Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AP003461.1-201ENST00000528866 78 ntBASIC0.15□□□□□ -2.39
UPF3BQ9BZI7 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC0.15□□□□□ -2.39
UPF3BQ9BZI7 ELOCP32-201ENST00000548625 324 ntBASIC0.15□□□□□ -2.39
UPF3BQ9BZI7 SCOCP1-201ENST00000554676 349 ntBASIC0.15□□□□□ -2.39
UPF3BQ9BZI7 MIR4438-201ENST00000585271 93 ntBASIC0.15□□□□□ -2.39
UPF3BQ9BZI7 RMST_3.1-201ENST00000611651 109 ntBASIC0.15□□□□□ -2.39
UPF3BQ9BZI7 AC122133.1-201ENST00000613964 233 ntBASIC0.15□□□□□ -2.39
UPF3BQ9BZI7 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC0.15□□□□□ -2.39
UPF3BQ9BZI7 AC068137.4-201ENST00000638485 296 ntBASIC0.15□□□□□ -2.39
UPF3BQ9BZI7 ZNF204P-201ENST00000416749 2397 ntBASIC0.14□□□□□ -2.39
UPF3BQ9BZI7 MIR103A2-201ENST00000362154 78 ntBASIC0.14□□□□□ -2.39
UPF3BQ9BZI7 RNU6-833P-201ENST00000363486 107 ntBASIC0.14□□□□□ -2.39
UPF3BQ9BZI7 MTCO3P19-201ENST00000415864 321 ntBASIC0.14□□□□□ -2.39
UPF3BQ9BZI7 MTND3P9-201ENST00000429526 346 ntBASIC0.14□□□□□ -2.39
UPF3BQ9BZI7 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC0.14□□□□□ -2.39
UPF3BQ9BZI7 AL009048.1-201ENST00000450437 298 ntBASIC0.14□□□□□ -2.39
UPF3BQ9BZI7 AC005178.1-201ENST00000508392 440 ntBASIC0.14□□□□□ -2.39
UPF3BQ9BZI7 RNU6-758P-201ENST00000516292 89 ntBASIC0.14□□□□□ -2.39
UPF3BQ9BZI7 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC0.14□□□□□ -2.39
UPF3BQ9BZI7 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC0.14□□□□□ -2.39
UPF3BQ9BZI7 AC245014.2-201ENST00000603689 287 ntBASIC0.14□□□□□ -2.39
UPF3BQ9BZI7 AL022161.1-201ENST00000604390 213 ntBASIC0.14□□□□□ -2.39
UPF3BQ9BZI7 AC246785.4-201ENST00000605374 287 ntBASIC0.14□□□□□ -2.39
UPF3BQ9BZI7 Y_RNA.336-201ENST00000365307 109 ntBASIC0.13□□□□□ -2.39
UPF3BQ9BZI7 RNU4-45P-201ENST00000365469 141 ntBASIC0.13□□□□□ -2.39
UPF3BQ9BZI7 RNU6-784P-201ENST00000384330 106 ntBASIC0.13□□□□□ -2.39
UPF3BQ9BZI7 MIR526A1-201ENST00000384897 85 ntBASIC0.13□□□□□ -2.39
UPF3BQ9BZI7 SNORD105-201ENST00000386910 85 ntBASIC0.13□□□□□ -2.39
UPF3BQ9BZI7 AL049545.1-201ENST00000401856 572 ntBASIC0.13□□□□□ -2.39
UPF3BQ9BZI7 MIR1827-201ENST00000408549 66 ntBASIC0.13□□□□□ -2.39
UPF3BQ9BZI7 MIR1185-1-201ENST00000408598 86 ntBASIC0.13□□□□□ -2.39
UPF3BQ9BZI7 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.13□□□□□ -2.39
UPF3BQ9BZI7 ZNF114P1-201ENST00000453500 292 ntBASIC0.13□□□□□ -2.39
UPF3BQ9BZI7 OFD1P4Y-201ENST00000455273 1179 ntBASIC0.13□□□□□ -2.39
UPF3BQ9BZI7 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC0.13□□□□□ -2.39
UPF3BQ9BZI7 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC0.13□□□□□ -2.39
UPF3BQ9BZI7 RNU2-56P-201ENST00000516826 190 ntBASIC0.13□□□□□ -2.39
UPF3BQ9BZI7 SCARNA1-201ENST00000517138 166 ntBASIC0.13□□□□□ -2.39
UPF3BQ9BZI7 AP002004.2-201ENST00000531656 154 ntBASIC0.13□□□□□ -2.39
UPF3BQ9BZI7 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC0.13□□□□□ -2.39
UPF3BQ9BZI7 Z84480.1-201ENST00000605131 311 ntBASIC0.13□□□□□ -2.39
UPF3BQ9BZI7 AC005592.1-201ENST00000566527 1640 ntBASIC0.13□□□□□ -2.39
UPF3BQ9BZI7 Y_RNA.100-201ENST00000363141 102 ntBASIC0.12□□□□□ -2.39
UPF3BQ9BZI7 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC0.12□□□□□ -2.39
UPF3BQ9BZI7 RNU6-195P-201ENST00000411352 109 ntBASIC0.12□□□□□ -2.39
UPF3BQ9BZI7 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC0.12□□□□□ -2.39
UPF3BQ9BZI7 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC0.12□□□□□ -2.39
UPF3BQ9BZI7 AL356010.1-201ENST00000456364 102 ntBASIC0.12□□□□□ -2.39
UPF3BQ9BZI7 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.12□□□□□ -2.39
UPF3BQ9BZI7 AC027288.2-201ENST00000553028 243 ntBASIC0.12□□□□□ -2.39
UPF3BQ9BZI7 RAC1P9-201ENST00000604990 392 ntBASIC0.12□□□□□ -2.39
UPF3BQ9BZI7 RNU6-94P-201ENST00000607728 107 ntBASIC0.12□□□□□ -2.39
UPF3BQ9BZI7 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC0.12□□□□□ -2.39
UPF3BQ9BZI7 AP001506.1-201ENST00000615444 211 ntBASIC0.12□□□□□ -2.39
UPF3BQ9BZI7 AC240442.1-201ENST00000616055 283 ntBASIC0.12□□□□□ -2.39
UPF3BQ9BZI7 AC009161.2-201ENST00000624626 138 ntBASIC0.12□□□□□ -2.39
UPF3BQ9BZI7 OR5AK4P-201ENST00000635912 903 ntBASIC0.12□□□□□ -2.39
UPF3BQ9BZI7 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.11□□□□□ -2.39
UPF3BQ9BZI7 Y_RNA.123-201ENST00000363338 102 ntBASIC0.11□□□□□ -2.39
UPF3BQ9BZI7 RNU6-137P-201ENST00000363680 108 ntBASIC0.11□□□□□ -2.39
UPF3BQ9BZI7 FGFR1OP2P1-201ENST00000395943 500 ntBASIC0.11□□□□□ -2.39
UPF3BQ9BZI7 SSR1P2-201ENST00000415208 787 ntBASIC0.11□□□□□ -2.39
UPF3BQ9BZI7 MTND2P9-201ENST00000422293 931 ntBASIC0.11□□□□□ -2.39
UPF3BQ9BZI7 SNORD65B-201ENST00000459126 73 ntBASIC0.11□□□□□ -2.39
UPF3BQ9BZI7 RPL23AP54-201ENST00000495129 419 ntBASIC0.11□□□□□ -2.39
UPF3BQ9BZI7 RNU6-311P-201ENST00000516224 102 ntBASIC0.11□□□□□ -2.39
UPF3BQ9BZI7 RNU6-58P-201ENST00000517143 103 ntBASIC0.11□□□□□ -2.39
UPF3BQ9BZI7 AF235103.2-201ENST00000525753 346 ntBASIC0.11□□□□□ -2.39
UPF3BQ9BZI7 AL358944.1-201ENST00000528537 144 ntBASIC0.11□□□□□ -2.39
UPF3BQ9BZI7 AC091178.2-201ENST00000584401 117 ntBASIC0.11□□□□□ -2.39
UPF3BQ9BZI7 AC100812.1-201ENST00000607622 580 ntBASIC0.11□□□□□ -2.39
UPF3BQ9BZI7 AC027279.3-201ENST00000625055 122 ntBASIC0.11□□□□□ -2.39
UPF3BQ9BZI7 SNORD114-15-201ENST00000364687 72 ntBASIC0.1□□□□□ -2.39
UPF3BQ9BZI7 MIR487A-201ENST00000385009 80 ntBASIC0.1□□□□□ -2.39
UPF3BQ9BZI7 RNU6-903P-201ENST00000391270 109 ntBASIC0.1□□□□□ -2.39
UPF3BQ9BZI7 CALM2P3-201ENST00000400429 449 ntBASIC0.1□□□□□ -2.39
UPF3BQ9BZI7 MIR891A-201ENST00000401237 79 ntBASIC0.1□□□□□ -2.39
UPF3BQ9BZI7 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.1□□□□□ -2.39
UPF3BQ9BZI7 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC0.1□□□□□ -2.39
UPF3BQ9BZI7 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC0.1□□□□□ -2.39
UPF3BQ9BZI7 MTCO3P38-201ENST00000468910 766 ntBASIC0.1□□□□□ -2.39
UPF3BQ9BZI7 AC010598.1-201ENST00000510378 103 ntBASIC0.1□□□□□ -2.39
UPF3BQ9BZI7 MTND1P35-201ENST00000526739 508 ntBASIC0.1□□□□□ -2.39
UPF3BQ9BZI7 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC0.1□□□□□ -2.39
UPF3BQ9BZI7 AK6P2-201ENST00000549020 471 ntBASIC0.1□□□□□ -2.39
UPF3BQ9BZI7 RPL21P9-201ENST00000556149 474 ntBASIC0.1□□□□□ -2.39
UPF3BQ9BZI7 MTND1P8-201ENST00000571424 950 ntBASIC0.1□□□□□ -2.39
UPF3BQ9BZI7 SNORD114-31-201ENST00000363219 75 ntBASIC0.09□□□□□ -2.4
UPF3BQ9BZI7 Y_RNA.142-201ENST00000363491 102 ntBASIC0.09□□□□□ -2.4
UPF3BQ9BZI7 RNU6-517P-201ENST00000384362 110 ntBASIC0.09□□□□□ -2.4
UPF3BQ9BZI7 MIR450B-201ENST00000401182 78 ntBASIC0.09□□□□□ -2.4
UPF3BQ9BZI7 MTCO2P8-201ENST00000412213 658 ntBASIC0.09□□□□□ -2.4
UPF3BQ9BZI7 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC0.09□□□□□ -2.4
UPF3BQ9BZI7 MTCO2P18-201ENST00000457151 658 ntBASIC0.09□□□□□ -2.4
UPF3BQ9BZI7 AC097462.1-201ENST00000514125 324 ntBASIC0.09□□□□□ -2.4
UPF3BQ9BZI7 SNORA14.1-201ENST00000516113 141 ntBASIC0.09□□□□□ -2.4
UPF3BQ9BZI7 AP002963.1-201ENST00000530590 184 ntBASIC0.09□□□□□ -2.4
UPF3BQ9BZI7 MIR8076-201ENST00000611401 83 ntBASIC0.09□□□□□ -2.4
UPF3BQ9BZI7 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.08□□□□□ -2.4
UPF3BQ9BZI7 SNORD87-201ENST00000364849 89 ntBASIC0.08□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms