Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 SNORD111.1-201ENST00000516421 86 ntBASIC-1.08□□□□□ -2.58
CSMD1Q96PZ7 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC-1.08□□□□□ -2.58
CSMD1Q96PZ7 MIR4782-201ENST00000577987 79 ntBASIC-1.08□□□□□ -2.58
CSMD1Q96PZ7 AL390123.1-201ENST00000603216 237 ntBASIC-1.08□□□□□ -2.58
CSMD1Q96PZ7 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC-1.08□□□□□ -2.58
CSMD1Q96PZ7 MIR664B-201ENST00000626756 61 ntBASIC-1.08□□□□□ -2.58
CSMD1Q96PZ7 RNU6-819P-201ENST00000364116 107 ntBASIC-1.08□□□□□ -2.58
CSMD1Q96PZ7 SNORD115-44-201ENST00000365391 82 ntBASIC-1.08□□□□□ -2.58
CSMD1Q96PZ7 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.08□□□□□ -2.58
CSMD1Q96PZ7 MIR516B1-201ENST00000385211 90 ntBASIC-1.08□□□□□ -2.58
CSMD1Q96PZ7 MIR1302-7-201ENST00000408841 72 ntBASIC-1.08□□□□□ -2.58
CSMD1Q96PZ7 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC-1.08□□□□□ -2.58
CSMD1Q96PZ7 RNY4P37-201ENST00000516225 96 ntBASIC-1.08□□□□□ -2.58
CSMD1Q96PZ7 MCFD2P1-201ENST00000417812 300 ntBASIC-1.08□□□□□ -2.58
CSMD1Q96PZ7 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC-1.08□□□□□ -2.58
CSMD1Q96PZ7 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC-1.08□□□□□ -2.58
CSMD1Q96PZ7 AL139824.2-201ENST00000458731 1095 ntBASIC-1.08□□□□□ -2.58
CSMD1Q96PZ7 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC-1.08□□□□□ -2.58
CSMD1Q96PZ7 AC012433.1-201ENST00000588916 398 ntBASIC-1.08□□□□□ -2.58
CSMD1Q96PZ7 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC-1.08□□□□□ -2.58
CSMD1Q96PZ7 AL450472.1-202ENST00000637286 180 ntBASIC-1.08□□□□□ -2.58
CSMD1Q96PZ7 RNU6-1127P-201ENST00000384580 107 ntBASIC-1.09□□□□□ -2.58
CSMD1Q96PZ7 AC092447.3-201ENST00000426027 686 ntBASIC-1.09□□□□□ -2.58
CSMD1Q96PZ7 ZNF971P-201ENST00000562068 1249 ntBASIC-1.09□□□□□ -2.58
CSMD1Q96PZ7 SNORD92-201ENST00000585078 85 ntBASIC-1.09□□□□□ -2.58
CSMD1Q96PZ7 SNORD114-29-201ENST00000364819 70 ntBASIC-1.09□□□□□ -2.58
CSMD1Q96PZ7 MIR518F-201ENST00000384973 87 ntBASIC-1.09□□□□□ -2.58
CSMD1Q96PZ7 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC-1.09□□□□□ -2.58
CSMD1Q96PZ7 RNU7-73P-201ENST00000458743 63 ntBASIC-1.09□□□□□ -2.58
CSMD1Q96PZ7 RNU6-488P-201ENST00000515918 99 ntBASIC-1.09□□□□□ -2.58
CSMD1Q96PZ7 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC-1.09□□□□□ -2.58
CSMD1Q96PZ7 AP000676.1-201ENST00000533307 52 ntBASIC-1.09□□□□□ -2.58
CSMD1Q96PZ7 MIR4639-201ENST00000584938 69 ntBASIC-1.09□□□□□ -2.58
CSMD1Q96PZ7 MIR8054-201ENST00000620877 86 ntBASIC-1.09□□□□□ -2.58
CSMD1Q96PZ7 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-1.09□□□□□ -2.58
CSMD1Q96PZ7 SNORD32B-201ENST00000364460 84 ntBASIC-1.09□□□□□ -2.58
CSMD1Q96PZ7 Y_RNA.265-201ENST00000364677 108 ntBASIC-1.09□□□□□ -2.58
CSMD1Q96PZ7 snoU13.14-201ENST00000459372 104 ntBASIC-1.09□□□□□ -2.58
CSMD1Q96PZ7 AC010531.2-201ENST00000465012 153 ntBASIC-1.09□□□□□ -2.58
CSMD1Q96PZ7 AL355598.1-201ENST00000604169 202 ntBASIC-1.09□□□□□ -2.58
CSMD1Q96PZ7 AC244669.1-204ENST00000621564 178 ntBASIC-1.09□□□□□ -2.58
CSMD1Q96PZ7 SNORD24-201ENST00000383884 75 ntBASIC-1.1□□□□□ -2.59
CSMD1Q96PZ7 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC-1.1□□□□□ -2.59
CSMD1Q96PZ7 AL355143.1-201ENST00000407101 841 ntBASIC-1.1□□□□□ -2.59
CSMD1Q96PZ7 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC-1.1□□□□□ -2.59
CSMD1Q96PZ7 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC-1.1□□□□□ -2.59
CSMD1Q96PZ7 AC090617.3-201ENST00000573670 475 ntBASIC-1.1□□□□□ -2.59
CSMD1Q96PZ7 AC010975.3-201ENST00000618727 978 ntBASIC-1.1□□□□□ -2.59
CSMD1Q96PZ7 SNORD115-27-201ENST00000364430 82 ntBASIC-1.1□□□□□ -2.59
CSMD1Q96PZ7 RNU6-432P-201ENST00000384196 109 ntBASIC-1.1□□□□□ -2.59
CSMD1Q96PZ7 SNORA26.5-201ENST00000391215 123 ntBASIC-1.1□□□□□ -2.59
CSMD1Q96PZ7 SNORD110-201ENST00000408189 75 ntBASIC-1.1□□□□□ -2.59
CSMD1Q96PZ7 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC-1.1□□□□□ -2.59
CSMD1Q96PZ7 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC-1.1□□□□□ -2.59
CSMD1Q96PZ7 RNA5SP484-201ENST00000458857 111 ntBASIC-1.1□□□□□ -2.59
CSMD1Q96PZ7 AC011352.1-201ENST00000512300 793 ntBASIC-1.1□□□□□ -2.59
CSMD1Q96PZ7 RNU7-156P-201ENST00000517214 74 ntBASIC-1.1□□□□□ -2.59
CSMD1Q96PZ7 CDR1-202ENST00000625883 1485 ntBASIC-1.1□□□□□ -2.59
CSMD1Q96PZ7 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC-1.11□□□□□ -2.59
CSMD1Q96PZ7 AC079395.1-201ENST00000510981 262 ntBASIC-1.11□□□□□ -2.59
CSMD1Q96PZ7 AC105417.1-201ENST00000514691 285 ntBASIC-1.11□□□□□ -2.59
CSMD1Q96PZ7 RNU6-803P-201ENST00000516034 102 ntBASIC-1.11□□□□□ -2.59
CSMD1Q96PZ7 MTCO3P15-201ENST00000526563 574 ntBASIC-1.11□□□□□ -2.59
CSMD1Q96PZ7 LRRC6P1-201ENST00000532188 885 ntBASIC-1.11□□□□□ -2.59
CSMD1Q96PZ7 AL671309.1-201ENST00000603750 544 ntBASIC-1.11□□□□□ -2.59
CSMD1Q96PZ7 ZNF299P-201ENST00000406845 1804 ntBASIC-1.11□□□□□ -2.59
CSMD1Q96PZ7 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC-1.11□□□□□ -2.59
CSMD1Q96PZ7 RNU6-1229P-201ENST00000364295 107 ntBASIC-1.11□□□□□ -2.59
CSMD1Q96PZ7 RNU6-900P-201ENST00000384498 102 ntBASIC-1.11□□□□□ -2.59
CSMD1Q96PZ7 MIR889-201ENST00000401280 79 ntBASIC-1.11□□□□□ -2.59
CSMD1Q96PZ7 RNU6-588P-201ENST00000410281 105 ntBASIC-1.11□□□□□ -2.59
CSMD1Q96PZ7 PPP1R11P2-201ENST00000423543 382 ntBASIC-1.11□□□□□ -2.59
CSMD1Q96PZ7 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC-1.11□□□□□ -2.59
CSMD1Q96PZ7 RNU1-142P-201ENST00000516682 145 ntBASIC-1.11□□□□□ -2.59
CSMD1Q96PZ7 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC-1.11□□□□□ -2.59
CSMD1Q96PZ7 BNIP3P24-201ENST00000593398 557 ntBASIC-1.11□□□□□ -2.59
CSMD1Q96PZ7 MIR125B2-201ENST00000385128 89 ntBASIC-1.11□□□□□ -2.59
CSMD1Q96PZ7 RNU6-1250P-201ENST00000391218 107 ntBASIC-1.11□□□□□ -2.59
CSMD1Q96PZ7 RNU4-61P-201ENST00000411243 107 ntBASIC-1.11□□□□□ -2.59
CSMD1Q96PZ7 HIGD1AP15-201ENST00000416198 280 ntBASIC-1.11□□□□□ -2.59
CSMD1Q96PZ7 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC-1.11□□□□□ -2.59
CSMD1Q96PZ7 RNU6-1308P-201ENST00000516817 103 ntBASIC-1.11□□□□□ -2.59
CSMD1Q96PZ7 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC-1.11□□□□□ -2.59
CSMD1Q96PZ7 AC245014.2-201ENST00000603689 287 ntBASIC-1.11□□□□□ -2.59
CSMD1Q96PZ7 RNU1-29P-201ENST00000606574 126 ntBASIC-1.11□□□□□ -2.59
CSMD1Q96PZ7 AP001330.5-201ENST00000607176 411 ntBASIC-1.11□□□□□ -2.59
CSMD1Q96PZ7 AC087683.2-201ENST00000611384 326 ntBASIC-1.11□□□□□ -2.59
CSMD1Q96PZ7 SNORA70.25-201ENST00000612741 95 ntBASIC-1.11□□□□□ -2.59
CSMD1Q96PZ7 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.11□□□□□ -2.59
CSMD1Q96PZ7 RNU6-1125P-201ENST00000363601 107 ntBASIC-1.12□□□□□ -2.59
CSMD1Q96PZ7 MIR520C-201ENST00000385005 87 ntBASIC-1.12□□□□□ -2.59
CSMD1Q96PZ7 RNU7-94P-201ENST00000459576 63 ntBASIC-1.12□□□□□ -2.59
CSMD1Q96PZ7 RNU6-410P-201ENST00000517006 107 ntBASIC-1.12□□□□□ -2.59
CSMD1Q96PZ7 SNORA74.3-201ENST00000517108 154 ntBASIC-1.12□□□□□ -2.59
CSMD1Q96PZ7 AC121247.2-201ENST00000604776 136 ntBASIC-1.12□□□□□ -2.59
CSMD1Q96PZ7 AL136221.1-201ENST00000621449 509 ntBASIC-1.12□□□□□ -2.59
CSMD1Q96PZ7 AC006927.4-201ENST00000639187 543 ntBASIC-1.12□□□□□ -2.59
CSMD1Q96PZ7 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC-1.12□□□□□ -2.59
CSMD1Q96PZ7 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-1.12□□□□□ -2.59
CSMD1Q96PZ7 AC104820.1-201ENST00000624183 307 ntBASIC-1.12□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms