Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 MIR5094-201ENST00000578766 85 ntBASIC1.88□□□□□ -2.11
NEK1Q96PY6 MIR4285-201ENST00000581001 85 ntBASIC1.88□□□□□ -2.11
NEK1Q96PY6 AL512598.1-201ENST00000610158 273 ntBASIC1.88□□□□□ -2.11
NEK1Q96PY6 AC087588.2-201ENST00000617667 426 ntBASIC1.88□□□□□ -2.11
NEK1Q96PY6 AC022513.1-201ENST00000624512 117 ntBASIC1.88□□□□□ -2.11
NEK1Q96PY6 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.88□□□□□ -2.11
NEK1Q96PY6 AC073544.1-201ENST00000600110 1595 ntBASIC1.88□□□□□ -2.11
NEK1Q96PY6 RNU4-79P-201ENST00000362764 141 ntBASIC1.87□□□□□ -2.11
NEK1Q96PY6 RNU6-862P-201ENST00000362804 105 ntBASIC1.87□□□□□ -2.11
NEK1Q96PY6 U3.8-201ENST00000363675 217 ntBASIC1.87□□□□□ -2.11
NEK1Q96PY6 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.87□□□□□ -2.11
NEK1Q96PY6 MIR559-201ENST00000385188 96 ntBASIC1.87□□□□□ -2.11
NEK1Q96PY6 AC009310.1-201ENST00000414414 451 ntBASIC1.87□□□□□ -2.11
NEK1Q96PY6 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.87□□□□□ -2.11
NEK1Q96PY6 AC144568.1-201ENST00000520139 137 ntBASIC1.87□□□□□ -2.11
NEK1Q96PY6 AK6P2-201ENST00000549020 471 ntBASIC1.87□□□□□ -2.11
NEK1Q96PY6 AC022254.1-201ENST00000567857 235 ntBASIC1.87□□□□□ -2.11
NEK1Q96PY6 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.87□□□□□ -2.11
NEK1Q96PY6 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
NEK1Q96PY6 MIR1253-201ENST00000408273 105 ntBASIC1.86□□□□□ -2.11
NEK1Q96PY6 Y_RNA.592-201ENST00000410274 109 ntBASIC1.86□□□□□ -2.11
NEK1Q96PY6 AC022028.1-201ENST00000412054 408 ntBASIC1.86□□□□□ -2.11
NEK1Q96PY6 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.86□□□□□ -2.11
NEK1Q96PY6 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.86□□□□□ -2.11
NEK1Q96PY6 UQCRBP2-201ENST00000447827 297 ntBASIC1.86□□□□□ -2.11
NEK1Q96PY6 AC008834.1-201ENST00000511612 175 ntBASIC1.86□□□□□ -2.11
NEK1Q96PY6 AC091144.1-201ENST00000519573 138 ntBASIC1.86□□□□□ -2.11
NEK1Q96PY6 SNORA4-201ENST00000584302 138 ntBASIC1.86□□□□□ -2.11
NEK1Q96PY6 AL117336.2-201ENST00000602435 335 ntBASIC1.86□□□□□ -2.11
NEK1Q96PY6 AC080078.3-201ENST00000605407 463 ntBASIC1.86□□□□□ -2.11
NEK1Q96PY6 RNU6-1145P-201ENST00000384246 107 ntBASIC1.85□□□□□ -2.11
NEK1Q96PY6 Y_RNA.579-201ENST00000390939 94 ntBASIC1.85□□□□□ -2.11
NEK1Q96PY6 MIR1185-2-201ENST00000408687 86 ntBASIC1.85□□□□□ -2.11
NEK1Q96PY6 AC096644.2-201ENST00000429278 159 ntBASIC1.85□□□□□ -2.11
NEK1Q96PY6 HMGN2P34-201ENST00000437647 269 ntBASIC1.85□□□□□ -2.11
NEK1Q96PY6 AC099799.1-201ENST00000439809 192 ntBASIC1.85□□□□□ -2.11
NEK1Q96PY6 RNU7-152P-201ENST00000458982 64 ntBASIC1.85□□□□□ -2.11
NEK1Q96PY6 RNU6-221P-201ENST00000459541 99 ntBASIC1.85□□□□□ -2.11
NEK1Q96PY6 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.85□□□□□ -2.11
NEK1Q96PY6 AC027575.1-201ENST00000481064 460 ntBASIC1.85□□□□□ -2.11
NEK1Q96PY6 Y_RNA.661-201ENST00000516003 99 ntBASIC1.85□□□□□ -2.11
NEK1Q96PY6 SNORA44.1-201ENST00000517031 108 ntBASIC1.85□□□□□ -2.11
NEK1Q96PY6 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.85□□□□□ -2.11
NEK1Q96PY6 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.85□□□□□ -2.11
NEK1Q96PY6 AL357075.2-201ENST00000614906 189 ntBASIC1.85□□□□□ -2.11
NEK1Q96PY6 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.84□□□□□ -2.11
NEK1Q96PY6 RNU1-96P-201ENST00000364163 162 ntBASIC1.84□□□□□ -2.11
NEK1Q96PY6 Y_RNA.428-201ENST00000384078 102 ntBASIC1.84□□□□□ -2.11
NEK1Q96PY6 Y_RNA.463-201ENST00000384271 102 ntBASIC1.84□□□□□ -2.11
NEK1Q96PY6 RNU6-318P-201ENST00000384283 103 ntBASIC1.84□□□□□ -2.11
NEK1Q96PY6 RPS20P15-201ENST00000412792 311 ntBASIC1.84□□□□□ -2.11
NEK1Q96PY6 MTND4P28-201ENST00000426217 387 ntBASIC1.84□□□□□ -2.11
NEK1Q96PY6 AC099677.2-201ENST00000436385 175 ntBASIC1.84□□□□□ -2.11
NEK1Q96PY6 PCNPP5-201ENST00000452246 481 ntBASIC1.84□□□□□ -2.11
NEK1Q96PY6 RNU7-95P-201ENST00000459222 64 ntBASIC1.84□□□□□ -2.11
NEK1Q96PY6 RN7SKP49-201ENST00000516675 260 ntBASIC1.84□□□□□ -2.11
NEK1Q96PY6 MIR2355-201ENST00000517199 87 ntBASIC1.84□□□□□ -2.11
NEK1Q96PY6 AC025647.1-201ENST00000517879 253 ntBASIC1.84□□□□□ -2.11
NEK1Q96PY6 AC010900.2-201ENST00000604508 210 ntBASIC1.84□□□□□ -2.11
NEK1Q96PY6 MIR6504-201ENST00000613520 61 ntBASIC1.84□□□□□ -2.11
NEK1Q96PY6 RNU6-1301P-201ENST00000362724 104 ntBASIC1.83□□□□□ -2.12
NEK1Q96PY6 RNU6-1240P-201ENST00000365155 104 ntBASIC1.83□□□□□ -2.12
NEK1Q96PY6 Y_RNA.498-201ENST00000384460 102 ntBASIC1.83□□□□□ -2.12
NEK1Q96PY6 RNU6-417P-201ENST00000384712 107 ntBASIC1.83□□□□□ -2.12
NEK1Q96PY6 SNORD12B-201ENST00000410433 91 ntBASIC1.83□□□□□ -2.12
NEK1Q96PY6 Y_RNA.604-201ENST00000410574 102 ntBASIC1.83□□□□□ -2.12
NEK1Q96PY6 AC008134.1-201ENST00000420943 193 ntBASIC1.83□□□□□ -2.12
NEK1Q96PY6 AF228730.4-201ENST00000421457 183 ntBASIC1.83□□□□□ -2.12
NEK1Q96PY6 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.83□□□□□ -2.12
NEK1Q96PY6 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.83□□□□□ -2.12
NEK1Q96PY6 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.83□□□□□ -2.12
NEK1Q96PY6 NDUFB4P10-201ENST00000452541 359 ntBASIC1.83□□□□□ -2.12
NEK1Q96PY6 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.83□□□□□ -2.12
NEK1Q96PY6 RNU6-1146P-201ENST00000516282 102 ntBASIC1.83□□□□□ -2.12
NEK1Q96PY6 SNORD116.3-201ENST00000517176 78 ntBASIC1.83□□□□□ -2.12
NEK1Q96PY6 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.83□□□□□ -2.12
NEK1Q96PY6 CYCSP23-201ENST00000519781 313 ntBASIC1.83□□□□□ -2.12
NEK1Q96PY6 AC103810.8-201ENST00000607347 118 ntBASIC1.83□□□□□ -2.12
NEK1Q96PY6 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.83□□□□□ -2.12
NEK1Q96PY6 MIR338-201ENST00000636369 67 ntBASIC1.83□□□□□ -2.12
NEK1Q96PY6 AL391987.6-201ENST00000305671 199 ntBASIC1.82□□□□□ -2.12
NEK1Q96PY6 MIR126-201ENST00000362291 85 ntBASIC1.82□□□□□ -2.12
NEK1Q96PY6 snoU2-30.2-201ENST00000362805 70 ntBASIC1.82□□□□□ -2.12
NEK1Q96PY6 Y_RNA.327-201ENST00000365201 102 ntBASIC1.82□□□□□ -2.12
NEK1Q96PY6 Y_RNA.419-201ENST00000384041 102 ntBASIC1.82□□□□□ -2.12
NEK1Q96PY6 RNU6-926P-201ENST00000384075 107 ntBASIC1.82□□□□□ -2.12
NEK1Q96PY6 MIR628-201ENST00000385229 95 ntBASIC1.82□□□□□ -2.12
NEK1Q96PY6 MIR934-201ENST00000401241 83 ntBASIC1.82□□□□□ -2.12
NEK1Q96PY6 MIR1276-201ENST00000408707 83 ntBASIC1.82□□□□□ -2.12
NEK1Q96PY6 AC016909.1-201ENST00000415916 166 ntBASIC1.82□□□□□ -2.12
NEK1Q96PY6 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.82□□□□□ -2.12
NEK1Q96PY6 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.82□□□□□ -2.12
NEK1Q96PY6 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.82□□□□□ -2.12
NEK1Q96PY6 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.82□□□□□ -2.12
NEK1Q96PY6 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.82□□□□□ -2.12
NEK1Q96PY6 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
NEK1Q96PY6 RNU6-1266P-201ENST00000362794 105 ntBASIC1.81□□□□□ -2.12
NEK1Q96PY6 RNY1P14-201ENST00000384426 108 ntBASIC1.81□□□□□ -2.12
NEK1Q96PY6 RNU6-997P-201ENST00000384725 107 ntBASIC1.81□□□□□ -2.12
NEK1Q96PY6 AL117342.1-201ENST00000404861 406 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms