Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
SYNGAP1Q96PV0 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SYNGAP1Q96PV0 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
SYNGAP1Q96PV0 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
SYNGAP1Q96PV0 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.51□□□□□ -1.85
SYNGAP1Q96PV0 Y_RNA.508-201ENST00000384502 114 ntBASIC3.51□□□□□ -1.85
SYNGAP1Q96PV0 RNU6-768P-201ENST00000384683 107 ntBASIC3.51□□□□□ -1.85
SYNGAP1Q96PV0 MIR767-201ENST00000390228 109 ntBASIC3.51□□□□□ -1.85
SYNGAP1Q96PV0 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
SYNGAP1Q96PV0 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
SYNGAP1Q96PV0 ARF4P2-201ENST00000430209 526 ntBASIC3.51□□□□□ -1.85
SYNGAP1Q96PV0 AL139132.1-201ENST00000431587 344 ntBASIC3.51□□□□□ -1.85
SYNGAP1Q96PV0 RPS27P1-201ENST00000450552 247 ntBASIC3.51□□□□□ -1.85
SYNGAP1Q96PV0 RNU7-14P-201ENST00000459331 62 ntBASIC3.51□□□□□ -1.85
SYNGAP1Q96PV0 AC080013.2-201ENST00000460866 323 ntBASIC3.51□□□□□ -1.85
SYNGAP1Q96PV0 AP001328.1-201ENST00000528550 176 ntBASIC3.51□□□□□ -1.85
SYNGAP1Q96PV0 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.51□□□□□ -1.85
SYNGAP1Q96PV0 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.51□□□□□ -1.85
SYNGAP1Q96PV0 RPL30P11-203ENST00000598995 310 ntBASIC3.51□□□□□ -1.85
SYNGAP1Q96PV0 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.51□□□□□ -1.85
SYNGAP1Q96PV0 AL590808.1-201ENST00000618696 141 ntBASIC3.51□□□□□ -1.85
SYNGAP1Q96PV0 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.51□□□□□ -1.85
SYNGAP1Q96PV0 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SYNGAP1Q96PV0 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SYNGAP1Q96PV0 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
SYNGAP1Q96PV0 MIR586-201ENST00000385035 97 ntBASIC3.5□□□□□ -1.85
SYNGAP1Q96PV0 AC097463.2-201ENST00000421074 142 ntBASIC3.5□□□□□ -1.85
SYNGAP1Q96PV0 RNU7-57P-201ENST00000459540 60 ntBASIC3.5□□□□□ -1.85
SYNGAP1Q96PV0 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.5□□□□□ -1.85
SYNGAP1Q96PV0 RNU6-1337P-201ENST00000516525 95 ntBASIC3.5□□□□□ -1.85
SYNGAP1Q96PV0 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.5□□□□□ -1.85
SYNGAP1Q96PV0 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SYNGAP1Q96PV0 MIR4753-201ENST00000585119 83 ntBASIC3.5□□□□□ -1.85
SYNGAP1Q96PV0 AL138880.2-201ENST00000616214 239 ntBASIC3.5□□□□□ -1.85
SYNGAP1Q96PV0 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.5□□□□□ -1.85
SYNGAP1Q96PV0 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SYNGAP1Q96PV0 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.5□□□□□ -1.85
SYNGAP1Q96PV0 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.49□□□□□ -1.85
SYNGAP1Q96PV0 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.49□□□□□ -1.85
SYNGAP1Q96PV0 MIR22-201ENST00000362190 85 ntBASIC3.49□□□□□ -1.85
SYNGAP1Q96PV0 SNORA79-201ENST00000408376 140 ntBASIC3.49□□□□□ -1.85
SYNGAP1Q96PV0 MIR1287-201ENST00000408492 90 ntBASIC3.49□□□□□ -1.85
SYNGAP1Q96PV0 MIR1185-2-201ENST00000408687 86 ntBASIC3.49□□□□□ -1.85
SYNGAP1Q96PV0 RNU2-52P-201ENST00000410680 190 ntBASIC3.49□□□□□ -1.85
SYNGAP1Q96PV0 EEF1A1P41-201ENST00000414667 207 ntBASIC3.49□□□□□ -1.85
SYNGAP1Q96PV0 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC3.49□□□□□ -1.85
SYNGAP1Q96PV0 RPL23AP58-201ENST00000440453 469 ntBASIC3.49□□□□□ -1.85
SYNGAP1Q96PV0 AC092991.1-201ENST00000477176 376 ntBASIC3.49□□□□□ -1.85
SYNGAP1Q96PV0 RNU1-143P-201ENST00000516296 146 ntBASIC3.49□□□□□ -1.85
SYNGAP1Q96PV0 SNORA31.21-201ENST00000517180 77 ntBASIC3.49□□□□□ -1.85
SYNGAP1Q96PV0 AC068657.1-201ENST00000520807 306 ntBASIC3.49□□□□□ -1.85
SYNGAP1Q96PV0 AC079598.5-201ENST00000547460 117 ntBASIC3.49□□□□□ -1.85
SYNGAP1Q96PV0 MIR5688-201ENST00000580619 83 ntBASIC3.49□□□□□ -1.85
SYNGAP1Q96PV0 POLR3GP1-201ENST00000594073 261 ntBASIC3.49□□□□□ -1.85
SYNGAP1Q96PV0 U1.23-201ENST00000610293 146 ntBASIC3.49□□□□□ -1.85
SYNGAP1Q96PV0 uc_338.14-201ENST00000613162 166 ntBASIC3.49□□□□□ -1.85
SYNGAP1Q96PV0 RNU1-68P-201ENST00000615382 146 ntBASIC3.49□□□□□ -1.85
SYNGAP1Q96PV0 U1.39-201ENST00000621562 146 ntBASIC3.49□□□□□ -1.85
SYNGAP1Q96PV0 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.49□□□□□ -1.85
SYNGAP1Q96PV0 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.49□□□□□ -1.85
SYNGAP1Q96PV0 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SYNGAP1Q96PV0 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SYNGAP1Q96PV0 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.49□□□□□ -1.85
SYNGAP1Q96PV0 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.49□□□□□ -1.85
SYNGAP1Q96PV0 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
SYNGAP1Q96PV0 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SYNGAP1Q96PV0 RNU6-1080P-201ENST00000383982 107 ntBASIC3.48□□□□□ -1.85
SYNGAP1Q96PV0 SNORA20B-201ENST00000384220 132 ntBASIC3.48□□□□□ -1.85
SYNGAP1Q96PV0 SNORD116-13-201ENST00000384408 92 ntBASIC3.48□□□□□ -1.85
SYNGAP1Q96PV0 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.48□□□□□ -1.85
SYNGAP1Q96PV0 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.48□□□□□ -1.85
SYNGAP1Q96PV0 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.48□□□□□ -1.85
SYNGAP1Q96PV0 HMGN2P9-201ENST00000476875 229 ntBASIC3.48□□□□□ -1.85
SYNGAP1Q96PV0 RPL23AP54-201ENST00000495129 419 ntBASIC3.48□□□□□ -1.85
SYNGAP1Q96PV0 AC108210.2-201ENST00000503681 201 ntBASIC3.48□□□□□ -1.85
SYNGAP1Q96PV0 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.48□□□□□ -1.85
SYNGAP1Q96PV0 RNA5SP217-201ENST00000515959 91 ntBASIC3.48□□□□□ -1.85
SYNGAP1Q96PV0 RNU7-115P-201ENST00000516433 55 ntBASIC3.48□□□□□ -1.85
SYNGAP1Q96PV0 MIR4765-201ENST00000585007 77 ntBASIC3.48□□□□□ -1.85
SYNGAP1Q96PV0 RPL17P51-201ENST00000605218 238 ntBASIC3.48□□□□□ -1.85
SYNGAP1Q96PV0 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
SYNGAP1Q96PV0 MIR181A2-201ENST00000384863 110 ntBASIC3.47□□□□□ -1.85
SYNGAP1Q96PV0 SNORD67-201ENST00000390833 111 ntBASIC3.47□□□□□ -1.85
SYNGAP1Q96PV0 Y_RNA.587-201ENST00000391210 103 ntBASIC3.47□□□□□ -1.85
SYNGAP1Q96PV0 RNA5SP354-201ENST00000391247 136 ntBASIC3.47□□□□□ -1.85
SYNGAP1Q96PV0 MIR873-201ENST00000401120 77 ntBASIC3.47□□□□□ -1.85
SYNGAP1Q96PV0 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.47□□□□□ -1.85
SYNGAP1Q96PV0 RNA5SP76-201ENST00000516277 87 ntBASIC3.47□□□□□ -1.85
SYNGAP1Q96PV0 AC090142.3-201ENST00000519012 385 ntBASIC3.47□□□□□ -1.85
SYNGAP1Q96PV0 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SYNGAP1Q96PV0 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.47□□□□□ -1.85
SYNGAP1Q96PV0 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
SYNGAP1Q96PV0 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
SYNGAP1Q96PV0 AC062016.1-201ENST00000355719 319 ntBASIC3.46□□□□□ -1.85
SYNGAP1Q96PV0 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.85
SYNGAP1Q96PV0 Y_RNA.393-201ENST00000383936 102 ntBASIC3.46□□□□□ -1.85
SYNGAP1Q96PV0 RNU6-1056P-201ENST00000383996 107 ntBASIC3.46□□□□□ -1.85
SYNGAP1Q96PV0 AL512604.1-201ENST00000404812 257 ntBASIC3.46□□□□□ -1.85
SYNGAP1Q96PV0 AL355796.1-201ENST00000406706 323 ntBASIC3.46□□□□□ -1.85
SYNGAP1Q96PV0 RNU6-57P-201ENST00000411348 103 ntBASIC3.46□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms