Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 BX510359.4-201ENST00000423750 193 ntBASIC2.57□□□□□ -2
RTFDC1Q9BY42 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.57□□□□□ -2
RTFDC1Q9BY42 AC073910.1-201ENST00000445047 438 ntBASIC2.57□□□□□ -2
RTFDC1Q9BY42 AC011406.1-201ENST00000512440 370 ntBASIC2.57□□□□□ -2
RTFDC1Q9BY42 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.57□□□□□ -2
RTFDC1Q9BY42 RNU6-1143P-201ENST00000516125 104 ntBASIC2.57□□□□□ -2
RTFDC1Q9BY42 RNU6-764P-201ENST00000516396 105 ntBASIC2.57□□□□□ -2
RTFDC1Q9BY42 RNU2-19P-201ENST00000517288 84 ntBASIC2.57□□□□□ -2
RTFDC1Q9BY42 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.57□□□□□ -2
RTFDC1Q9BY42 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.57□□□□□ -2
RTFDC1Q9BY42 AL021879.1-201ENST00000611756 288 ntBASIC2.57□□□□□ -2
RTFDC1Q9BY42 RNU1-17P-201ENST00000363022 152 ntBASIC2.56□□□□□ -2
RTFDC1Q9BY42 RNU6-626P-201ENST00000363354 107 ntBASIC2.56□□□□□ -2
RTFDC1Q9BY42 SNORD114-6-201ENST00000364393 72 ntBASIC2.56□□□□□ -2
RTFDC1Q9BY42 RNU6-20P-201ENST00000384106 107 ntBASIC2.56□□□□□ -2
RTFDC1Q9BY42 SNORD63-201ENST00000384262 68 ntBASIC2.56□□□□□ -2
RTFDC1Q9BY42 RNU6-1160P-201ENST00000384546 104 ntBASIC2.56□□□□□ -2
RTFDC1Q9BY42 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.56□□□□□ -2
RTFDC1Q9BY42 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.56□□□□□ -2
RTFDC1Q9BY42 RNA5SP182-201ENST00000516064 82 ntBASIC2.56□□□□□ -2
RTFDC1Q9BY42 SNORA40.15-201ENST00000516884 107 ntBASIC2.56□□□□□ -2
RTFDC1Q9BY42 AC011476.5-201ENST00000615594 130 ntBASIC2.56□□□□□ -2
RTFDC1Q9BY42 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.56□□□□□ -2
RTFDC1Q9BY42 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.55□□□□□ -2
RTFDC1Q9BY42 snoU2-30.2-201ENST00000362805 70 ntBASIC2.55□□□□□ -2
RTFDC1Q9BY42 Y_RNA.183-201ENST00000363882 113 ntBASIC2.55□□□□□ -2
RTFDC1Q9BY42 RPL23AP36-201ENST00000413895 458 ntBASIC2.55□□□□□ -2
RTFDC1Q9BY42 AC005002.2-201ENST00000438228 269 ntBASIC2.55□□□□□ -2
RTFDC1Q9BY42 AC010598.1-201ENST00000510378 103 ntBASIC2.55□□□□□ -2
RTFDC1Q9BY42 HMGB3P3-201ENST00000510526 400 ntBASIC2.55□□□□□ -2
RTFDC1Q9BY42 Y_RNA.673-201ENST00000516306 88 ntBASIC2.55□□□□□ -2
RTFDC1Q9BY42 AP005660.1-201ENST00000522972 293 ntBASIC2.55□□□□□ -2
RTFDC1Q9BY42 AC121758.2-201ENST00000553271 193 ntBASIC2.55□□□□□ -2
RTFDC1Q9BY42 AL137100.2-201ENST00000555786 315 ntBASIC2.55□□□□□ -2
RTFDC1Q9BY42 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.55□□□□□ -2
RTFDC1Q9BY42 AC113195.1-201ENST00000579952 141 ntBASIC2.55□□□□□ -2
RTFDC1Q9BY42 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.55□□□□□ -2
RTFDC1Q9BY42 AC012640.5-201ENST00000623897 319 ntBASIC2.55□□□□□ -2
RTFDC1Q9BY42 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.55□□□□□ -2
RTFDC1Q9BY42 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.54□□□□□ -2
RTFDC1Q9BY42 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.54□□□□□ -2
RTFDC1Q9BY42 SNORD114-7-201ENST00000362520 77 ntBASIC2.54□□□□□ -2
RTFDC1Q9BY42 RNU6-961P-201ENST00000363893 105 ntBASIC2.54□□□□□ -2
RTFDC1Q9BY42 RNU6-450P-201ENST00000364654 107 ntBASIC2.54□□□□□ -2
RTFDC1Q9BY42 Y_RNA.527-201ENST00000384573 102 ntBASIC2.54□□□□□ -2
RTFDC1Q9BY42 MIR1283-2-201ENST00000408621 87 ntBASIC2.54□□□□□ -2
RTFDC1Q9BY42 AL139156.1-201ENST00000412785 841 ntBASIC2.54□□□□□ -2
RTFDC1Q9BY42 AC060773.1-201ENST00000421698 310 ntBASIC2.54□□□□□ -2
RTFDC1Q9BY42 CST2P1-201ENST00000425770 87 ntBASIC2.54□□□□□ -2
RTFDC1Q9BY42 SNORA70.12-201ENST00000516084 153 ntBASIC2.54□□□□□ -2
RTFDC1Q9BY42 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.54□□□□□ -2
RTFDC1Q9BY42 AC008749.1-201ENST00000597650 306 ntBASIC2.54□□□□□ -2
RTFDC1Q9BY42 AC004467.1-201ENST00000615678 330 ntBASIC2.54□□□□□ -2
RTFDC1Q9BY42 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.54□□□□□ -2
RTFDC1Q9BY42 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
RTFDC1Q9BY42 Y_RNA.145-201ENST00000363527 102 ntBASIC2.53□□□□□ -2
RTFDC1Q9BY42 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.53□□□□□ -2
RTFDC1Q9BY42 HMGN2P34-201ENST00000437647 269 ntBASIC2.53□□□□□ -2
RTFDC1Q9BY42 AC069257.2-201ENST00000441819 155 ntBASIC2.53□□□□□ -2
RTFDC1Q9BY42 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.53□□□□□ -2
RTFDC1Q9BY42 AC055731.1-201ENST00000474387 401 ntBASIC2.53□□□□□ -2
RTFDC1Q9BY42 MIR4423-201ENST00000580922 80 ntBASIC2.53□□□□□ -2
RTFDC1Q9BY42 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.53□□□□□ -2
RTFDC1Q9BY42 AC007742.2-201ENST00000618226 398 ntBASIC2.53□□□□□ -2
RTFDC1Q9BY42 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
RTFDC1Q9BY42 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
RTFDC1Q9BY42 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2.01
RTFDC1Q9BY42 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
RTFDC1Q9BY42 AC245060.5-201ENST00000610778 3293 ntBASIC2.52□□□□□ -2.01
RTFDC1Q9BY42 Y_RNA.4-201ENST00000362333 112 ntBASIC2.52□□□□□ -2.01
RTFDC1Q9BY42 SNORA6-201ENST00000384033 151 ntBASIC2.52□□□□□ -2.01
RTFDC1Q9BY42 Y_RNA.570-201ENST00000384750 101 ntBASIC2.52□□□□□ -2.01
RTFDC1Q9BY42 MIR606-201ENST00000384851 96 ntBASIC2.52□□□□□ -2.01
RTFDC1Q9BY42 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.52□□□□□ -2.01
RTFDC1Q9BY42 RNU2-54P-201ENST00000410299 190 ntBASIC2.52□□□□□ -2.01
RTFDC1Q9BY42 RNA5SP247-201ENST00000411181 105 ntBASIC2.52□□□□□ -2.01
RTFDC1Q9BY42 AC005042.3-201ENST00000453230 174 ntBASIC2.52□□□□□ -2.01
RTFDC1Q9BY42 RNU6-1041P-201ENST00000516254 102 ntBASIC2.52□□□□□ -2.01
RTFDC1Q9BY42 AC069114.2-201ENST00000604699 304 ntBASIC2.52□□□□□ -2.01
RTFDC1Q9BY42 AC011373.1-201ENST00000607270 237 ntBASIC2.52□□□□□ -2.01
RTFDC1Q9BY42 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.52□□□□□ -2.01
RTFDC1Q9BY42 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.52□□□□□ -2.01
RTFDC1Q9BY42 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
RTFDC1Q9BY42 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
RTFDC1Q9BY42 CENPCP1-201ENST00000533085 2578 ntBASIC2.51□□□□□ -2.01
RTFDC1Q9BY42 Y_RNA.338-201ENST00000365320 114 ntBASIC2.51□□□□□ -2.01
RTFDC1Q9BY42 RNU6-21P-201ENST00000384710 107 ntBASIC2.51□□□□□ -2.01
RTFDC1Q9BY42 MIR583-201ENST00000384846 75 ntBASIC2.51□□□□□ -2.01
RTFDC1Q9BY42 MIR597-201ENST00000384968 97 ntBASIC2.51□□□□□ -2.01
RTFDC1Q9BY42 SNORA48.1-201ENST00000390879 135 ntBASIC2.51□□□□□ -2.01
RTFDC1Q9BY42 RNA5SP450-201ENST00000411206 102 ntBASIC2.51□□□□□ -2.01
RTFDC1Q9BY42 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.51□□□□□ -2.01
RTFDC1Q9BY42 IPO7P1-201ENST00000442031 636 ntBASIC2.51□□□□□ -2.01
RTFDC1Q9BY42 Y_RNA.720-201ENST00000517166 92 ntBASIC2.51□□□□□ -2.01
RTFDC1Q9BY42 AC131281.1-201ENST00000522984 164 ntBASIC2.51□□□□□ -2.01
RTFDC1Q9BY42 AC024995.1-201ENST00000523014 93 ntBASIC2.51□□□□□ -2.01
RTFDC1Q9BY42 MIR4498-201ENST00000577599 66 ntBASIC2.51□□□□□ -2.01
RTFDC1Q9BY42 AC022441.3-201ENST00000605737 136 ntBASIC2.51□□□□□ -2.01
RTFDC1Q9BY42 AL137847.3-201ENST00000611521 109 ntBASIC2.51□□□□□ -2.01
RTFDC1Q9BY42 AC091932.3-201ENST00000624223 323 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms