Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.96□□□□□ -2.26
RPRD1AQ96P16 MIR4661-201ENST00000582720 75 ntBASIC0.96□□□□□ -2.26
RPRD1AQ96P16 MIR4452-201ENST00000583004 71 ntBASIC0.96□□□□□ -2.26
RPRD1AQ96P16 MIR3942-201ENST00000585264 109 ntBASIC0.96□□□□□ -2.26
RPRD1AQ96P16 AL162424.1-201ENST00000602325 221 ntBASIC0.96□□□□□ -2.26
RPRD1AQ96P16 AC136443.5-201ENST00000603741 370 ntBASIC0.96□□□□□ -2.26
RPRD1AQ96P16 Y_RNA.184-201ENST00000363884 108 ntBASIC0.95□□□□□ -2.26
RPRD1AQ96P16 RNU1-93P-201ENST00000364704 169 ntBASIC0.95□□□□□ -2.26
RPRD1AQ96P16 SNORD114-22-201ENST00000365423 72 ntBASIC0.95□□□□□ -2.26
RPRD1AQ96P16 MIR532-201ENST00000385025 91 ntBASIC0.95□□□□□ -2.26
RPRD1AQ96P16 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.95□□□□□ -2.26
RPRD1AQ96P16 POLR2J4-204ENST00000418424 324 ntBASIC0.95□□□□□ -2.26
RPRD1AQ96P16 HSPE1P13-201ENST00000451143 297 ntBASIC0.95□□□□□ -2.26
RPRD1AQ96P16 RPS27P22-201ENST00000478056 241 ntBASIC0.95□□□□□ -2.26
RPRD1AQ96P16 AC010469.2-201ENST00000496412 480 ntBASIC0.95□□□□□ -2.26
RPRD1AQ96P16 AC105758.1-201ENST00000506038 399 ntBASIC0.95□□□□□ -2.26
RPRD1AQ96P16 RN7SKP49-201ENST00000516675 260 ntBASIC0.95□□□□□ -2.26
RPRD1AQ96P16 CBX3P8-201ENST00000532412 525 ntBASIC0.95□□□□□ -2.26
RPRD1AQ96P16 GHRLOS.1-201ENST00000610995 70 ntBASIC0.95□□□□□ -2.26
RPRD1AQ96P16 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.95□□□□□ -2.26
RPRD1AQ96P16 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.95□□□□□ -2.26
RPRD1AQ96P16 RNU4-79P-201ENST00000362764 141 ntBASIC0.94□□□□□ -2.26
RPRD1AQ96P16 RNU5F-3P-201ENST00000363767 117 ntBASIC0.94□□□□□ -2.26
RPRD1AQ96P16 Y_RNA.405-201ENST00000383979 100 ntBASIC0.94□□□□□ -2.26
RPRD1AQ96P16 Y_RNA.451-201ENST00000384200 100 ntBASIC0.94□□□□□ -2.26
RPRD1AQ96P16 Y_RNA.524-201ENST00000384564 100 ntBASIC0.94□□□□□ -2.26
RPRD1AQ96P16 Y_RNA.559-201ENST00000384686 107 ntBASIC0.94□□□□□ -2.26
RPRD1AQ96P16 Y_RNA.561-201ENST00000384694 100 ntBASIC0.94□□□□□ -2.26
RPRD1AQ96P16 MIR19B1-201ENST00000384829 87 ntBASIC0.94□□□□□ -2.26
RPRD1AQ96P16 MIR653-201ENST00000385279 96 ntBASIC0.94□□□□□ -2.26
RPRD1AQ96P16 RNU6-910P-201ENST00000390844 107 ntBASIC0.94□□□□□ -2.26
RPRD1AQ96P16 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.94□□□□□ -2.26
RPRD1AQ96P16 AC080078.2-201ENST00000603766 501 ntBASIC0.94□□□□□ -2.26
RPRD1AQ96P16 AF250324.2-201ENST00000608299 610 ntBASIC0.94□□□□□ -2.26
RPRD1AQ96P16 AC010999.1-201ENST00000611856 324 ntBASIC0.94□□□□□ -2.26
RPRD1AQ96P16 AC006435.5-201ENST00000624486 112 ntBASIC0.94□□□□□ -2.26
RPRD1AQ96P16 MIR6079-201ENST00000635807 62 ntBASIC0.94□□□□□ -2.26
RPRD1AQ96P16 AC024614.3-201ENST00000637860 256 ntBASIC0.94□□□□□ -2.26
RPRD1AQ96P16 AC027514.1-201ENST00000588561 1603 ntBASIC0.93□□□□□ -2.26
RPRD1AQ96P16 Y_RNA.41-201ENST00000362646 102 ntBASIC0.93□□□□□ -2.26
RPRD1AQ96P16 SNORD116-2-201ENST00000384274 95 ntBASIC0.93□□□□□ -2.26
RPRD1AQ96P16 SNORD116-6-201ENST00000384711 96 ntBASIC0.93□□□□□ -2.26
RPRD1AQ96P16 RNU6-1054P-201ENST00000411293 104 ntBASIC0.93□□□□□ -2.26
RPRD1AQ96P16 CALM2P4-201ENST00000430810 426 ntBASIC0.93□□□□□ -2.26
RPRD1AQ96P16 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.93□□□□□ -2.26
RPRD1AQ96P16 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC0.93□□□□□ -2.26
RPRD1AQ96P16 AC097462.1-201ENST00000514125 324 ntBASIC0.93□□□□□ -2.26
RPRD1AQ96P16 RNU7-175P-201ENST00000515915 61 ntBASIC0.93□□□□□ -2.26
RPRD1AQ96P16 SNORA31.4-201ENST00000516049 129 ntBASIC0.93□□□□□ -2.26
RPRD1AQ96P16 RNA5SP168-201ENST00000516642 112 ntBASIC0.93□□□□□ -2.26
RPRD1AQ96P16 AL590705.4-201ENST00000532209 134 ntBASIC0.93□□□□□ -2.26
RPRD1AQ96P16 7SK.7-201ENST00000603504 247 ntBASIC0.93□□□□□ -2.26
RPRD1AQ96P16 AC103591.3-201ENST00000608684 209 ntBASIC0.93□□□□□ -2.26
RPRD1AQ96P16 MIR6857-201ENST00000613267 93 ntBASIC0.93□□□□□ -2.26
RPRD1AQ96P16 AC090617.10-201ENST00000624308 134 ntBASIC0.93□□□□□ -2.26
RPRD1AQ96P16 AC068137.4-201ENST00000638485 296 ntBASIC0.93□□□□□ -2.26
RPRD1AQ96P16 RNU6-222P-201ENST00000362438 107 ntBASIC0.92□□□□□ -2.26
RPRD1AQ96P16 RNU6-199P-201ENST00000362954 107 ntBASIC0.92□□□□□ -2.26
RPRD1AQ96P16 RNU1-36P-201ENST00000365130 165 ntBASIC0.92□□□□□ -2.26
RPRD1AQ96P16 RNU6-424P-201ENST00000384367 105 ntBASIC0.92□□□□□ -2.26
RPRD1AQ96P16 MTND3P23-201ENST00000431980 347 ntBASIC0.92□□□□□ -2.26
RPRD1AQ96P16 AC245047.7-201ENST00000440265 293 ntBASIC0.92□□□□□ -2.26
RPRD1AQ96P16 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.92□□□□□ -2.26
RPRD1AQ96P16 AC010598.1-201ENST00000510378 103 ntBASIC0.92□□□□□ -2.26
RPRD1AQ96P16 RNU6-917P-201ENST00000516294 104 ntBASIC0.92□□□□□ -2.26
RPRD1AQ96P16 Y_RNA.683-201ENST00000516508 93 ntBASIC0.92□□□□□ -2.26
RPRD1AQ96P16 RNU6-107P-201ENST00000516643 102 ntBASIC0.92□□□□□ -2.26
RPRD1AQ96P16 MTND2P38-201ENST00000522536 667 ntBASIC0.92□□□□□ -2.26
RPRD1AQ96P16 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.92□□□□□ -2.26
RPRD1AQ96P16 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.92□□□□□ -2.26
RPRD1AQ96P16 AL020996.3-201ENST00000606617 222 ntBASIC0.92□□□□□ -2.26
RPRD1AQ96P16 SNORA28-201ENST00000606769 126 ntBASIC0.92□□□□□ -2.26
RPRD1AQ96P16 RNU6-1059P-201ENST00000363752 98 ntBASIC0.91□□□□□ -2.26
RPRD1AQ96P16 RNU6-595P-201ENST00000363944 107 ntBASIC0.91□□□□□ -2.26
RPRD1AQ96P16 Y_RNA.363-201ENST00000365529 113 ntBASIC0.91□□□□□ -2.26
RPRD1AQ96P16 U8.16-201ENST00000391279 133 ntBASIC0.91□□□□□ -2.26
RPRD1AQ96P16 RNU1-139P-201ENST00000391307 165 ntBASIC0.91□□□□□ -2.26
RPRD1AQ96P16 AL355796.1-201ENST00000406706 323 ntBASIC0.91□□□□□ -2.26
RPRD1AQ96P16 MTCO2P7-201ENST00000446518 666 ntBASIC0.91□□□□□ -2.26
RPRD1AQ96P16 RNU6-1114P-201ENST00000516022 107 ntBASIC0.91□□□□□ -2.26
RPRD1AQ96P16 RNU6-506P-201ENST00000516553 94 ntBASIC0.91□□□□□ -2.26
RPRD1AQ96P16 RNU6-314P-201ENST00000516574 104 ntBASIC0.91□□□□□ -2.26
RPRD1AQ96P16 RNU6-273P-201ENST00000516937 96 ntBASIC0.91□□□□□ -2.26
RPRD1AQ96P16 AC090049.2-201ENST00000550377 109 ntBASIC0.91□□□□□ -2.26
RPRD1AQ96P16 MIR4698-201ENST00000577795 80 ntBASIC0.91□□□□□ -2.26
RPRD1AQ96P16 MIR3973-201ENST00000579824 107 ntBASIC0.91□□□□□ -2.26
RPRD1AQ96P16 MIR4273-201ENST00000582824 84 ntBASIC0.91□□□□□ -2.26
RPRD1AQ96P16 ZNF299P-201ENST00000406845 1804 ntBASIC0.91□□□□□ -2.26
RPRD1AQ96P16 RNU4-75P-201ENST00000364621 146 ntBASIC0.9□□□□□ -2.27
RPRD1AQ96P16 RNU6-596P-201ENST00000365395 98 ntBASIC0.9□□□□□ -2.27
RPRD1AQ96P16 RNU6-281P-201ENST00000384212 103 ntBASIC0.9□□□□□ -2.27
RPRD1AQ96P16 SNORA20B-201ENST00000384220 132 ntBASIC0.9□□□□□ -2.27
RPRD1AQ96P16 MIR520E-201ENST00000384867 87 ntBASIC0.9□□□□□ -2.27
RPRD1AQ96P16 MTCO3P19-201ENST00000415864 321 ntBASIC0.9□□□□□ -2.27
RPRD1AQ96P16 AC063976.4-201ENST00000421971 163 ntBASIC0.9□□□□□ -2.27
RPRD1AQ96P16 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.9□□□□□ -2.27
RPRD1AQ96P16 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.9□□□□□ -2.27
RPRD1AQ96P16 RNU6-864P-201ENST00000516256 108 ntBASIC0.9□□□□□ -2.27
RPRD1AQ96P16 Y_RNA.673-201ENST00000516306 88 ntBASIC0.9□□□□□ -2.27
RPRD1AQ96P16 RNU7-172P-201ENST00000517125 64 ntBASIC0.9□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 277.8 ms