Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
KRTAP4-3Q9BYR4 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
KRTAP4-3Q9BYR4 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC1.31□□□□□ -2.2
KRTAP4-3Q9BYR4 Y_RNA.42-201ENST00000362660 108 ntBASIC1.31□□□□□ -2.2
KRTAP4-3Q9BYR4 RNU6-1167P-201ENST00000363227 94 ntBASIC1.31□□□□□ -2.2
KRTAP4-3Q9BYR4 RNA5SP51-201ENST00000364750 119 ntBASIC1.31□□□□□ -2.2
KRTAP4-3Q9BYR4 SNORD115-26-201ENST00000365067 82 ntBASIC1.31□□□□□ -2.2
KRTAP4-3Q9BYR4 Y_RNA.470-201ENST00000384307 117 ntBASIC1.31□□□□□ -2.2
KRTAP4-3Q9BYR4 MIR206-201ENST00000384872 86 ntBASIC1.31□□□□□ -2.2
KRTAP4-3Q9BYR4 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
KRTAP4-3Q9BYR4 RNA5SP299-201ENST00000391203 116 ntBASIC1.31□□□□□ -2.2
KRTAP4-3Q9BYR4 SNORA11.2-201ENST00000408318 127 ntBASIC1.31□□□□□ -2.2
KRTAP4-3Q9BYR4 RNU6ATAC-201ENST00000408749 126 ntBASIC1.31□□□□□ -2.2
KRTAP4-3Q9BYR4 AL035423.1-201ENST00000420331 213 ntBASIC1.31□□□□□ -2.2
KRTAP4-3Q9BYR4 AC078809.1-201ENST00000427601 140 ntBASIC1.31□□□□□ -2.2
KRTAP4-3Q9BYR4 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC1.31□□□□□ -2.2
KRTAP4-3Q9BYR4 MTND4LP1-201ENST00000446263 157 ntBASIC1.31□□□□□ -2.2
KRTAP4-3Q9BYR4 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
KRTAP4-3Q9BYR4 SNORA31.4-201ENST00000516049 129 ntBASIC1.31□□□□□ -2.2
KRTAP4-3Q9BYR4 RNA5SP33-201ENST00000516687 98 ntBASIC1.31□□□□□ -2.2
KRTAP4-3Q9BYR4 RNU6-1258P-201ENST00000516911 111 ntBASIC1.31□□□□□ -2.2
KRTAP4-3Q9BYR4 RNA5SP94-201ENST00000516917 108 ntBASIC1.31□□□□□ -2.2
KRTAP4-3Q9BYR4 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC1.31□□□□□ -2.2
KRTAP4-3Q9BYR4 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC1.31□□□□□ -2.2
KRTAP4-3Q9BYR4 AL121603.1-201ENST00000553815 142 ntBASIC1.31□□□□□ -2.2
KRTAP4-3Q9BYR4 MIR3920-201ENST00000581751 86 ntBASIC1.31□□□□□ -2.2
KRTAP4-3Q9BYR4 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC1.31□□□□□ -2.2
KRTAP4-3Q9BYR4 AL162713.1-201ENST00000604480 262 ntBASIC1.31□□□□□ -2.2
KRTAP4-3Q9BYR4 AL137849.1-201ENST00000604767 169 ntBASIC1.31□□□□□ -2.2
KRTAP4-3Q9BYR4 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.31□□□□□ -2.2
KRTAP4-3Q9BYR4 AC009093.8-201ENST00000641769 292 ntBASIC1.31□□□□□ -2.2
KRTAP4-3Q9BYR4 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC1.31□□□□□ -2.2
KRTAP4-3Q9BYR4 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
KRTAP4-3Q9BYR4 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC1.31□□□□□ -2.2
KRTAP4-3Q9BYR4 AC139713.2-215ENST00000641428 5037 ntBASIC1.31□□□□□ -2.2
KRTAP4-3Q9BYR4 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC1.31□□□□□ -2.2
KRTAP4-3Q9BYR4 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC1.31□□□□□ -2.2
KRTAP4-3Q9BYR4 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
KRTAP4-3Q9BYR4 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
KRTAP4-3Q9BYR4 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
KRTAP4-3Q9BYR4 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC1.3□□□□□ -2.2
KRTAP4-3Q9BYR4 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC1.3□□□□□ -2.2
KRTAP4-3Q9BYR4 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
KRTAP4-3Q9BYR4 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
KRTAP4-3Q9BYR4 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
KRTAP4-3Q9BYR4 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
KRTAP4-3Q9BYR4 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC1.3□□□□□ -2.2
KRTAP4-3Q9BYR4 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
KRTAP4-3Q9BYR4 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
KRTAP4-3Q9BYR4 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC1.3□□□□□ -2.2
KRTAP4-3Q9BYR4 SNORA1B-201ENST00000362535 133 ntBASIC1.3□□□□□ -2.2
KRTAP4-3Q9BYR4 SNORD115-28-201ENST00000363931 81 ntBASIC1.3□□□□□ -2.2
KRTAP4-3Q9BYR4 RNU1-91P-201ENST00000364746 163 ntBASIC1.3□□□□□ -2.2
KRTAP4-3Q9BYR4 RNU4-7P-201ENST00000364758 141 ntBASIC1.3□□□□□ -2.2
KRTAP4-3Q9BYR4 RNA5-8SP4-201ENST00000365096 150 ntBASIC1.3□□□□□ -2.2
KRTAP4-3Q9BYR4 RNA5SP138-201ENST00000365098 114 ntBASIC1.3□□□□□ -2.2
KRTAP4-3Q9BYR4 RNU6-117P-201ENST00000365415 107 ntBASIC1.3□□□□□ -2.2
KRTAP4-3Q9BYR4 SNORA67.2-201ENST00000384300 149 ntBASIC1.3□□□□□ -2.2
KRTAP4-3Q9BYR4 RNU6-59P-201ENST00000384787 107 ntBASIC1.3□□□□□ -2.2
KRTAP4-3Q9BYR4 MIR181A2-201ENST00000384863 110 ntBASIC1.3□□□□□ -2.2
KRTAP4-3Q9BYR4 MIR548B-201ENST00000385247 97 ntBASIC1.3□□□□□ -2.2
KRTAP4-3Q9BYR4 MIR548U-201ENST00000390728 81 ntBASIC1.3□□□□□ -2.2
KRTAP4-3Q9BYR4 RNA5SP372-201ENST00000390836 115 ntBASIC1.3□□□□□ -2.2
KRTAP4-3Q9BYR4 MIR208B-201ENST00000401172 77 ntBASIC1.3□□□□□ -2.2
KRTAP4-3Q9BYR4 RNU4-62P-201ENST00000410125 130 ntBASIC1.3□□□□□ -2.2
KRTAP4-3Q9BYR4 RNA5SP306-201ENST00000411087 107 ntBASIC1.3□□□□□ -2.2
KRTAP4-3Q9BYR4 SNX2P2-201ENST00000424553 323 ntBASIC1.3□□□□□ -2.2
KRTAP4-3Q9BYR4 BX276092.1-201ENST00000427368 251 ntBASIC1.3□□□□□ -2.2
KRTAP4-3Q9BYR4 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC1.3□□□□□ -2.2
KRTAP4-3Q9BYR4 SNRPGP14-201ENST00000435400 219 ntBASIC1.3□□□□□ -2.2
KRTAP4-3Q9BYR4 AC090774.1-201ENST00000435925 246 ntBASIC1.3□□□□□ -2.2
KRTAP4-3Q9BYR4 AC069285.2-201ENST00000440210 275 ntBASIC1.3□□□□□ -2.2
KRTAP4-3Q9BYR4 AC025750.2-201ENST00000442609 450 ntBASIC1.3□□□□□ -2.2
KRTAP4-3Q9BYR4 RPL23AP6-201ENST00000446637 472 ntBASIC1.3□□□□□ -2.2
KRTAP4-3Q9BYR4 AL451050.1-201ENST00000450126 415 ntBASIC1.3□□□□□ -2.2
KRTAP4-3Q9BYR4 HSPE1P24-201ENST00000450782 238 ntBASIC1.3□□□□□ -2.2
KRTAP4-3Q9BYR4 RPS29P12-201ENST00000460178 152 ntBASIC1.3□□□□□ -2.2
KRTAP4-3Q9BYR4 SNORA31.16-201ENST00000516773 139 ntBASIC1.3□□□□□ -2.2
KRTAP4-3Q9BYR4 RNU6-1231P-201ENST00000517185 103 ntBASIC1.3□□□□□ -2.2
KRTAP4-3Q9BYR4 AP004607.1-201ENST00000524456 203 ntBASIC1.3□□□□□ -2.2
KRTAP4-3Q9BYR4 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC1.3□□□□□ -2.2
KRTAP4-3Q9BYR4 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
KRTAP4-3Q9BYR4 CYP4A43P-201ENST00000568156 121 ntBASIC1.3□□□□□ -2.2
KRTAP4-3Q9BYR4 MIR4504-201ENST00000577413 92 ntBASIC1.3□□□□□ -2.2
KRTAP4-3Q9BYR4 MIR3200-201ENST00000580767 85 ntBASIC1.3□□□□□ -2.2
KRTAP4-3Q9BYR4 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC1.3□□□□□ -2.2
KRTAP4-3Q9BYR4 AL161756.2-201ENST00000604597 246 ntBASIC1.3□□□□□ -2.2
KRTAP4-3Q9BYR4 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.3□□□□□ -2.2
KRTAP4-3Q9BYR4 AL359075.3-201ENST00000613288 217 ntBASIC1.3□□□□□ -2.2
KRTAP4-3Q9BYR4 AL591424.2-201ENST00000617023 128 ntBASIC1.3□□□□□ -2.2
KRTAP4-3Q9BYR4 MIR8066-201ENST00000617280 78 ntBASIC1.3□□□□□ -2.2
KRTAP4-3Q9BYR4 AC012314.7-201ENST00000619693 93 ntBASIC1.3□□□□□ -2.2
KRTAP4-3Q9BYR4 MIR7154-201ENST00000620673 73 ntBASIC1.3□□□□□ -2.2
KRTAP4-3Q9BYR4 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC1.3□□□□□ -2.2
KRTAP4-3Q9BYR4 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.3□□□□□ -2.2
KRTAP4-3Q9BYR4 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
KRTAP4-3Q9BYR4 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
KRTAP4-3Q9BYR4 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC1.3□□□□□ -2.2
KRTAP4-3Q9BYR4 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC1.3□□□□□ -2.2
KRTAP4-3Q9BYR4 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms