Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 IFNA11P-201ENST00000446352 526 ntBASIC2.3□□□□□ -2.04
CDT1Q9H211 RPS23P5-201ENST00000495419 428 ntBASIC2.3□□□□□ -2.04
CDT1Q9H211 RNA5SP402-201ENST00000517148 110 ntBASIC2.3□□□□□ -2.04
CDT1Q9H211 AC018448.1-201ENST00000552843 316 ntBASIC2.3□□□□□ -2.04
CDT1Q9H211 AC141273.2-201ENST00000618989 130 ntBASIC2.3□□□□□ -2.04
CDT1Q9H211 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
CDT1Q9H211 MIR219B-201ENST00000637023 88 ntBASIC2.3□□□□□ -2.04
CDT1Q9H211 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.29□□□□□ -2.04
CDT1Q9H211 Y_RNA.54-201ENST00000362766 105 ntBASIC2.29□□□□□ -2.04
CDT1Q9H211 Y_RNA.76-201ENST00000362931 109 ntBASIC2.29□□□□□ -2.04
CDT1Q9H211 SNORD87-201ENST00000364849 89 ntBASIC2.29□□□□□ -2.04
CDT1Q9H211 RNU6-1175P-201ENST00000365200 107 ntBASIC2.29□□□□□ -2.04
CDT1Q9H211 SNORA25B-201ENST00000365507 128 ntBASIC2.29□□□□□ -2.04
CDT1Q9H211 Y_RNA.415-201ENST00000384012 112 ntBASIC2.29□□□□□ -2.04
CDT1Q9H211 Y_RNA.462-201ENST00000384268 102 ntBASIC2.29□□□□□ -2.04
CDT1Q9H211 RNU6-847P-201ENST00000411115 108 ntBASIC2.29□□□□□ -2.04
CDT1Q9H211 RNA5SP247-201ENST00000411181 105 ntBASIC2.29□□□□□ -2.04
CDT1Q9H211 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.29□□□□□ -2.04
CDT1Q9H211 AC009237.7-201ENST00000447357 229 ntBASIC2.29□□□□□ -2.04
CDT1Q9H211 RNU7-14P-201ENST00000459331 62 ntBASIC2.29□□□□□ -2.04
CDT1Q9H211 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.29□□□□□ -2.04
CDT1Q9H211 ATP5EP1-201ENST00000510257 156 ntBASIC2.29□□□□□ -2.04
CDT1Q9H211 AC233702.2-202ENST00000562547 291 ntBASIC2.29□□□□□ -2.04
CDT1Q9H211 AC008749.1-201ENST00000597650 306 ntBASIC2.29□□□□□ -2.04
CDT1Q9H211 AL109918.3-201ENST00000603072 338 ntBASIC2.29□□□□□ -2.04
CDT1Q9H211 RPL17P51-201ENST00000605218 238 ntBASIC2.29□□□□□ -2.04
CDT1Q9H211 MIR203B-201ENST00000636080 86 ntBASIC2.29□□□□□ -2.04
CDT1Q9H211 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.29□□□□□ -2.04
CDT1Q9H211 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
CDT1Q9H211 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.28□□□□□ -2.04
CDT1Q9H211 RNU1-62P-201ENST00000362599 164 ntBASIC2.28□□□□□ -2.04
CDT1Q9H211 RNU6-1266P-201ENST00000362794 105 ntBASIC2.28□□□□□ -2.04
CDT1Q9H211 Y_RNA.418-201ENST00000384029 102 ntBASIC2.28□□□□□ -2.04
CDT1Q9H211 RNU6-793P-201ENST00000384233 104 ntBASIC2.28□□□□□ -2.04
CDT1Q9H211 Y_RNA.552-201ENST00000384665 112 ntBASIC2.28□□□□□ -2.04
CDT1Q9H211 SNORD58.1-201ENST00000391313 66 ntBASIC2.28□□□□□ -2.04
CDT1Q9H211 AL033519.2-201ENST00000403958 392 ntBASIC2.28□□□□□ -2.04
CDT1Q9H211 Y_RNA.595-201ENST00000410403 105 ntBASIC2.28□□□□□ -2.04
CDT1Q9H211 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.28□□□□□ -2.04
CDT1Q9H211 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.28□□□□□ -2.04
CDT1Q9H211 Y_RNA.683-201ENST00000516508 93 ntBASIC2.28□□□□□ -2.04
CDT1Q9H211 RNU7-110P-201ENST00000516891 62 ntBASIC2.28□□□□□ -2.04
CDT1Q9H211 RNU6-548P-201ENST00000517083 115 ntBASIC2.28□□□□□ -2.04
CDT1Q9H211 RNU6-667P-201ENST00000517186 102 ntBASIC2.28□□□□□ -2.04
CDT1Q9H211 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.28□□□□□ -2.04
CDT1Q9H211 RPL21P9-201ENST00000556149 474 ntBASIC2.28□□□□□ -2.04
CDT1Q9H211 AC015712.3-201ENST00000559380 164 ntBASIC2.28□□□□□ -2.04
CDT1Q9H211 MIR5002-201ENST00000584713 97 ntBASIC2.28□□□□□ -2.04
CDT1Q9H211 AC011373.1-201ENST00000607270 237 ntBASIC2.28□□□□□ -2.04
CDT1Q9H211 AC004467.1-201ENST00000615678 330 ntBASIC2.28□□□□□ -2.04
CDT1Q9H211 AC127459.3-201ENST00000624328 466 ntBASIC2.28□□□□□ -2.04
CDT1Q9H211 U6.104-201ENST00000637979 90 ntBASIC2.28□□□□□ -2.04
CDT1Q9H211 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
CDT1Q9H211 RNU5F-3P-201ENST00000363767 117 ntBASIC2.27□□□□□ -2.05
CDT1Q9H211 RNU6-454P-201ENST00000364292 107 ntBASIC2.27□□□□□ -2.05
CDT1Q9H211 Y_RNA.238-201ENST00000364441 102 ntBASIC2.27□□□□□ -2.05
CDT1Q9H211 RNU6-290P-201ENST00000365212 101 ntBASIC2.27□□□□□ -2.05
CDT1Q9H211 RNU2-2P-201ENST00000410396 191 ntBASIC2.27□□□□□ -2.05
CDT1Q9H211 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.27□□□□□ -2.05
CDT1Q9H211 AL139156.1-201ENST00000412785 841 ntBASIC2.27□□□□□ -2.05
CDT1Q9H211 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.27□□□□□ -2.05
CDT1Q9H211 Z98949.2-201ENST00000440996 144 ntBASIC2.27□□□□□ -2.05
CDT1Q9H211 AC009238.1-201ENST00000442165 424 ntBASIC2.27□□□□□ -2.05
CDT1Q9H211 AC009237.6-201ENST00000446969 424 ntBASIC2.27□□□□□ -2.05
CDT1Q9H211 MRPS10P1-201ENST00000448483 130 ntBASIC2.27□□□□□ -2.05
CDT1Q9H211 HMGN2P18-201ENST00000450680 270 ntBASIC2.27□□□□□ -2.05
CDT1Q9H211 AC007395.1-201ENST00000451333 677 ntBASIC2.27□□□□□ -2.05
CDT1Q9H211 AC104435.1-201ENST00000483483 166 ntBASIC2.27□□□□□ -2.05
CDT1Q9H211 SEPT14P8-201ENST00000508026 178 ntBASIC2.27□□□□□ -2.05
CDT1Q9H211 SERF1AP1-201ENST00000514575 187 ntBASIC2.27□□□□□ -2.05
CDT1Q9H211 RNU6-138P-201ENST00000515952 107 ntBASIC2.27□□□□□ -2.05
CDT1Q9H211 RNU6-344P-201ENST00000516635 111 ntBASIC2.27□□□□□ -2.05
CDT1Q9H211 RNU1-117P-201ENST00000517041 158 ntBASIC2.27□□□□□ -2.05
CDT1Q9H211 PRELID2P1-201ENST00000552837 301 ntBASIC2.27□□□□□ -2.05
CDT1Q9H211 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.27□□□□□ -2.05
CDT1Q9H211 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.27□□□□□ -2.05
CDT1Q9H211 AC009127.3-201ENST00000570531 403 ntBASIC2.27□□□□□ -2.05
CDT1Q9H211 AC130289.1-201ENST00000577321 73 ntBASIC2.27□□□□□ -2.05
CDT1Q9H211 SNORD14A-201ENST00000606526 91 ntBASIC2.27□□□□□ -2.05
CDT1Q9H211 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.27□□□□□ -2.05
CDT1Q9H211 U2.15-201ENST00000611544 191 ntBASIC2.27□□□□□ -2.05
CDT1Q9H211 U2.16-201ENST00000613119 191 ntBASIC2.27□□□□□ -2.05
CDT1Q9H211 U2.12-201ENST00000613778 191 ntBASIC2.27□□□□□ -2.05
CDT1Q9H211 U2.20-201ENST00000613956 192 ntBASIC2.27□□□□□ -2.05
CDT1Q9H211 U2.9-201ENST00000615427 191 ntBASIC2.27□□□□□ -2.05
CDT1Q9H211 U2.11-201ENST00000616345 191 ntBASIC2.27□□□□□ -2.05
CDT1Q9H211 U2.2-201ENST00000616535 191 ntBASIC2.27□□□□□ -2.05
CDT1Q9H211 U2.3-201ENST00000617785 191 ntBASIC2.27□□□□□ -2.05
CDT1Q9H211 U2.19-201ENST00000618602 191 ntBASIC2.27□□□□□ -2.05
CDT1Q9H211 RNU2-1-201ENST00000618664 191 ntBASIC2.27□□□□□ -2.05
CDT1Q9H211 U2.6-201ENST00000619225 191 ntBASIC2.27□□□□□ -2.05
CDT1Q9H211 U2.5-201ENST00000619465 191 ntBASIC2.27□□□□□ -2.05
CDT1Q9H211 U2.10-201ENST00000620268 191 ntBASIC2.27□□□□□ -2.05
CDT1Q9H211 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.27□□□□□ -2.05
CDT1Q9H211 AC092881.1-201ENST00000638218 2733 ntBASIC2.27□□□□□ -2.05
CDT1Q9H211 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
CDT1Q9H211 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
CDT1Q9H211 RNU6-545P-201ENST00000362681 104 ntBASIC2.26□□□□□ -2.05
CDT1Q9H211 RNU4-90P-201ENST00000362773 141 ntBASIC2.26□□□□□ -2.05
CDT1Q9H211 Y_RNA.117-201ENST00000363294 101 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms