Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
VRK1Q99986 CENPCP1-201ENST00000533085 2578 ntBASIC2.49□□□□□ -2.01
VRK1Q99986 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
VRK1Q99986 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
VRK1Q99986 AC073325.2-201ENST00000339545 159 ntBASIC2.48□□□□□ -2.01
VRK1Q99986 RNU6-1164P-201ENST00000364428 107 ntBASIC2.48□□□□□ -2.01
VRK1Q99986 Y_RNA.368-201ENST00000365547 113 ntBASIC2.48□□□□□ -2.01
VRK1Q99986 RNU6-338P-201ENST00000383888 105 ntBASIC2.48□□□□□ -2.01
VRK1Q99986 Y_RNA.456-201ENST00000384232 111 ntBASIC2.48□□□□□ -2.01
VRK1Q99986 Y_RNA.510-201ENST00000384511 114 ntBASIC2.48□□□□□ -2.01
VRK1Q99986 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.48□□□□□ -2.01
VRK1Q99986 AC010154.1-201ENST00000425857 269 ntBASIC2.48□□□□□ -2.01
VRK1Q99986 AL139132.1-201ENST00000431587 344 ntBASIC2.48□□□□□ -2.01
VRK1Q99986 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.48□□□□□ -2.01
VRK1Q99986 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.48□□□□□ -2.01
VRK1Q99986 RPS26P55-201ENST00000471178 356 ntBASIC2.48□□□□□ -2.01
VRK1Q99986 UBE2DNL-203ENST00000474922 222 ntBASIC2.48□□□□□ -2.01
VRK1Q99986 RN7SL636P-201ENST00000497504 294 ntBASIC2.48□□□□□ -2.01
VRK1Q99986 AC011406.1-201ENST00000512440 370 ntBASIC2.48□□□□□ -2.01
VRK1Q99986 RNU4-71P-201ENST00000516258 113 ntBASIC2.48□□□□□ -2.01
VRK1Q99986 AC136628.3-201ENST00000521868 290 ntBASIC2.48□□□□□ -2.01
VRK1Q99986 AC009127.3-201ENST00000570531 403 ntBASIC2.48□□□□□ -2.01
VRK1Q99986 MIR4282-201ENST00000583613 67 ntBASIC2.48□□□□□ -2.01
VRK1Q99986 AL033523.1-201ENST00000605153 153 ntBASIC2.48□□□□□ -2.01
VRK1Q99986 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.47□□□□□ -2.01
VRK1Q99986 RNU1-91P-201ENST00000364746 163 ntBASIC2.47□□□□□ -2.01
VRK1Q99986 MIR181A2-201ENST00000384863 110 ntBASIC2.47□□□□□ -2.01
VRK1Q99986 SNORA11.2-201ENST00000408318 127 ntBASIC2.47□□□□□ -2.01
VRK1Q99986 AC087499.2-201ENST00000432861 149 ntBASIC2.47□□□□□ -2.01
VRK1Q99986 AL135938.1-201ENST00000443141 297 ntBASIC2.47□□□□□ -2.01
VRK1Q99986 RNA5SP20-201ENST00000515976 84 ntBASIC2.47□□□□□ -2.01
VRK1Q99986 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.47□□□□□ -2.01
VRK1Q99986 MIR3670-2-201ENST00000582974 65 ntBASIC2.47□□□□□ -2.01
VRK1Q99986 MIR3670-1-201ENST00000584160 65 ntBASIC2.47□□□□□ -2.01
VRK1Q99986 MIR3670-3-201ENST00000584855 65 ntBASIC2.47□□□□□ -2.01
VRK1Q99986 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.47□□□□□ -2.01
VRK1Q99986 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.47□□□□□ -2.01
VRK1Q99986 MIR3670-4-201ENST00000612260 65 ntBASIC2.47□□□□□ -2.01
VRK1Q99986 AL078604.3-201ENST00000615580 211 ntBASIC2.47□□□□□ -2.01
VRK1Q99986 AC078938.1-201ENST00000620993 318 ntBASIC2.47□□□□□ -2.01
VRK1Q99986 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
VRK1Q99986 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
VRK1Q99986 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.46□□□□□ -2.01
VRK1Q99986 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.46□□□□□ -2.02
VRK1Q99986 RNU1-35P-201ENST00000362782 153 ntBASIC2.46□□□□□ -2.02
VRK1Q99986 Y_RNA.122-201ENST00000363331 96 ntBASIC2.46□□□□□ -2.02
VRK1Q99986 Y_RNA.124-201ENST00000363339 93 ntBASIC2.46□□□□□ -2.02
VRK1Q99986 RNU6-1289P-201ENST00000384431 106 ntBASIC2.46□□□□□ -2.02
VRK1Q99986 SNORA40.19-201ENST00000390846 128 ntBASIC2.46□□□□□ -2.02
VRK1Q99986 MIR1253-201ENST00000408273 105 ntBASIC2.46□□□□□ -2.02
VRK1Q99986 SNORD2.1-201ENST00000458762 69 ntBASIC2.46□□□□□ -2.02
VRK1Q99986 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.46□□□□□ -2.02
VRK1Q99986 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.46□□□□□ -2.02
VRK1Q99986 AL137100.2-201ENST00000555786 315 ntBASIC2.46□□□□□ -2.02
VRK1Q99986 AC090425.1-201ENST00000610007 140 ntBASIC2.46□□□□□ -2.02
VRK1Q99986 AC022202.1-201ENST00000613515 211 ntBASIC2.46□□□□□ -2.02
VRK1Q99986 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.45□□□□□ -2.02
VRK1Q99986 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
VRK1Q99986 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
VRK1Q99986 snoU2-30.2-201ENST00000362805 70 ntBASIC2.45□□□□□ -2.02
VRK1Q99986 Y_RNA.65-201ENST00000362846 100 ntBASIC2.45□□□□□ -2.02
VRK1Q99986 RNA5SP493-201ENST00000364115 91 ntBASIC2.45□□□□□ -2.02
VRK1Q99986 Y_RNA.310-201ENST00000365063 113 ntBASIC2.45□□□□□ -2.02
VRK1Q99986 RNU6-662P-201ENST00000384253 104 ntBASIC2.45□□□□□ -2.02
VRK1Q99986 Y_RNA.515-201ENST00000384535 112 ntBASIC2.45□□□□□ -2.02
VRK1Q99986 MIR512-1-201ENST00000384913 84 ntBASIC2.45□□□□□ -2.02
VRK1Q99986 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.45□□□□□ -2.02
VRK1Q99986 AC105272.1-201ENST00000438604 198 ntBASIC2.45□□□□□ -2.02
VRK1Q99986 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.45□□□□□ -2.02
VRK1Q99986 AL139109.1-201ENST00000455491 297 ntBASIC2.45□□□□□ -2.02
VRK1Q99986 RPL36AP21-201ENST00000490372 323 ntBASIC2.45□□□□□ -2.02
VRK1Q99986 MIR3169-201ENST00000578032 83 ntBASIC2.45□□□□□ -2.02
VRK1Q99986 MIR3605-201ENST00000583214 100 ntBASIC2.45□□□□□ -2.02
VRK1Q99986 AL031274.2-201ENST00000599419 203 ntBASIC2.45□□□□□ -2.02
VRK1Q99986 AC009779.6-201ENST00000603972 165 ntBASIC2.45□□□□□ -2.02
VRK1Q99986 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.45□□□□□ -2.02
VRK1Q99986 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.45□□□□□ -2.02
VRK1Q99986 RNU6-1272P-201ENST00000362776 107 ntBASIC2.44□□□□□ -2.02
VRK1Q99986 Y_RNA.117-201ENST00000363294 101 ntBASIC2.44□□□□□ -2.02
VRK1Q99986 RNU6-801P-201ENST00000364087 105 ntBASIC2.44□□□□□ -2.02
VRK1Q99986 Y_RNA.269-201ENST00000364685 89 ntBASIC2.44□□□□□ -2.02
VRK1Q99986 RNU6-407P-201ENST00000365280 104 ntBASIC2.44□□□□□ -2.02
VRK1Q99986 Y_RNA.341-201ENST00000365341 102 ntBASIC2.44□□□□□ -2.02
VRK1Q99986 Y_RNA.590-201ENST00000410140 107 ntBASIC2.44□□□□□ -2.02
VRK1Q99986 RNU6-855P-201ENST00000410395 104 ntBASIC2.44□□□□□ -2.02
VRK1Q99986 HMGN2P34-201ENST00000437647 269 ntBASIC2.44□□□□□ -2.02
VRK1Q99986 AL135790.2-201ENST00000437701 267 ntBASIC2.44□□□□□ -2.02
VRK1Q99986 ATP5J2P3-201ENST00000451550 258 ntBASIC2.44□□□□□ -2.02
VRK1Q99986 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.44□□□□□ -2.02
VRK1Q99986 RNA5SP356-201ENST00000515972 94 ntBASIC2.44□□□□□ -2.02
VRK1Q99986 RNU6-1337P-201ENST00000516525 95 ntBASIC2.44□□□□□ -2.02
VRK1Q99986 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.44□□□□□ -2.02
VRK1Q99986 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.44□□□□□ -2.02
VRK1Q99986 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.44□□□□□ -2.02
VRK1Q99986 U6.73-201ENST00000619194 103 ntBASIC2.44□□□□□ -2.02
VRK1Q99986 MIR338-201ENST00000636369 67 ntBASIC2.44□□□□□ -2.02
VRK1Q99986 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.43□□□□□ -2.02
VRK1Q99986 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.43□□□□□ -2.02
VRK1Q99986 RNU1-58P-201ENST00000362413 163 ntBASIC2.43□□□□□ -2.02
VRK1Q99986 Y_RNA.76-201ENST00000362931 109 ntBASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms