Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 SCARNA15-202ENST00000516881 127 ntBASIC4.13□□□□□ -1.75
TRIM47Q96LD4 POC1B-211ENST00000549504 581 ntTSL 5 BASIC4.13□□□□□ -1.75
TRIM47Q96LD4 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC4.13□□□□□ -1.75
TRIM47Q96LD4 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.13□□□□□ -1.75
TRIM47Q96LD4 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.13□□□□□ -1.75
TRIM47Q96LD4 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.13□□□□□ -1.75
TRIM47Q96LD4 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
TRIM47Q96LD4 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
TRIM47Q96LD4 CEP170P1-201ENST00000502249 4587 ntBASIC4.12□□□□□ -1.75
TRIM47Q96LD4 SNORA31-201ENST00000362607 130 ntBASIC4.12□□□□□ -1.75
TRIM47Q96LD4 RNA5SP374-201ENST00000362939 125 ntBASIC4.12□□□□□ -1.75
TRIM47Q96LD4 RNU4-13P-201ENST00000364019 141 ntBASIC4.12□□□□□ -1.75
TRIM47Q96LD4 RNU6-1305P-201ENST00000364353 104 ntBASIC4.12□□□□□ -1.75
TRIM47Q96LD4 RNU6-219P-201ENST00000364728 107 ntBASIC4.12□□□□□ -1.75
TRIM47Q96LD4 MIR562-201ENST00000384894 95 ntBASIC4.12□□□□□ -1.75
TRIM47Q96LD4 AC245291.1-201ENST00000419501 328 ntBASIC4.12□□□□□ -1.75
TRIM47Q96LD4 HMGN2P20-201ENST00000437531 273 ntBASIC4.12□□□□□ -1.75
TRIM47Q96LD4 RN7SL504P-201ENST00000494496 287 ntBASIC4.12□□□□□ -1.75
TRIM47Q96LD4 RNU6-795P-201ENST00000516323 103 ntBASIC4.12□□□□□ -1.75
TRIM47Q96LD4 AP004371.1-201ENST00000525240 214 ntBASIC4.12□□□□□ -1.75
TRIM47Q96LD4 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC4.12□□□□□ -1.75
TRIM47Q96LD4 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.12□□□□□ -1.75
TRIM47Q96LD4 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TRIM47Q96LD4 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.12□□□□□ -1.75
TRIM47Q96LD4 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TRIM47Q96LD4 AL365361.1-201ENST00000566942 3481 ntBASIC4.11□□□□□ -1.75
TRIM47Q96LD4 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TRIM47Q96LD4 RNU1-72P-201ENST00000362976 153 ntBASIC4.11□□□□□ -1.75
TRIM47Q96LD4 RNU6-1099P-201ENST00000363533 107 ntBASIC4.11□□□□□ -1.75
TRIM47Q96LD4 RNU6-884P-201ENST00000363889 107 ntBASIC4.11□□□□□ -1.75
TRIM47Q96LD4 RNA5SP189-201ENST00000364920 115 ntBASIC4.11□□□□□ -1.75
TRIM47Q96LD4 RNU6-652P-201ENST00000365488 107 ntBASIC4.11□□□□□ -1.75
TRIM47Q96LD4 RNU6-217P-201ENST00000384164 104 ntBASIC4.11□□□□□ -1.75
TRIM47Q96LD4 MIR1183-201ENST00000408856 89 ntBASIC4.11□□□□□ -1.75
TRIM47Q96LD4 MIR1912-201ENST00000410389 80 ntBASIC4.11□□□□□ -1.75
TRIM47Q96LD4 AC004941.2-201ENST00000427009 228 ntBASIC4.11□□□□□ -1.75
TRIM47Q96LD4 RPS26P48-201ENST00000491713 339 ntBASIC4.11□□□□□ -1.75
TRIM47Q96LD4 AC012531.4-201ENST00000616509 177 ntBASIC4.11□□□□□ -1.75
TRIM47Q96LD4 U4atac.1-201ENST00000618345 95 ntBASIC4.11□□□□□ -1.75
TRIM47Q96LD4 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TRIM47Q96LD4 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
TRIM47Q96LD4 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
TRIM47Q96LD4 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TRIM47Q96LD4 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TRIM47Q96LD4 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TRIM47Q96LD4 Y_RNA.10-201ENST00000362371 110 ntBASIC4.1□□□□□ -1.75
TRIM47Q96LD4 Y_RNA.796-201ENST00000364268 102 ntBASIC4.1□□□□□ -1.75
TRIM47Q96LD4 RNU6-335P-201ENST00000364563 113 ntBASIC4.1□□□□□ -1.75
TRIM47Q96LD4 Y_RNA.799-201ENST00000364992 102 ntBASIC4.1□□□□□ -1.75
TRIM47Q96LD4 RNA5SP511-201ENST00000410487 115 ntBASIC4.1□□□□□ -1.75
TRIM47Q96LD4 RNU6-938P-201ENST00000411285 103 ntBASIC4.1□□□□□ -1.75
TRIM47Q96LD4 COTL1P1-201ENST00000422309 375 ntBASIC4.1□□□□□ -1.75
TRIM47Q96LD4 AC010285.1-201ENST00000470580 392 ntBASIC4.1□□□□□ -1.75
TRIM47Q96LD4 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC4.1□□□□□ -1.75
TRIM47Q96LD4 AC110741.2-201ENST00000605278 268 ntBASIC4.1□□□□□ -1.75
TRIM47Q96LD4 uc_338.32-201ENST00000615087 172 ntBASIC4.1□□□□□ -1.75
TRIM47Q96LD4 FAS-AS1.2-201ENST00000620386 170 ntBASIC4.1□□□□□ -1.75
TRIM47Q96LD4 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TRIM47Q96LD4 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC4.1□□□□□ -1.75
TRIM47Q96LD4 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
TRIM47Q96LD4 AL035425.3-201ENST00000564206 4996 ntBASIC4.1□□□□□ -1.75
TRIM47Q96LD4 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.1□□□□□ -1.75
TRIM47Q96LD4 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
TRIM47Q96LD4 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
TRIM47Q96LD4 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.09□□□□□ -1.75
TRIM47Q96LD4 RNU4-15P-201ENST00000362613 141 ntBASIC4.09□□□□□ -1.75
TRIM47Q96LD4 RNU6-1209P-201ENST00000363655 107 ntBASIC4.09□□□□□ -1.75
TRIM47Q96LD4 SNORA7.2-201ENST00000364446 145 ntBASIC4.09□□□□□ -1.75
TRIM47Q96LD4 MIR181A2-201ENST00000384863 110 ntBASIC4.09□□□□□ -1.75
TRIM47Q96LD4 AC096949.1-201ENST00000412047 152 ntBASIC4.09□□□□□ -1.75
TRIM47Q96LD4 BTF3P4-201ENST00000418852 495 ntBASIC4.09□□□□□ -1.75
TRIM47Q96LD4 U3.44-201ENST00000458938 192 ntBASIC4.09□□□□□ -1.75
TRIM47Q96LD4 SNRPGP3-201ENST00000469405 227 ntBASIC4.09□□□□□ -1.75
TRIM47Q96LD4 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC4.09□□□□□ -1.75
TRIM47Q96LD4 ACA59.2-201ENST00000517061 156 ntBASIC4.09□□□□□ -1.75
TRIM47Q96LD4 SUMO2P16-201ENST00000519475 264 ntBASIC4.09□□□□□ -1.75
TRIM47Q96LD4 AC109329.2-201ENST00000519658 482 ntBASIC4.09□□□□□ -1.75
TRIM47Q96LD4 MIR4644-201ENST00000579929 84 ntBASIC4.09□□□□□ -1.75
TRIM47Q96LD4 SNRPGP15-201ENST00000600149 222 ntBASIC4.09□□□□□ -1.75
TRIM47Q96LD4 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.76
TRIM47Q96LD4 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC4.09□□□□□ -1.76
TRIM47Q96LD4 FAM35CP-201ENST00000554755 2470 ntBASIC4.09□□□□□ -1.76
TRIM47Q96LD4 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
TRIM47Q96LD4 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
TRIM47Q96LD4 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC4.08□□□□□ -1.76
TRIM47Q96LD4 RNU6-170P-201ENST00000362832 104 ntBASIC4.08□□□□□ -1.76
TRIM47Q96LD4 RNU6-283P-201ENST00000364788 107 ntBASIC4.08□□□□□ -1.76
TRIM47Q96LD4 SNORD115-35-201ENST00000365122 82 ntBASIC4.08□□□□□ -1.76
TRIM47Q96LD4 RNU6-690P-201ENST00000365242 106 ntBASIC4.08□□□□□ -1.76
TRIM47Q96LD4 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
TRIM47Q96LD4 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
TRIM47Q96LD4 MIR586-201ENST00000385035 97 ntBASIC4.08□□□□□ -1.76
TRIM47Q96LD4 AL138878.1-201ENST00000405131 347 ntBASIC4.08□□□□□ -1.76
TRIM47Q96LD4 AC245102.2-201ENST00000448956 180 ntBASIC4.08□□□□□ -1.76
TRIM47Q96LD4 S100A11P2-201ENST00000467589 312 ntBASIC4.08□□□□□ -1.76
TRIM47Q96LD4 RPS27AP10-201ENST00000496103 208 ntBASIC4.08□□□□□ -1.76
TRIM47Q96LD4 RNU6-1270P-201ENST00000517128 108 ntBASIC4.08□□□□□ -1.76
TRIM47Q96LD4 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC4.08□□□□□ -1.76
TRIM47Q96LD4 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
TRIM47Q96LD4 MIR5680-201ENST00000577577 84 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms