Protein–RNA interactions for Protein: Q96RL7

VPS13A, Vacuolar protein sorting-associated protein 13A, humanhuman

Predictions only

Length 3,174 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13AQ96RL7 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC-2.05□□□□□ -2.74
VPS13AQ96RL7 Y_RNA.39-201ENST00000362620 98 ntBASIC-2.06□□□□□ -2.74
VPS13AQ96RL7 SNORA67.2-201ENST00000384300 149 ntBASIC-2.06□□□□□ -2.74
VPS13AQ96RL7 MIR2115-201ENST00000516657 100 ntBASIC-2.06□□□□□ -2.74
VPS13AQ96RL7 RNU6-850P-201ENST00000516934 103 ntBASIC-2.06□□□□□ -2.74
VPS13AQ96RL7 RNU5E-10P-201ENST00000363506 118 ntBASIC-2.06□□□□□ -2.74
VPS13AQ96RL7 Y_RNA.481-201ENST00000384373 102 ntBASIC-2.06□□□□□ -2.74
VPS13AQ96RL7 CDK8P2-201ENST00000415020 547 ntBASIC-2.06□□□□□ -2.74
VPS13AQ96RL7 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC-2.06□□□□□ -2.74
VPS13AQ96RL7 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC-2.06□□□□□ -2.74
VPS13AQ96RL7 AC137800.2-201ENST00000574375 120 ntBASIC-2.06□□□□□ -2.74
VPS13AQ96RL7 AC008752.3-201ENST00000588113 712 ntBASIC-2.06□□□□□ -2.74
VPS13AQ96RL7 AC253576.2-201ENST00000618815 580 ntBASIC-2.06□□□□□ -2.74
VPS13AQ96RL7 AL590396.2-201ENST00000636511 1041 ntBASIC-2.06□□□□□ -2.74
VPS13AQ96RL7 RNU6-230P-201ENST00000362457 104 ntBASIC-2.06□□□□□ -2.74
VPS13AQ96RL7 Y_RNA.419-201ENST00000384041 102 ntBASIC-2.06□□□□□ -2.74
VPS13AQ96RL7 Y_RNA.512-201ENST00000384518 102 ntBASIC-2.06□□□□□ -2.74
VPS13AQ96RL7 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC-2.06□□□□□ -2.74
VPS13AQ96RL7 AL392103.1-201ENST00000447000 198 ntBASIC-2.06□□□□□ -2.74
VPS13AQ96RL7 AL445435.1-201ENST00000604232 665 ntBASIC-2.06□□□□□ -2.74
VPS13AQ96RL7 SNORD31B-201ENST00000364977 69 ntBASIC-2.07□□□□□ -2.74
VPS13AQ96RL7 RNU6-364P-201ENST00000384387 107 ntBASIC-2.07□□□□□ -2.74
VPS13AQ96RL7 SLC2A13P1-201ENST00000531560 322 ntBASIC-2.07□□□□□ -2.74
VPS13AQ96RL7 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC-2.07□□□□□ -2.74
VPS13AQ96RL7 RNU6-655P-201ENST00000362858 107 ntBASIC-2.07□□□□□ -2.74
VPS13AQ96RL7 MIR190B-201ENST00000401119 79 ntBASIC-2.07□□□□□ -2.74
VPS13AQ96RL7 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC-2.07□□□□□ -2.74
VPS13AQ96RL7 HMGB1P51-201ENST00000605166 638 ntBASIC-2.07□□□□□ -2.74
VPS13AQ96RL7 RNU6ATAC6P-201ENST00000408132 126 ntBASIC-2.08□□□□□ -2.74
VPS13AQ96RL7 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC-2.08□□□□□ -2.74
VPS13AQ96RL7 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC-2.08□□□□□ -2.74
VPS13AQ96RL7 BTF3P15-201ENST00000455606 336 ntBASIC-2.08□□□□□ -2.74
VPS13AQ96RL7 MTND2P7-201ENST00000521337 640 ntBASIC-2.08□□□□□ -2.74
VPS13AQ96RL7 AL358072.1-201ENST00000604156 575 ntBASIC-2.08□□□□□ -2.74
VPS13AQ96RL7 SNORA70.25-201ENST00000612741 95 ntBASIC-2.08□□□□□ -2.74
VPS13AQ96RL7 AL512286.1-201ENST00000439244 400 ntBASIC-2.08□□□□□ -2.74
VPS13AQ96RL7 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC-2.08□□□□□ -2.74
VPS13AQ96RL7 AC127455.1-201ENST00000565496 145 ntBASIC-2.08□□□□□ -2.74
VPS13AQ96RL7 AC006213.4-201ENST00000616184 634 ntBASIC-2.08□□□□□ -2.74
VPS13AQ96RL7 RNU6-1331P-201ENST00000363658 106 ntBASIC-2.08□□□□□ -2.74
VPS13AQ96RL7 RNU6-934P-201ENST00000365154 107 ntBASIC-2.08□□□□□ -2.74
VPS13AQ96RL7 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-2.08□□□□□ -2.74
VPS13AQ96RL7 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC-2.09□□□□□ -2.74
VPS13AQ96RL7 SNORA72.2-201ENST00000365028 127 ntBASIC-2.09□□□□□ -2.74
VPS13AQ96RL7 RNU6-1031P-201ENST00000384773 107 ntBASIC-2.09□□□□□ -2.74
VPS13AQ96RL7 MTND1P30-201ENST00000441241 901 ntBASIC-2.09□□□□□ -2.74
VPS13AQ96RL7 AL157687.1-201ENST00000554853 619 ntBASIC-2.09□□□□□ -2.74
VPS13AQ96RL7 AC008250.2-201ENST00000615261 205 ntBASIC-2.09□□□□□ -2.74
VPS13AQ96RL7 AC104260.1-201ENST00000616660 539 ntBASIC-2.09□□□□□ -2.74
VPS13AQ96RL7 RNU6-987P-201ENST00000384759 104 ntBASIC-2.09□□□□□ -2.74
VPS13AQ96RL7 MTCYBP5-201ENST00000423752 1135 ntBASIC-2.09□□□□□ -2.74
VPS13AQ96RL7 RPS29P24-201ENST00000486345 171 ntBASIC-2.09□□□□□ -2.74
VPS13AQ96RL7 UTP23-205ENST00000520733 369 ntTSL 3 BASIC-2.09□□□□□ -2.74
VPS13AQ96RL7 AC104576.1-201ENST00000524225 88 ntBASIC-2.09□□□□□ -2.74
VPS13AQ96RL7 AC055876.5-201ENST00000605667 259 ntBASIC-2.09□□□□□ -2.74
VPS13AQ96RL7 AL118556.2-201ENST00000614375 824 ntBASIC-2.09□□□□□ -2.74
VPS13AQ96RL7 AC090772.4-201ENST00000623599 362 ntBASIC-2.09□□□□□ -2.74
VPS13AQ96RL7 Y_RNA.211-201ENST00000364164 101 ntBASIC-2.1□□□□□ -2.75
VPS13AQ96RL7 RNU6-712P-201ENST00000410558 100 ntBASIC-2.1□□□□□ -2.75
VPS13AQ96RL7 RNU7-102P-201ENST00000458948 62 ntBASIC-2.1□□□□□ -2.75
VPS13AQ96RL7 RNU6-333P-201ENST00000459117 107 ntBASIC-2.1□□□□□ -2.75
VPS13AQ96RL7 RNU7-55P-201ENST00000459426 62 ntBASIC-2.1□□□□□ -2.75
VPS13AQ96RL7 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC-2.1□□□□□ -2.75
VPS13AQ96RL7 AC093012.1-202ENST00000549403 582 ntBASIC-2.1□□□□□ -2.75
VPS13AQ96RL7 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC-2.1□□□□□ -2.75
VPS13AQ96RL7 SNORD111.1-201ENST00000516421 86 ntBASIC-2.1□□□□□ -2.75
VPS13AQ96RL7 AP000484.1-201ENST00000620067 1252 ntBASIC-2.1□□□□□ -2.75
VPS13AQ96RL7 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC-2.1□□□□□ -2.75
VPS13AQ96RL7 AC024995.1-201ENST00000523014 93 ntBASIC-2.1□□□□□ -2.75
VPS13AQ96RL7 SNORD114-29-201ENST00000364819 70 ntBASIC-2.11□□□□□ -2.75
VPS13AQ96RL7 snoU13.16-201ENST00000459350 104 ntBASIC-2.11□□□□□ -2.75
VPS13AQ96RL7 AC092470.1-201ENST00000546187 132 ntBASIC-2.11□□□□□ -2.75
VPS13AQ96RL7 AC025588.3-201ENST00000604182 274 ntBASIC-2.11□□□□□ -2.75
VPS13AQ96RL7 AC073464.1-201ENST00000429823 534 ntBASIC-2.11□□□□□ -2.75
VPS13AQ96RL7 AL162424.1-201ENST00000602325 221 ntBASIC-2.11□□□□□ -2.75
VPS13AQ96RL7 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC-2.12□□□□□ -2.75
VPS13AQ96RL7 AC013828.1-201ENST00000481845 158 ntBASIC-2.12□□□□□ -2.75
VPS13AQ96RL7 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC-2.12□□□□□ -2.75
VPS13AQ96RL7 Y_RNA.151-201ENST00000363566 112 ntBASIC-2.12□□□□□ -2.75
VPS13AQ96RL7 AL590383.1-201ENST00000428602 75 ntBASIC-2.12□□□□□ -2.75
VPS13AQ96RL7 AC008521.1-201ENST00000587471 187 ntBASIC-2.12□□□□□ -2.75
VPS13AQ96RL7 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-2.12□□□□□ -2.75
VPS13AQ96RL7 RNU6-534P-201ENST00000364877 106 ntBASIC-2.13□□□□□ -2.75
VPS13AQ96RL7 SNORA2.2-201ENST00000365473 135 ntBASIC-2.13□□□□□ -2.75
VPS13AQ96RL7 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC-2.13□□□□□ -2.75
VPS13AQ96RL7 RNA5SP20-201ENST00000515976 84 ntBASIC-2.13□□□□□ -2.75
VPS13AQ96RL7 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC-2.13□□□□□ -2.75
VPS13AQ96RL7 RNU6-621P-201ENST00000364752 109 ntBASIC-2.13□□□□□ -2.75
VPS13AQ96RL7 Y_RNA.331-201ENST00000365267 102 ntBASIC-2.13□□□□□ -2.75
VPS13AQ96RL7 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC-2.13□□□□□ -2.75
VPS13AQ96RL7 Y_RNA.513-201ENST00000384522 100 ntBASIC-2.13□□□□□ -2.75
VPS13AQ96RL7 MIR181B2-201ENST00000385004 89 ntBASIC-2.13□□□□□ -2.75
VPS13AQ96RL7 MTND1P32-201ENST00000433043 938 ntBASIC-2.13□□□□□ -2.75
VPS13AQ96RL7 Y_RNA.332-201ENST00000365271 113 ntBASIC-2.14□□□□□ -2.75
VPS13AQ96RL7 RNU6-1274P-201ENST00000384557 107 ntBASIC-2.14□□□□□ -2.75
VPS13AQ96RL7 SNORA81-201ENST00000408493 178 ntBASIC-2.14□□□□□ -2.75
VPS13AQ96RL7 AC098614.3-201ENST00000438957 440 ntBASIC-2.14□□□□□ -2.75
VPS13AQ96RL7 BNIP3P30-201ENST00000601184 574 ntBASIC-2.14□□□□□ -2.75
VPS13AQ96RL7 Y_RNA.175-201ENST00000363794 111 ntBASIC-2.14□□□□□ -2.75
VPS13AQ96RL7 snoZ40.1-201ENST00000364540 72 ntBASIC-2.14□□□□□ -2.75
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms