Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 Y_RNA.287-201ENST00000364853 94 ntBASIC1.93□□□□□ -2.1
BRF2Q9HAW0 RNU6-20P-201ENST00000384106 107 ntBASIC1.93□□□□□ -2.1
BRF2Q9HAW0 Y_RNA.471-201ENST00000384312 102 ntBASIC1.93□□□□□ -2.1
BRF2Q9HAW0 MIR23A-201ENST00000385245 73 ntBASIC1.93□□□□□ -2.1
BRF2Q9HAW0 RNU6-101P-201ENST00000410323 104 ntBASIC1.93□□□□□ -2.1
BRF2Q9HAW0 AL139156.1-201ENST00000412785 841 ntBASIC1.93□□□□□ -2.1
BRF2Q9HAW0 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.93□□□□□ -2.1
BRF2Q9HAW0 SNORD65B-201ENST00000459126 73 ntBASIC1.93□□□□□ -2.1
BRF2Q9HAW0 AL163540.1-201ENST00000485382 386 ntBASIC1.93□□□□□ -2.1
BRF2Q9HAW0 AC010409.1-201ENST00000487382 476 ntBASIC1.93□□□□□ -2.1
BRF2Q9HAW0 RNU1-142P-201ENST00000516682 145 ntBASIC1.93□□□□□ -2.1
BRF2Q9HAW0 Y_RNA.713-201ENST00000517013 96 ntBASIC1.93□□□□□ -2.1
BRF2Q9HAW0 MIR3171-201ENST00000584270 74 ntBASIC1.93□□□□□ -2.1
BRF2Q9HAW0 MIR4448-201ENST00000584360 86 ntBASIC1.93□□□□□ -2.1
BRF2Q9HAW0 AL356055.1-201ENST00000602528 446 ntBASIC1.93□□□□□ -2.1
BRF2Q9HAW0 AC124312.5-201ENST00000604451 268 ntBASIC1.93□□□□□ -2.1
BRF2Q9HAW0 AL121655.1-201ENST00000605811 308 ntBASIC1.93□□□□□ -2.1
BRF2Q9HAW0 AL359075.3-201ENST00000613288 217 ntBASIC1.93□□□□□ -2.1
BRF2Q9HAW0 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
BRF2Q9HAW0 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
BRF2Q9HAW0 MIR449A-201ENST00000362113 91 ntBASIC1.92□□□□□ -2.1
BRF2Q9HAW0 Y_RNA.202-201ENST00000364083 110 ntBASIC1.92□□□□□ -2.1
BRF2Q9HAW0 RNA5SP138-201ENST00000365098 114 ntBASIC1.92□□□□□ -2.1
BRF2Q9HAW0 RNU6-407P-201ENST00000365280 104 ntBASIC1.92□□□□□ -2.1
BRF2Q9HAW0 SNORA22B-201ENST00000383876 138 ntBASIC1.92□□□□□ -2.1
BRF2Q9HAW0 Y_RNA.389-201ENST00000383924 113 ntBASIC1.92□□□□□ -2.1
BRF2Q9HAW0 Y_RNA.439-201ENST00000384119 94 ntBASIC1.92□□□□□ -2.1
BRF2Q9HAW0 RNU11-5P-201ENST00000391216 129 ntBASIC1.92□□□□□ -2.1
BRF2Q9HAW0 RNA5SP467-201ENST00000391274 118 ntBASIC1.92□□□□□ -2.1
BRF2Q9HAW0 AL354751.2-201ENST00000415471 210 ntBASIC1.92□□□□□ -2.1
BRF2Q9HAW0 AL445646.1-201ENST00000431784 216 ntBASIC1.92□□□□□ -2.1
BRF2Q9HAW0 FTH1P12-201ENST00000432137 551 ntBASIC1.92□□□□□ -2.1
BRF2Q9HAW0 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.92□□□□□ -2.1
BRF2Q9HAW0 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
BRF2Q9HAW0 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.92□□□□□ -2.1
BRF2Q9HAW0 SUMO1P2-201ENST00000452524 304 ntBASIC1.92□□□□□ -2.1
BRF2Q9HAW0 U8.20-201ENST00000459445 131 ntBASIC1.92□□□□□ -2.1
BRF2Q9HAW0 RPL26P26-201ENST00000480251 434 ntBASIC1.92□□□□□ -2.1
BRF2Q9HAW0 AC023157.2-201ENST00000540596 141 ntBASIC1.92□□□□□ -2.1
BRF2Q9HAW0 MIR6852-201ENST00000621699 66 ntBASIC1.92□□□□□ -2.1
BRF2Q9HAW0 AC064859.1-201ENST00000624741 174 ntBASIC1.92□□□□□ -2.1
BRF2Q9HAW0 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
BRF2Q9HAW0 RNU6-271P-201ENST00000363858 105 ntBASIC1.91□□□□□ -2.1
BRF2Q9HAW0 AC117470.1-201ENST00000381974 330 ntBASIC1.91□□□□□ -2.1
BRF2Q9HAW0 SNORA20B-201ENST00000384220 132 ntBASIC1.91□□□□□ -2.1
BRF2Q9HAW0 SNORA64-201ENST00000384674 134 ntBASIC1.91□□□□□ -2.1
BRF2Q9HAW0 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
BRF2Q9HAW0 MRPL42P3-201ENST00000401492 326 ntBASIC1.91□□□□□ -2.1
BRF2Q9HAW0 AL023284.1-201ENST00000403956 276 ntBASIC1.91□□□□□ -2.1
BRF2Q9HAW0 RNA5SP338-201ENST00000410495 85 ntBASIC1.91□□□□□ -2.1
BRF2Q9HAW0 RN7SKP223-201ENST00000410582 62 ntBASIC1.91□□□□□ -2.1
BRF2Q9HAW0 Z98742.3-201ENST00000418637 326 ntBASIC1.91□□□□□ -2.1
BRF2Q9HAW0 DPH3P2-201ENST00000422618 250 ntBASIC1.91□□□□□ -2.1
BRF2Q9HAW0 AC005534.2-201ENST00000431047 433 ntBASIC1.91□□□□□ -2.1
BRF2Q9HAW0 AC245047.4-201ENST00000433189 144 ntBASIC1.91□□□□□ -2.1
BRF2Q9HAW0 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.91□□□□□ -2.1
BRF2Q9HAW0 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.91□□□□□ -2.1
BRF2Q9HAW0 RPL36AP21-201ENST00000490372 323 ntBASIC1.91□□□□□ -2.1
BRF2Q9HAW0 RNU6-1153P-201ENST00000516760 105 ntBASIC1.91□□□□□ -2.1
BRF2Q9HAW0 SNORA31.17-201ENST00000516953 127 ntBASIC1.91□□□□□ -2.1
BRF2Q9HAW0 Y_RNA.711-201ENST00000516993 102 ntBASIC1.91□□□□□ -2.1
BRF2Q9HAW0 Y_RNA.721-201ENST00000517207 102 ntBASIC1.91□□□□□ -2.1
BRF2Q9HAW0 AP002001.1-203ENST00000534002 267 ntBASIC1.91□□□□□ -2.1
BRF2Q9HAW0 AC084364.2-201ENST00000546924 395 ntBASIC1.91□□□□□ -2.1
BRF2Q9HAW0 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.91□□□□□ -2.1
BRF2Q9HAW0 MIR4438-201ENST00000585271 93 ntBASIC1.91□□□□□ -2.1
BRF2Q9HAW0 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.91□□□□□ -2.1
BRF2Q9HAW0 Y_RNA.111-201ENST00000363248 100 ntBASIC1.9□□□□□ -2.11
BRF2Q9HAW0 SNORA33-201ENST00000363664 130 ntBASIC1.9□□□□□ -2.11
BRF2Q9HAW0 SNORA63D-201ENST00000364359 132 ntBASIC1.9□□□□□ -2.11
BRF2Q9HAW0 Y_RNA.458-201ENST00000384240 102 ntBASIC1.9□□□□□ -2.11
BRF2Q9HAW0 AC008413.1-201ENST00000511864 177 ntBASIC1.9□□□□□ -2.11
BRF2Q9HAW0 MIR3198-2-201ENST00000577868 80 ntBASIC1.9□□□□□ -2.11
BRF2Q9HAW0 MIR4435-1-201ENST00000582552 80 ntBASIC1.9□□□□□ -2.11
BRF2Q9HAW0 AC016925.2-201ENST00000605108 242 ntBASIC1.9□□□□□ -2.11
BRF2Q9HAW0 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.9□□□□□ -2.11
BRF2Q9HAW0 U6.115-201ENST00000636045 103 ntBASIC1.9□□□□□ -2.11
BRF2Q9HAW0 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
BRF2Q9HAW0 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.89□□□□□ -2.11
BRF2Q9HAW0 RNU6-324P-201ENST00000363957 106 ntBASIC1.89□□□□□ -2.11
BRF2Q9HAW0 Y_RNA.216-201ENST00000364205 93 ntBASIC1.89□□□□□ -2.11
BRF2Q9HAW0 RNU6-454P-201ENST00000364292 107 ntBASIC1.89□□□□□ -2.11
BRF2Q9HAW0 Y_RNA.230-201ENST00000364348 109 ntBASIC1.89□□□□□ -2.11
BRF2Q9HAW0 RNU6-296P-201ENST00000384608 107 ntBASIC1.89□□□□□ -2.11
BRF2Q9HAW0 RNU6-950P-201ENST00000384651 107 ntBASIC1.89□□□□□ -2.11
BRF2Q9HAW0 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
BRF2Q9HAW0 AL079342.1-201ENST00000401460 267 ntBASIC1.89□□□□□ -2.11
BRF2Q9HAW0 SNORA3.2-201ENST00000408221 125 ntBASIC1.89□□□□□ -2.11
BRF2Q9HAW0 RNA5SP489-201ENST00000410986 109 ntBASIC1.89□□□□□ -2.11
BRF2Q9HAW0 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.89□□□□□ -2.11
BRF2Q9HAW0 AC010154.1-201ENST00000425857 269 ntBASIC1.89□□□□□ -2.11
BRF2Q9HAW0 AC025465.3-201ENST00000510570 311 ntBASIC1.89□□□□□ -2.11
BRF2Q9HAW0 RNU6-155P-201ENST00000516347 100 ntBASIC1.89□□□□□ -2.11
BRF2Q9HAW0 AC022616.4-201ENST00000522985 181 ntBASIC1.89□□□□□ -2.11
BRF2Q9HAW0 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
BRF2Q9HAW0 AC020661.2-201ENST00000560114 134 ntBASIC1.89□□□□□ -2.11
BRF2Q9HAW0 MIR5089-201ENST00000580047 84 ntBASIC1.89□□□□□ -2.11
BRF2Q9HAW0 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.89□□□□□ -2.11
BRF2Q9HAW0 Y_RNA.783-201ENST00000613546 102 ntBASIC1.89□□□□□ -2.11
BRF2Q9HAW0 AC040896.1-201ENST00000613819 479 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 143.4 ms