Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 SNORA70.7-201ENST00000384159 133 ntBASIC1.02□□□□□ -2.25
COL21A1Q96P44 Y_RNA.473-201ENST00000384333 102 ntBASIC1.02□□□□□ -2.25
COL21A1Q96P44 RNU6-1105P-201ENST00000384774 107 ntBASIC1.02□□□□□ -2.25
COL21A1Q96P44 MIR513A1-201ENST00000385138 129 ntBASIC1.02□□□□□ -2.25
COL21A1Q96P44 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
COL21A1Q96P44 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
COL21A1Q96P44 MIR548K-201ENST00000408406 116 ntBASIC1.02□□□□□ -2.25
COL21A1Q96P44 MIR548J-201ENST00000408833 112 ntBASIC1.02□□□□□ -2.25
COL21A1Q96P44 AC138393.2-201ENST00000414742 246 ntBASIC1.02□□□□□ -2.25
COL21A1Q96P44 MRPL35P3-201ENST00000421557 364 ntBASIC1.02□□□□□ -2.25
COL21A1Q96P44 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.02□□□□□ -2.25
COL21A1Q96P44 HMGN2P34-201ENST00000437647 269 ntBASIC1.02□□□□□ -2.25
COL21A1Q96P44 AL135790.2-201ENST00000437701 267 ntBASIC1.02□□□□□ -2.25
COL21A1Q96P44 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.02□□□□□ -2.25
COL21A1Q96P44 AL353572.1-201ENST00000442490 417 ntBASIC1.02□□□□□ -2.25
COL21A1Q96P44 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.02□□□□□ -2.25
COL21A1Q96P44 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.02□□□□□ -2.25
COL21A1Q96P44 MTCO3P8-201ENST00000453691 755 ntBASIC1.02□□□□□ -2.25
COL21A1Q96P44 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.02□□□□□ -2.25
COL21A1Q96P44 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.02□□□□□ -2.25
COL21A1Q96P44 HMGN1P12-201ENST00000499125 195 ntBASIC1.02□□□□□ -2.25
COL21A1Q96P44 AC116353.2-201ENST00000505332 712 ntBASIC1.02□□□□□ -2.25
COL21A1Q96P44 PRDX4P1-201ENST00000507189 574 ntBASIC1.02□□□□□ -2.25
COL21A1Q96P44 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.02□□□□□ -2.25
COL21A1Q96P44 SNORA20.3-201ENST00000516880 132 ntBASIC1.02□□□□□ -2.25
COL21A1Q96P44 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.02□□□□□ -2.25
COL21A1Q96P44 AC019288.1-201ENST00000557918 224 ntBASIC1.02□□□□□ -2.25
COL21A1Q96P44 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.02□□□□□ -2.25
COL21A1Q96P44 MIR4295-201ENST00000585286 85 ntBASIC1.02□□□□□ -2.25
COL21A1Q96P44 MIR6128-201ENST00000615528 109 ntBASIC1.02□□□□□ -2.25
COL21A1Q96P44 AL078596.1-201ENST00000624856 447 ntBASIC1.02□□□□□ -2.25
COL21A1Q96P44 AC099654.14-201ENST00000638599 341 ntBASIC1.02□□□□□ -2.25
COL21A1Q96P44 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.01□□□□□ -2.25
COL21A1Q96P44 SNORD115-8-201ENST00000363856 82 ntBASIC1.01□□□□□ -2.25
COL21A1Q96P44 RNU6-1305P-201ENST00000364353 104 ntBASIC1.01□□□□□ -2.25
COL21A1Q96P44 Y_RNA.303-201ENST00000364998 94 ntBASIC1.01□□□□□ -2.25
COL21A1Q96P44 SNORD115-38-201ENST00000365037 82 ntBASIC1.01□□□□□ -2.25
COL21A1Q96P44 RNU6-842P-201ENST00000384269 107 ntBASIC1.01□□□□□ -2.25
COL21A1Q96P44 MIR487A-201ENST00000385009 80 ntBASIC1.01□□□□□ -2.25
COL21A1Q96P44 MIR549A-201ENST00000385268 96 ntBASIC1.01□□□□□ -2.25
COL21A1Q96P44 AL139396.1-201ENST00000421137 167 ntBASIC1.01□□□□□ -2.25
COL21A1Q96P44 USP9YP30-201ENST00000430729 455 ntBASIC1.01□□□□□ -2.25
COL21A1Q96P44 AC005534.2-201ENST00000431047 433 ntBASIC1.01□□□□□ -2.25
COL21A1Q96P44 RPS3AP52-201ENST00000435639 297 ntBASIC1.01□□□□□ -2.25
COL21A1Q96P44 NDUFB4P10-201ENST00000452541 359 ntBASIC1.01□□□□□ -2.25
COL21A1Q96P44 COX6CP14-201ENST00000469580 174 ntBASIC1.01□□□□□ -2.25
COL21A1Q96P44 AC087343.1-201ENST00000477341 475 ntBASIC1.01□□□□□ -2.25
COL21A1Q96P44 RPL23AP75-201ENST00000491601 451 ntBASIC1.01□□□□□ -2.25
COL21A1Q96P44 AC103851.1-201ENST00000506833 274 ntBASIC1.01□□□□□ -2.25
COL21A1Q96P44 AC046134.1-201ENST00000514454 666 ntBASIC1.01□□□□□ -2.25
COL21A1Q96P44 AC019176.1-201ENST00000518519 225 ntBASIC1.01□□□□□ -2.25
COL21A1Q96P44 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC1.01□□□□□ -2.25
COL21A1Q96P44 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.01□□□□□ -2.25
COL21A1Q96P44 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.01□□□□□ -2.25
COL21A1Q96P44 AC103810.9-201ENST00000606688 112 ntBASIC1.01□□□□□ -2.25
COL21A1Q96P44 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.01□□□□□ -2.25
COL21A1Q96P44 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.01□□□□□ -2.25
COL21A1Q96P44 AC040896.1-201ENST00000613819 479 ntBASIC1.01□□□□□ -2.25
COL21A1Q96P44 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.01□□□□□ -2.25
COL21A1Q96P44 AC022306.2-201ENST00000617563 647 ntBASIC1.01□□□□□ -2.25
COL21A1Q96P44 MIR8065-201ENST00000620577 100 ntBASIC1.01□□□□□ -2.25
COL21A1Q96P44 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.01□□□□□ -2.25
COL21A1Q96P44 snoZ196.1-201ENST00000625269 89 ntBASIC1.01□□□□□ -2.25
COL21A1Q96P44 SCARNA4-201ENST00000629045 128 ntBASIC1.01□□□□□ -2.25
COL21A1Q96P44 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
COL21A1Q96P44 RNU6-137P-201ENST00000363680 108 ntBASIC1□□□□□ -2.25
COL21A1Q96P44 Y_RNA.166-201ENST00000363730 102 ntBASIC1□□□□□ -2.25
COL21A1Q96P44 SNORD81.2-201ENST00000365153 76 ntBASIC1□□□□□ -2.25
COL21A1Q96P44 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1□□□□□ -2.25
COL21A1Q96P44 RNY1P4-201ENST00000384595 115 ntBASIC1□□□□□ -2.25
COL21A1Q96P44 RNA5SP323-201ENST00000391094 133 ntBASIC1□□□□□ -2.25
COL21A1Q96P44 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1□□□□□ -2.25
COL21A1Q96P44 Z82188.1-201ENST00000436709 154 ntBASIC1□□□□□ -2.25
COL21A1Q96P44 PGBD4P5-201ENST00000445958 426 ntBASIC1□□□□□ -2.25
COL21A1Q96P44 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1□□□□□ -2.25
COL21A1Q96P44 RNU7-57P-201ENST00000459540 60 ntBASIC1□□□□□ -2.25
COL21A1Q96P44 MTND4P17-201ENST00000470444 350 ntBASIC1□□□□□ -2.25
COL21A1Q96P44 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1□□□□□ -2.25
COL21A1Q96P44 ACA59.1-201ENST00000515966 143 ntBASIC1□□□□□ -2.25
COL21A1Q96P44 RNU1-54P-201ENST00000517181 120 ntBASIC1□□□□□ -2.25
COL21A1Q96P44 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1□□□□□ -2.25
COL21A1Q96P44 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1□□□□□ -2.25
COL21A1Q96P44 AL512310.8-201ENST00000550183 120 ntBASIC1□□□□□ -2.25
COL21A1Q96P44 MIR4801-201ENST00000582704 82 ntBASIC1□□□□□ -2.25
COL21A1Q96P44 RN7SL793P-201ENST00000583259 296 ntBASIC1□□□□□ -2.25
COL21A1Q96P44 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1□□□□□ -2.25
COL21A1Q96P44 RBM11P1-201ENST00000604951 799 ntBASIC1□□□□□ -2.25
COL21A1Q96P44 AC080078.3-201ENST00000605407 463 ntBASIC1□□□□□ -2.25
COL21A1Q96P44 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1□□□□□ -2.25
COL21A1Q96P44 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1□□□□□ -2.25
COL21A1Q96P44 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
COL21A1Q96P44 Y_RNA.48-201ENST00000362710 103 ntBASIC0.99□□□□□ -2.25
COL21A1Q96P44 Y_RNA.88-201ENST00000363029 99 ntBASIC0.99□□□□□ -2.25
COL21A1Q96P44 SNORD115-32-201ENST00000364079 82 ntBASIC0.99□□□□□ -2.25
COL21A1Q96P44 RNU6-1240P-201ENST00000365155 104 ntBASIC0.99□□□□□ -2.25
COL21A1Q96P44 SNORA22-201ENST00000383907 134 ntBASIC0.99□□□□□ -2.25
COL21A1Q96P44 Y_RNA.533-201ENST00000384596 114 ntBASIC0.99□□□□□ -2.25
COL21A1Q96P44 SNORA22C-201ENST00000384614 134 ntBASIC0.99□□□□□ -2.25
COL21A1Q96P44 RNU4-14P-201ENST00000410858 122 ntBASIC0.99□□□□□ -2.25
COL21A1Q96P44 AC074085.1-201ENST00000413598 418 ntBASIC0.99□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 169.2 ms