENST00000550377 109 ntBASIC0.7□□□□□ -2.3
TREX1Q9NSU2 AC010525.2-201ENST00000590920 195 ntBASIC0.7□□□□□ -2.3
TREX1Q9NSU2 MTND5P26-201ENST00000426018 1752 ntBASIC0.7□□□□□ -2.3
TREX1Q9NSU2 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
TREX1Q9NSU2 AC008163.1-202ENST00000636004 2889 ntBASIC0.7□□□□□ -2.3
TREX1Q9NSU2 RNU5F-3P-201ENST00000363767 117 ntBASIC0.69□□□□□ -2.3
TREX1Q9NSU2 SNORD41-201ENST00000386967 70 ntBASIC0.69□□□□□ -2.3
TREX1Q9NSU2 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.69□□□□□ -2.3
TREX1Q9NSU2 Y_RNA.615-201ENST00000410769 117 ntBASIC0.69□□□□□ -2.3
TREX1Q9NSU2 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.69□□□□□ -2.3
TREX1Q9NSU2 CALM2P4-201ENST00000430810 426 ntBASIC0.69□□□□□ -2.3
TREX1Q9NSU2 SEPT14P3-201ENST00000439401 183 ntBASIC0.69□□□□□ -2.3
TREX1Q9NSU2 AL732372.2-207ENST00000445840 183 ntBASIC0.69□□□□□ -2.3
TREX1Q9NSU2 MRPS10P1-201ENST00000448483 130 ntBASIC0.69□□□□□ -2.3
TREX1Q9NSU2 SEPT14P2-201ENST00000453405 183 ntBASIC0.69□□□□□ -2.3
TREX1Q9NSU2 MTND1P11-201ENST00000456661 876 ntBASIC0.69□□□□□ -2.3
TREX1Q9NSU2 SEPT14P4-201ENST00000513445 186 ntBASIC0.69□□□□□ -2.3
TREX1Q9NSU2 RNA5SP480-201ENST00000516840 109 ntBASIC0.69□□□□□ -2.3
TREX1Q9NSU2 AC090142.3-201ENST00000519012 385 ntBASIC0.69□□□□□ -2.3
TREX1Q9NSU2 FO082796.1-201ENST00000523795 183 ntBASIC0.69□□□□□ -2.3
TREX1Q9NSU2 MIR5000-201ENST00000577717 103 ntBASIC0.69□□□□□ -2.3
TREX1Q9NSU2 AC010620.1-201ENST00000601088 1102 ntBASIC0.69□□□□□ -2.3
TREX1Q9NSU2 AC124864.2-201ENST00000624736 186 ntBASIC0.69□□□□□ -2.3
TREX1Q9NSU2 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.69□□□□□ -2.3
TREX1Q9NSU2 MIR6079-201ENST00000635807 62 ntBASIC0.69□□□□□ -2.3
TREX1Q9NSU2 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
TREX1Q9NSU2 RNU6-137P-201ENST00000363680 108 ntBASIC0.68□□□□□ -2.3
TREX1Q9NSU2 Y_RNA.267-201ENST00000364679 109 ntBASIC0.68□□□□□ -2.3
TREX1Q9NSU2 Y_RNA.363-201ENST00000365529 113 ntBASIC0.68□□□□□ -2.3
TREX1Q9NSU2 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
TREX1Q9NSU2 RNU6-259P-201ENST00000383999 107 ntBASIC0.68□□□□□ -2.3
TREX1Q9NSU2 RNU6-1119P-201ENST00000384349 108 ntBASIC0.68□□□□□ -2.3
TREX1Q9NSU2 MIR608-201ENST00000384820 100 ntBASIC0.68□□□□□ -2.3
TREX1Q9NSU2 MIR200A-201ENST00000384875 90 ntBASIC0.68□□□□□ -2.3
TREX1Q9NSU2 MIR100-201ENST00000385259 80 ntBASIC0.68□□□□□ -2.3
TREX1Q9NSU2 MIR653-201ENST00000385279 96 ntBASIC0.68□□□□□ -2.3
TREX1Q9NSU2 U8.16-201ENST00000391279 133 ntBASIC0.68□□□□□ -2.3
TREX1Q9NSU2 AC006461.1-201ENST00000412637 326 ntBASIC0.68□□□□□ -2.3
TREX1Q9NSU2 AC114482.1-201ENST00000418010 247 ntBASIC0.68□□□□□ -2.3
TREX1Q9NSU2 DAP3P1-201ENST00000441522 278 ntBASIC0.68□□□□□ -2.3
TREX1Q9NSU2 AC117454.1-201ENST00000491120 168 ntBASIC0.68□□□□□ -2.3
TREX1Q9NSU2 RNU7-12P-201ENST00000516030 62 ntBASIC0.68□□□□□ -2.3
TREX1Q9NSU2 RNU6-917P-201ENST00000516294 104 ntBASIC0.68□□□□□ -2.3
TREX1Q9NSU2 Y_RNA.693-201ENST00000516641 110 ntBASIC0.68□□□□□ -2.3
TREX1Q9NSU2 RNU2-56P-201ENST00000516826 190 ntBASIC0.68□□□□□ -2.3
TREX1Q9NSU2 RNU7-172P-201ENST00000517125 64 ntBASIC0.68□□□□□ -2.3
TREX1Q9NSU2 AC091144.1-201ENST00000519573 138 ntBASIC0.68□□□□□ -2.3
TREX1Q9NSU2 AL590705.4-201ENST00000532209 134 ntBASIC0.68□□□□□ -2.3
TREX1Q9NSU2 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.68□□□□□ -2.3
TREX1Q9NSU2 RPL21P9-201ENST00000556149 474 ntBASIC0.68□□□□□ -2.3
TREX1Q9NSU2 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.68□□□□□ -2.3
TREX1Q9NSU2 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
TREX1Q9NSU2 RNU6-17P-201ENST00000384245 107 ntBASIC0.67□□□□□ -2.3
TREX1Q9NSU2 SNORA80D-201ENST00000384488 135 ntBASIC0.67□□□□□ -2.3
TREX1Q9NSU2 RNU6-18P-201ENST00000384527 107 ntBASIC0.67□□□□□ -2.3
TREX1Q9NSU2 AF228730.1-201ENST00000397972 663 ntBASIC0.67□□□□□ -2.3
TREX1Q9NSU2 MIR942-201ENST00000401111 86 ntBASIC0.67□□□□□ -2.3
TREX1Q9NSU2 MTND5P15-201ENST00000434246 349 ntBASIC0.67□□□□□ -2.3
TREX1Q9NSU2 AC010598.1-201ENST00000510378 103 ntBASIC0.67□□□□□ -2.3
TREX1Q9NSU2 AC010486.3-201ENST00000511602 785 ntBASIC0.67□□□□□ -2.3
TREX1Q9NSU2 RNU6-1281P-201ENST00000516223 105 ntBASIC0.67□□□□□ -2.3
TREX1Q9NSU2 RNU6-197P-201ENST00000516680 100 ntBASIC0.67□□□□□ -2.3
TREX1Q9NSU2 Y_RNA.704-201ENST00000516851 102 ntBASIC0.67□□□□□ -2.3
TREX1Q9NSU2 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.67□□□□□ -2.3
TREX1Q9NSU2 AL121579.1-201ENST00000555129 305 ntBASIC0.67□□□□□ -2.3
TREX1Q9NSU2 CYP3A137P-201ENST00000562436 69 ntBASIC0.67□□□□□ -2.3
TREX1Q9NSU2 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.67□□□□□ -2.3
TREX1Q9NSU2 AL357312.1-201ENST00000603879 298 ntBASIC0.67□□□□□ -2.3
TREX1Q9NSU2 AC010999.1-201ENST00000611856 324 ntBASIC0.67□□□□□ -2.3
TREX1Q9NSU2 DISC2.1-201ENST00000612827 205 ntBASIC0.67□□□□□ -2.3
TREX1Q9NSU2 AC068137.3-201ENST00000639191 341 ntBASIC0.67□□□□□ -2.3
TREX1Q9NSU2 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms