Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 AL390123.1-201ENST00000603216 237 ntBASIC0.98□□□□□ -2.25
HMG20AQ9NP66 AC100812.1-201ENST00000607622 580 ntBASIC0.98□□□□□ -2.25
HMG20AQ9NP66 RNA5SP259-201ENST00000365541 109 ntBASIC0.97□□□□□ -2.25
HMG20AQ9NP66 Y_RNA.557-201ENST00000384680 107 ntBASIC0.97□□□□□ -2.25
HMG20AQ9NP66 RNU6-1031P-201ENST00000384773 107 ntBASIC0.97□□□□□ -2.25
HMG20AQ9NP66 MIR329-1-201ENST00000385028 80 ntBASIC0.97□□□□□ -2.25
HMG20AQ9NP66 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
HMG20AQ9NP66 RNU6-510P-201ENST00000391239 108 ntBASIC0.97□□□□□ -2.25
HMG20AQ9NP66 RNU1-139P-201ENST00000391307 165 ntBASIC0.97□□□□□ -2.25
HMG20AQ9NP66 MIR190B-201ENST00000401119 79 ntBASIC0.97□□□□□ -2.25
HMG20AQ9NP66 RNU4-14P-201ENST00000410858 122 ntBASIC0.97□□□□□ -2.25
HMG20AQ9NP66 FCF1P9-201ENST00000412546 282 ntBASIC0.97□□□□□ -2.25
HMG20AQ9NP66 ELOCP21-201ENST00000412558 336 ntBASIC0.97□□□□□ -2.25
HMG20AQ9NP66 EIF1P1-201ENST00000421436 341 ntBASIC0.97□□□□□ -2.25
HMG20AQ9NP66 USMG5P1-201ENST00000425964 177 ntBASIC0.97□□□□□ -2.25
HMG20AQ9NP66 EIF1P2-201ENST00000428233 350 ntBASIC0.97□□□□□ -2.25
HMG20AQ9NP66 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.97□□□□□ -2.25
HMG20AQ9NP66 MTND1P34-201ENST00000438556 671 ntBASIC0.97□□□□□ -2.25
HMG20AQ9NP66 DYNLT3P2-201ENST00000442517 295 ntBASIC0.97□□□□□ -2.25
HMG20AQ9NP66 MTND4P17-201ENST00000470444 350 ntBASIC0.97□□□□□ -2.25
HMG20AQ9NP66 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.97□□□□□ -2.25
HMG20AQ9NP66 Y_RNA.683-201ENST00000516508 93 ntBASIC0.97□□□□□ -2.25
HMG20AQ9NP66 RNU6-358P-201ENST00000516564 75 ntBASIC0.97□□□□□ -2.25
HMG20AQ9NP66 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC0.97□□□□□ -2.25
HMG20AQ9NP66 AC005668.1-201ENST00000571142 476 ntBASIC0.97□□□□□ -2.25
HMG20AQ9NP66 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC0.97□□□□□ -2.25
HMG20AQ9NP66 MIR4524B-201ENST00000581569 115 ntBASIC0.97□□□□□ -2.25
HMG20AQ9NP66 MIR4438-201ENST00000585271 93 ntBASIC0.97□□□□□ -2.25
HMG20AQ9NP66 AC060780.3-201ENST00000589464 80 ntBASIC0.97□□□□□ -2.25
HMG20AQ9NP66 AL121890.5-201ENST00000620848 304 ntBASIC0.97□□□□□ -2.25
HMG20AQ9NP66 Y_RNA.88-201ENST00000363029 99 ntBASIC0.96□□□□□ -2.26
HMG20AQ9NP66 RNY1P16-201ENST00000363063 111 ntBASIC0.96□□□□□ -2.26
HMG20AQ9NP66 Y_RNA.490-201ENST00000384413 102 ntBASIC0.96□□□□□ -2.26
HMG20AQ9NP66 RNU6-601P-201ENST00000384540 107 ntBASIC0.96□□□□□ -2.26
HMG20AQ9NP66 RNU6-440P-201ENST00000390882 105 ntBASIC0.96□□□□□ -2.26
HMG20AQ9NP66 AL355796.1-201ENST00000406706 323 ntBASIC0.96□□□□□ -2.26
HMG20AQ9NP66 AC074085.1-201ENST00000413598 418 ntBASIC0.96□□□□□ -2.26
HMG20AQ9NP66 AP1B1P2-201ENST00000416196 106 ntBASIC0.96□□□□□ -2.26
HMG20AQ9NP66 BTF3P4-201ENST00000418852 495 ntBASIC0.96□□□□□ -2.26
HMG20AQ9NP66 AC245047.3-201ENST00000429428 127 ntBASIC0.96□□□□□ -2.26
HMG20AQ9NP66 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.96□□□□□ -2.26
HMG20AQ9NP66 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC0.96□□□□□ -2.26
HMG20AQ9NP66 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.96□□□□□ -2.26
HMG20AQ9NP66 RPS27P22-201ENST00000478056 241 ntBASIC0.96□□□□□ -2.26
HMG20AQ9NP66 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC0.96□□□□□ -2.26
HMG20AQ9NP66 AC010469.2-201ENST00000496412 480 ntBASIC0.96□□□□□ -2.26
HMG20AQ9NP66 SCARNA16.2-201ENST00000516520 172 ntBASIC0.96□□□□□ -2.26
HMG20AQ9NP66 RNU7-30P-201ENST00000516835 62 ntBASIC0.96□□□□□ -2.26
HMG20AQ9NP66 AP002001.1-203ENST00000534002 267 ntBASIC0.96□□□□□ -2.26
HMG20AQ9NP66 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.96□□□□□ -2.26
HMG20AQ9NP66 AL137100.2-201ENST00000555786 315 ntBASIC0.96□□□□□ -2.26
HMG20AQ9NP66 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.96□□□□□ -2.26
HMG20AQ9NP66 AC022432.1-201ENST00000595739 310 ntBASIC0.96□□□□□ -2.26
HMG20AQ9NP66 AL021879.1-201ENST00000611756 288 ntBASIC0.96□□□□□ -2.26
HMG20AQ9NP66 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.96□□□□□ -2.26
HMG20AQ9NP66 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC0.96□□□□□ -2.26
HMG20AQ9NP66 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.96□□□□□ -2.26
HMG20AQ9NP66 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.96□□□□□ -2.26
HMG20AQ9NP66 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.95□□□□□ -2.26
HMG20AQ9NP66 AC018630.2-201ENST00000534866 2403 ntBASIC0.95□□□□□ -2.26
HMG20AQ9NP66 RNA5SP99-201ENST00000364020 114 ntBASIC0.95□□□□□ -2.26
HMG20AQ9NP66 SNORA25.8-201ENST00000364831 128 ntBASIC0.95□□□□□ -2.26
HMG20AQ9NP66 RNU6-482P-201ENST00000391068 107 ntBASIC0.95□□□□□ -2.26
HMG20AQ9NP66 RNU6-1304P-201ENST00000411374 106 ntBASIC0.95□□□□□ -2.26
HMG20AQ9NP66 AC046134.1-201ENST00000514454 666 ntBASIC0.95□□□□□ -2.26
HMG20AQ9NP66 RNU7-99P-201ENST00000516271 62 ntBASIC0.95□□□□□ -2.26
HMG20AQ9NP66 Y_RNA.708-201ENST00000516950 96 ntBASIC0.95□□□□□ -2.26
HMG20AQ9NP66 AC105029.1-201ENST00000520250 669 ntBASIC0.95□□□□□ -2.26
HMG20AQ9NP66 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.95□□□□□ -2.26
HMG20AQ9NP66 AC011712.1-201ENST00000588959 234 ntBASIC0.95□□□□□ -2.26
HMG20AQ9NP66 AC040896.1-201ENST00000613819 479 ntBASIC0.95□□□□□ -2.26
HMG20AQ9NP66 AL157834.3-201ENST00000615543 103 ntBASIC0.95□□□□□ -2.26
HMG20AQ9NP66 AL359757.2-201ENST00000624309 274 ntBASIC0.95□□□□□ -2.26
HMG20AQ9NP66 AC068137.4-201ENST00000638485 296 ntBASIC0.95□□□□□ -2.26
HMG20AQ9NP66 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC0.95□□□□□ -2.26
HMG20AQ9NP66 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
HMG20AQ9NP66 RNA5SP327-201ENST00000362494 101 ntBASIC0.94□□□□□ -2.26
HMG20AQ9NP66 RNU6-1266P-201ENST00000362794 105 ntBASIC0.94□□□□□ -2.26
HMG20AQ9NP66 RNU6-879P-201ENST00000364328 108 ntBASIC0.94□□□□□ -2.26
HMG20AQ9NP66 Y_RNA.358-201ENST00000365491 99 ntBASIC0.94□□□□□ -2.26
HMG20AQ9NP66 Y_RNA.364-201ENST00000365532 101 ntBASIC0.94□□□□□ -2.26
HMG20AQ9NP66 SNORA20B-201ENST00000384220 132 ntBASIC0.94□□□□□ -2.26
HMG20AQ9NP66 RNU6-1145P-201ENST00000384246 107 ntBASIC0.94□□□□□ -2.26
HMG20AQ9NP66 RNU6-318P-201ENST00000384283 103 ntBASIC0.94□□□□□ -2.26
HMG20AQ9NP66 RNU6-192P-201ENST00000391253 100 ntBASIC0.94□□□□□ -2.26
HMG20AQ9NP66 MRPL42P3-201ENST00000401492 326 ntBASIC0.94□□□□□ -2.26
HMG20AQ9NP66 RPL37P10-201ENST00000412884 288 ntBASIC0.94□□□□□ -2.26
HMG20AQ9NP66 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC0.94□□□□□ -2.26
HMG20AQ9NP66 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.94□□□□□ -2.26
HMG20AQ9NP66 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.94□□□□□ -2.26
HMG20AQ9NP66 MRPS10P1-201ENST00000448483 130 ntBASIC0.94□□□□□ -2.26
HMG20AQ9NP66 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC0.94□□□□□ -2.26
HMG20AQ9NP66 AL133373.1-201ENST00000497098 94 ntBASIC0.94□□□□□ -2.26
HMG20AQ9NP66 AC093852.1-201ENST00000503587 266 ntBASIC0.94□□□□□ -2.26
HMG20AQ9NP66 AC022868.1-201ENST00000517767 391 ntBASIC0.94□□□□□ -2.26
HMG20AQ9NP66 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.94□□□□□ -2.26
HMG20AQ9NP66 APOOP3-201ENST00000536787 586 ntBASIC0.94□□□□□ -2.26
HMG20AQ9NP66 AL512310.8-201ENST00000550183 120 ntBASIC0.94□□□□□ -2.26
HMG20AQ9NP66 AL121579.1-201ENST00000555129 305 ntBASIC0.94□□□□□ -2.26
HMG20AQ9NP66 AC090617.3-201ENST00000573670 475 ntBASIC0.94□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms