Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.08□□□□□ -2.24
LINC00477Q96M19 AC008269.2-201ENST00000561915 1105 ntBASIC1.08□□□□□ -2.24
LINC00477Q96M19 AC090617.3-201ENST00000573670 475 ntBASIC1.08□□□□□ -2.24
LINC00477Q96M19 AL133255.1-201ENST00000606374 441 ntBASIC1.08□□□□□ -2.24
LINC00477Q96M19 snoZ196.1-201ENST00000625269 89 ntBASIC1.08□□□□□ -2.24
LINC00477Q96M19 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
LINC00477Q96M19 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
LINC00477Q96M19 MTND4P29-201ENST00000503122 1372 ntBASIC1.08□□□□□ -2.24
LINC00477Q96M19 Y_RNA.5-201ENST00000362334 102 ntBASIC1.07□□□□□ -2.24
LINC00477Q96M19 RNU6-1115P-201ENST00000362490 106 ntBASIC1.07□□□□□ -2.24
LINC00477Q96M19 snoU2-30.2-201ENST00000362805 70 ntBASIC1.07□□□□□ -2.24
LINC00477Q96M19 Y_RNA.124-201ENST00000363339 93 ntBASIC1.07□□□□□ -2.24
LINC00477Q96M19 RNU6-137P-201ENST00000363680 108 ntBASIC1.07□□□□□ -2.24
LINC00477Q96M19 RNU6-879P-201ENST00000364328 108 ntBASIC1.07□□□□□ -2.24
LINC00477Q96M19 SNORA63D-201ENST00000364359 132 ntBASIC1.07□□□□□ -2.24
LINC00477Q96M19 RNU6-926P-201ENST00000384075 107 ntBASIC1.07□□□□□ -2.24
LINC00477Q96M19 Y_RNA.463-201ENST00000384271 102 ntBASIC1.07□□□□□ -2.24
LINC00477Q96M19 RNU6-1297P-201ENST00000384415 104 ntBASIC1.07□□□□□ -2.24
LINC00477Q96M19 Y_RNA.509-201ENST00000384506 99 ntBASIC1.07□□□□□ -2.24
LINC00477Q96M19 Y_RNA.579-201ENST00000390939 94 ntBASIC1.07□□□□□ -2.24
LINC00477Q96M19 SNORA67.5-201ENST00000391036 107 ntBASIC1.07□□□□□ -2.24
LINC00477Q96M19 Y_RNA.592-201ENST00000410274 109 ntBASIC1.07□□□□□ -2.24
LINC00477Q96M19 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.07□□□□□ -2.24
LINC00477Q96M19 AL354695.1-201ENST00000427935 228 ntBASIC1.07□□□□□ -2.24
LINC00477Q96M19 RNU7-152P-201ENST00000458982 64 ntBASIC1.07□□□□□ -2.24
LINC00477Q96M19 RPL26P26-201ENST00000480251 434 ntBASIC1.07□□□□□ -2.24
LINC00477Q96M19 AC010469.2-201ENST00000496412 480 ntBASIC1.07□□□□□ -2.24
LINC00477Q96M19 SNORA31.10-201ENST00000516482 106 ntBASIC1.07□□□□□ -2.24
LINC00477Q96M19 SUMO2P18-201ENST00000518873 252 ntBASIC1.07□□□□□ -2.24
LINC00477Q96M19 AC022217.4-201ENST00000604389 163 ntBASIC1.07□□□□□ -2.24
LINC00477Q96M19 LARP7P1-201ENST00000605576 316 ntBASIC1.07□□□□□ -2.24
LINC00477Q96M19 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.07□□□□□ -2.24
LINC00477Q96M19 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.07□□□□□ -2.24
LINC00477Q96M19 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
LINC00477Q96M19 RNU4-79P-201ENST00000362764 141 ntBASIC1.06□□□□□ -2.24
LINC00477Q96M19 RNU6-60P-201ENST00000364792 103 ntBASIC1.06□□□□□ -2.24
LINC00477Q96M19 Y_RNA.387-201ENST00000383918 102 ntBASIC1.06□□□□□ -2.24
LINC00477Q96M19 RNU6-308P-201ENST00000390957 107 ntBASIC1.06□□□□□ -2.24
LINC00477Q96M19 RNU6-700P-201ENST00000391043 107 ntBASIC1.06□□□□□ -2.24
LINC00477Q96M19 NCOR1P3-201ENST00000420479 303 ntBASIC1.06□□□□□ -2.24
LINC00477Q96M19 MTCYBP10-201ENST00000424905 650 ntBASIC1.06□□□□□ -2.24
LINC00477Q96M19 AC010154.1-201ENST00000425857 269 ntBASIC1.06□□□□□ -2.24
LINC00477Q96M19 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.06□□□□□ -2.24
LINC00477Q96M19 AC073910.1-201ENST00000445047 438 ntBASIC1.06□□□□□ -2.24
LINC00477Q96M19 Y_RNA.653-201ENST00000459091 95 ntBASIC1.06□□□□□ -2.24
LINC00477Q96M19 SNORD65B-201ENST00000459126 73 ntBASIC1.06□□□□□ -2.24
LINC00477Q96M19 snoU13.26-201ENST00000459452 105 ntBASIC1.06□□□□□ -2.24
LINC00477Q96M19 AC010655.3-201ENST00000478818 450 ntBASIC1.06□□□□□ -2.24
LINC00477Q96M19 RNU6-948P-201ENST00000516374 107 ntBASIC1.06□□□□□ -2.24
LINC00477Q96M19 Y_RNA.683-201ENST00000516508 93 ntBASIC1.06□□□□□ -2.24
LINC00477Q96M19 AC023157.2-201ENST00000540596 141 ntBASIC1.06□□□□□ -2.24
LINC00477Q96M19 AL645939.4-201ENST00000604495 135 ntBASIC1.06□□□□□ -2.24
LINC00477Q96M19 RPL17P51-201ENST00000605218 238 ntBASIC1.06□□□□□ -2.24
LINC00477Q96M19 SNORD58B-201ENST00000607313 66 ntBASIC1.06□□□□□ -2.24
LINC00477Q96M19 AL353149.1-201ENST00000610667 244 ntBASIC1.06□□□□□ -2.24
LINC00477Q96M19 AC091925.1-201ENST00000623204 462 ntBASIC1.06□□□□□ -2.24
LINC00477Q96M19 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.06□□□□□ -2.24
LINC00477Q96M19 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
LINC00477Q96M19 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
LINC00477Q96M19 Y_RNA.31-201ENST00000362574 102 ntBASIC1.05□□□□□ -2.24
LINC00477Q96M19 Y_RNA.101-201ENST00000363154 102 ntBASIC1.05□□□□□ -2.24
LINC00477Q96M19 Y_RNA.172-201ENST00000363765 102 ntBASIC1.05□□□□□ -2.24
LINC00477Q96M19 RNU6-1040P-201ENST00000383974 107 ntBASIC1.05□□□□□ -2.24
LINC00477Q96M19 RNU6-939P-201ENST00000384634 107 ntBASIC1.05□□□□□ -2.24
LINC00477Q96M19 RNU6-1009P-201ENST00000390996 107 ntBASIC1.05□□□□□ -2.24
LINC00477Q96M19 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.05□□□□□ -2.24
LINC00477Q96M19 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.05□□□□□ -2.24
LINC00477Q96M19 snoU13.15-201ENST00000459407 104 ntBASIC1.05□□□□□ -2.24
LINC00477Q96M19 AL163195.1-201ENST00000496941 348 ntBASIC1.05□□□□□ -2.24
LINC00477Q96M19 MTND3P22-201ENST00000510932 243 ntBASIC1.05□□□□□ -2.24
LINC00477Q96M19 SNORA40.9-201ENST00000515895 93 ntBASIC1.05□□□□□ -2.24
LINC00477Q96M19 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.05□□□□□ -2.24
LINC00477Q96M19 RNA5SP61-201ENST00000516453 100 ntBASIC1.05□□□□□ -2.24
LINC00477Q96M19 RNU6-107P-201ENST00000516643 102 ntBASIC1.05□□□□□ -2.24
LINC00477Q96M19 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.05□□□□□ -2.24
LINC00477Q96M19 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.05□□□□□ -2.24
LINC00477Q96M19 AC018448.1-201ENST00000552843 316 ntBASIC1.05□□□□□ -2.24
LINC00477Q96M19 SNORA77B-201ENST00000578179 125 ntBASIC1.05□□□□□ -2.24
LINC00477Q96M19 C8orf59P2-201ENST00000603441 271 ntBASIC1.05□□□□□ -2.24
LINC00477Q96M19 7SK.7-201ENST00000603504 247 ntBASIC1.05□□□□□ -2.24
LINC00477Q96M19 AP001485.1-201ENST00000604799 199 ntBASIC1.05□□□□□ -2.24
LINC00477Q96M19 MIR7974-201ENST00000615835 79 ntBASIC1.05□□□□□ -2.24
LINC00477Q96M19 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.05□□□□□ -2.24
LINC00477Q96M19 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.05□□□□□ -2.24
LINC00477Q96M19 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.05□□□□□ -2.24
LINC00477Q96M19 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
LINC00477Q96M19 AC010615.1-201ENST00000594254 1764 ntBASIC1.04□□□□□ -2.24
LINC00477Q96M19 U3.8-201ENST00000363675 217 ntBASIC1.04□□□□□ -2.24
LINC00477Q96M19 SNORA20B-201ENST00000384220 132 ntBASIC1.04□□□□□ -2.24
LINC00477Q96M19 Y_RNA.577-201ENST00000384794 101 ntBASIC1.04□□□□□ -2.24
LINC00477Q96M19 MIR758-201ENST00000390227 88 ntBASIC1.04□□□□□ -2.24
LINC00477Q96M19 SNORD12B-201ENST00000410433 91 ntBASIC1.04□□□□□ -2.24
LINC00477Q96M19 MTND4LP11-201ENST00000422184 280 ntBASIC1.04□□□□□ -2.24
LINC00477Q96M19 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.04□□□□□ -2.24
LINC00477Q96M19 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC1.04□□□□□ -2.24
LINC00477Q96M19 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.04□□□□□ -2.24
LINC00477Q96M19 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.04□□□□□ -2.24
LINC00477Q96M19 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.04□□□□□ -2.24
LINC00477Q96M19 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.04□□□□□ -2.24
LINC00477Q96M19 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms