Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 EBAG9P1-201ENST00000418955 543 ntBASIC3.43□□□□□ -1.86
TRAIPQ9BWF2 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC3.43□□□□□ -1.86
TRAIPQ9BWF2 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.43□□□□□ -1.86
TRAIPQ9BWF2 CST9LP2-201ENST00000437612 320 ntBASIC3.43□□□□□ -1.86
TRAIPQ9BWF2 RNU1-143P-201ENST00000516296 146 ntBASIC3.43□□□□□ -1.86
TRAIPQ9BWF2 RNU6-63P-201ENST00000516690 95 ntBASIC3.43□□□□□ -1.86
TRAIPQ9BWF2 MIR4529-201ENST00000578110 78 ntBASIC3.43□□□□□ -1.86
TRAIPQ9BWF2 UBL5P2-201ENST00000583788 219 ntBASIC3.43□□□□□ -1.86
TRAIPQ9BWF2 U1.23-201ENST00000610293 146 ntBASIC3.43□□□□□ -1.86
TRAIPQ9BWF2 RNU1-68P-201ENST00000615382 146 ntBASIC3.43□□□□□ -1.86
TRAIPQ9BWF2 U1.39-201ENST00000621562 146 ntBASIC3.43□□□□□ -1.86
TRAIPQ9BWF2 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
TRAIPQ9BWF2 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
TRAIPQ9BWF2 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
TRAIPQ9BWF2 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
TRAIPQ9BWF2 MIR148B-201ENST00000362252 99 ntBASIC3.42□□□□□ -1.86
TRAIPQ9BWF2 RNU6-211P-201ENST00000384047 107 ntBASIC3.42□□□□□ -1.86
TRAIPQ9BWF2 SNORA54-201ENST00000384281 123 ntBASIC3.42□□□□□ -1.86
TRAIPQ9BWF2 RNU6-136P-201ENST00000384663 107 ntBASIC3.42□□□□□ -1.86
TRAIPQ9BWF2 RNA5SP467-201ENST00000391274 118 ntBASIC3.42□□□□□ -1.86
TRAIPQ9BWF2 RNA5SP217-201ENST00000515959 91 ntBASIC3.42□□□□□ -1.86
TRAIPQ9BWF2 RNU6-801P-201ENST00000364087 105 ntBASIC3.41□□□□□ -1.86
TRAIPQ9BWF2 Y_RNA.292-201ENST00000364904 97 ntBASIC3.41□□□□□ -1.86
TRAIPQ9BWF2 SNORD15B-201ENST00000384714 146 ntBASIC3.41□□□□□ -1.86
TRAIPQ9BWF2 SNORD58.1-201ENST00000391313 66 ntBASIC3.41□□□□□ -1.86
TRAIPQ9BWF2 RPL32P35-201ENST00000415214 394 ntBASIC3.41□□□□□ -1.86
TRAIPQ9BWF2 AC107083.1-201ENST00000439643 279 ntBASIC3.41□□□□□ -1.86
TRAIPQ9BWF2 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC3.41□□□□□ -1.86
TRAIPQ9BWF2 RNU7-94P-201ENST00000459576 63 ntBASIC3.41□□□□□ -1.86
TRAIPQ9BWF2 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.41□□□□□ -1.86
TRAIPQ9BWF2 MIR4643-201ENST00000577473 78 ntBASIC3.41□□□□□ -1.86
TRAIPQ9BWF2 AC073413.2-201ENST00000604332 360 ntBASIC3.41□□□□□ -1.86
TRAIPQ9BWF2 AC069114.2-201ENST00000604699 304 ntBASIC3.41□□□□□ -1.86
TRAIPQ9BWF2 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
TRAIPQ9BWF2 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.41□□□□□ -1.86
TRAIPQ9BWF2 AC134026.1-201ENST00000623249 2239 ntBASIC3.4□□□□□ -1.86
TRAIPQ9BWF2 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.4□□□□□ -1.86
TRAIPQ9BWF2 Y_RNA.200-201ENST00000364018 102 ntBASIC3.4□□□□□ -1.87
TRAIPQ9BWF2 MIR562-201ENST00000384894 95 ntBASIC3.4□□□□□ -1.87
TRAIPQ9BWF2 MIR597-201ENST00000384968 97 ntBASIC3.4□□□□□ -1.87
TRAIPQ9BWF2 RNU1-104P-201ENST00000517280 175 ntBASIC3.4□□□□□ -1.87
TRAIPQ9BWF2 AC245166.1-201ENST00000521012 253 ntBASIC3.4□□□□□ -1.87
TRAIPQ9BWF2 MIR4282-201ENST00000583613 67 ntBASIC3.4□□□□□ -1.87
TRAIPQ9BWF2 AC004832.4-201ENST00000608952 331 ntBASIC3.4□□□□□ -1.87
TRAIPQ9BWF2 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC3.4□□□□□ -1.87
TRAIPQ9BWF2 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
TRAIPQ9BWF2 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
TRAIPQ9BWF2 RNU6-1205P-201ENST00000363625 106 ntBASIC3.39□□□□□ -1.87
TRAIPQ9BWF2 SNORA80A-201ENST00000363922 136 ntBASIC3.39□□□□□ -1.87
TRAIPQ9BWF2 SNORA3A-201ENST00000364113 130 ntBASIC3.39□□□□□ -1.87
TRAIPQ9BWF2 Y_RNA.293-201ENST00000364908 93 ntBASIC3.39□□□□□ -1.87
TRAIPQ9BWF2 RNU1-51P-201ENST00000365345 176 ntBASIC3.39□□□□□ -1.87
TRAIPQ9BWF2 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC3.39□□□□□ -1.87
TRAIPQ9BWF2 SNORD116-13-201ENST00000384408 92 ntBASIC3.39□□□□□ -1.87
TRAIPQ9BWF2 MIR520G-201ENST00000385064 90 ntBASIC3.39□□□□□ -1.87
TRAIPQ9BWF2 RNA5SP511-201ENST00000410487 115 ntBASIC3.39□□□□□ -1.87
TRAIPQ9BWF2 AL135786.1-201ENST00000415892 214 ntBASIC3.39□□□□□ -1.87
TRAIPQ9BWF2 HMGN2P3-201ENST00000433603 273 ntBASIC3.39□□□□□ -1.87
TRAIPQ9BWF2 AL162725.1-201ENST00000435405 301 ntBASIC3.39□□□□□ -1.87
TRAIPQ9BWF2 HMGN2P5-201ENST00000436882 273 ntBASIC3.39□□□□□ -1.87
TRAIPQ9BWF2 SNORA59A-201ENST00000459326 152 ntBASIC3.39□□□□□ -1.87
TRAIPQ9BWF2 POLR3GP1-201ENST00000594073 261 ntBASIC3.39□□□□□ -1.87
TRAIPQ9BWF2 AC013791.1-201ENST00000616619 62 ntBASIC3.39□□□□□ -1.87
TRAIPQ9BWF2 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.39□□□□□ -1.87
TRAIPQ9BWF2 U1.36-201ENST00000620684 176 ntBASIC3.39□□□□□ -1.87
TRAIPQ9BWF2 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
TRAIPQ9BWF2 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
TRAIPQ9BWF2 MAPK10-266ENST00000641066 6555 ntBASIC3.39□□□□□ -1.87
TRAIPQ9BWF2 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
TRAIPQ9BWF2 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
TRAIPQ9BWF2 Y_RNA.199-201ENST00000364014 102 ntBASIC3.38□□□□□ -1.87
TRAIPQ9BWF2 RNU6-1323P-201ENST00000384025 107 ntBASIC3.38□□□□□ -1.87
TRAIPQ9BWF2 SNORA26.5-201ENST00000391215 123 ntBASIC3.38□□□□□ -1.87
TRAIPQ9BWF2 MIR1298-201ENST00000408783 112 ntBASIC3.38□□□□□ -1.87
TRAIPQ9BWF2 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.38□□□□□ -1.87
TRAIPQ9BWF2 AC069257.2-201ENST00000441819 155 ntBASIC3.38□□□□□ -1.87
TRAIPQ9BWF2 Y_RNA.637-201ENST00000459424 114 ntBASIC3.38□□□□□ -1.87
TRAIPQ9BWF2 COX6CP14-201ENST00000469580 174 ntBASIC3.38□□□□□ -1.87
TRAIPQ9BWF2 MIR5692C2-201ENST00000577959 77 ntBASIC3.38□□□□□ -1.87
TRAIPQ9BWF2 AC009779.6-201ENST00000603972 165 ntBASIC3.38□□□□□ -1.87
TRAIPQ9BWF2 MIR548AY-201ENST00000617669 107 ntBASIC3.38□□□□□ -1.87
TRAIPQ9BWF2 SCARNA15.3-201ENST00000626315 122 ntBASIC3.38□□□□□ -1.87
TRAIPQ9BWF2 SCARNA4.1-201ENST00000628597 123 ntBASIC3.38□□□□□ -1.87
TRAIPQ9BWF2 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.38□□□□□ -1.87
TRAIPQ9BWF2 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
TRAIPQ9BWF2 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.37□□□□□ -1.87
TRAIPQ9BWF2 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.37□□□□□ -1.87
TRAIPQ9BWF2 Y_RNA.76-201ENST00000362931 109 ntBASIC3.37□□□□□ -1.87
TRAIPQ9BWF2 Y_RNA.83-201ENST00000363005 113 ntBASIC3.37□□□□□ -1.87
TRAIPQ9BWF2 Y_RNA.172-201ENST00000363765 102 ntBASIC3.37□□□□□ -1.87
TRAIPQ9BWF2 RNY1-201ENST00000364228 113 ntBASIC3.37□□□□□ -1.87
TRAIPQ9BWF2 SNORA71.1-201ENST00000364523 117 ntBASIC3.37□□□□□ -1.87
TRAIPQ9BWF2 Y_RNA.262-201ENST00000364641 102 ntBASIC3.37□□□□□ -1.87
TRAIPQ9BWF2 Y_RNA.510-201ENST00000384511 114 ntBASIC3.37□□□□□ -1.87
TRAIPQ9BWF2 AL117342.1-201ENST00000404861 406 ntBASIC3.37□□□□□ -1.87
TRAIPQ9BWF2 HMGN2P35-201ENST00000412164 270 ntBASIC3.37□□□□□ -1.87
TRAIPQ9BWF2 COTL1P1-201ENST00000422309 375 ntBASIC3.37□□□□□ -1.87
TRAIPQ9BWF2 AC104332.1-201ENST00000440471 797 ntBASIC3.37□□□□□ -1.87
TRAIPQ9BWF2 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC3.37□□□□□ -1.87
TRAIPQ9BWF2 SNORD2.1-201ENST00000458762 69 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms