Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 SNORD27.1-201ENST00000516319 72 ntBASIC0.07□□□□□ -2.4
ALPK3Q96L96 IGLVI-20-201ENST00000519296 130 ntBASIC0.07□□□□□ -2.4
ALPK3Q96L96 AC027419.1-201ENST00000522976 328 ntBASIC0.07□□□□□ -2.4
ALPK3Q96L96 AP003461.1-201ENST00000528866 78 ntBASIC0.07□□□□□ -2.4
ALPK3Q96L96 MTCO3P23-201ENST00000561363 289 ntBASIC0.07□□□□□ -2.4
ALPK3Q96L96 AC092354.1-201ENST00000606057 376 ntBASIC0.07□□□□□ -2.4
ALPK3Q96L96 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.07□□□□□ -2.4
ALPK3Q96L96 AC006435.5-201ENST00000624486 112 ntBASIC0.07□□□□□ -2.4
ALPK3Q96L96 SNORA25.3-201ENST00000363205 127 ntBASIC0.07□□□□□ -2.4
ALPK3Q96L96 RNU6-82P-201ENST00000363970 107 ntBASIC0.07□□□□□ -2.4
ALPK3Q96L96 RNU4-66P-201ENST00000365199 138 ntBASIC0.07□□□□□ -2.4
ALPK3Q96L96 Y_RNA.336-201ENST00000365307 109 ntBASIC0.07□□□□□ -2.4
ALPK3Q96L96 RNU5E-5P-201ENST00000365379 116 ntBASIC0.07□□□□□ -2.4
ALPK3Q96L96 GMFBP1-201ENST00000467831 427 ntBASIC0.07□□□□□ -2.4
ALPK3Q96L96 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC0.07□□□□□ -2.4
ALPK3Q96L96 AC104576.1-201ENST00000524225 88 ntBASIC0.07□□□□□ -2.4
ALPK3Q96L96 AL157687.1-201ENST00000554853 619 ntBASIC0.07□□□□□ -2.4
ALPK3Q96L96 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC0.07□□□□□ -2.4
ALPK3Q96L96 MIR3682-201ENST00000581338 84 ntBASIC0.07□□□□□ -2.4
ALPK3Q96L96 AC087683.1-201ENST00000591187 441 ntBASIC0.07□□□□□ -2.4
ALPK3Q96L96 AP000811.1-201ENST00000603803 651 ntBASIC0.07□□□□□ -2.4
ALPK3Q96L96 AC018645.2-201ENST00000609151 472 ntBASIC0.07□□□□□ -2.4
ALPK3Q96L96 AC064836.2-201ENST00000609491 462 ntBASIC0.07□□□□□ -2.4
ALPK3Q96L96 AL078596.1-201ENST00000624856 447 ntBASIC0.07□□□□□ -2.4
ALPK3Q96L96 SNORA9.1-201ENST00000362412 131 ntBASIC0.06□□□□□ -2.4
ALPK3Q96L96 SNORD114-16-201ENST00000363044 70 ntBASIC0.06□□□□□ -2.4
ALPK3Q96L96 RNA5SP264-201ENST00000363115 107 ntBASIC0.06□□□□□ -2.4
ALPK3Q96L96 RNY4P34-201ENST00000364779 95 ntBASIC0.06□□□□□ -2.4
ALPK3Q96L96 SNORA8.3-201ENST00000384679 139 ntBASIC0.06□□□□□ -2.4
ALPK3Q96L96 SNORD41-201ENST00000386967 70 ntBASIC0.06□□□□□ -2.4
ALPK3Q96L96 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC0.06□□□□□ -2.4
ALPK3Q96L96 USP9YP29-201ENST00000445112 563 ntBASIC0.06□□□□□ -2.4
ALPK3Q96L96 TPT1P7-201ENST00000458300 517 ntBASIC0.06□□□□□ -2.4
ALPK3Q96L96 UBE2V1P12-201ENST00000503954 474 ntBASIC0.06□□□□□ -2.4
ALPK3Q96L96 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC0.06□□□□□ -2.4
ALPK3Q96L96 SCARNA24.1-201ENST00000516465 137 ntBASIC0.06□□□□□ -2.4
ALPK3Q96L96 RNU7-128P-201ENST00000517247 62 ntBASIC0.06□□□□□ -2.4
ALPK3Q96L96 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.06□□□□□ -2.4
ALPK3Q96L96 AC026470.2-201ENST00000561492 181 ntBASIC0.06□□□□□ -2.4
ALPK3Q96L96 MIR4764-201ENST00000580680 88 ntBASIC0.06□□□□□ -2.4
ALPK3Q96L96 RNU6-85P-201ENST00000605989 107 ntBASIC0.06□□□□□ -2.4
ALPK3Q96L96 SNORD11B-201ENST00000607707 90 ntBASIC0.06□□□□□ -2.4
ALPK3Q96L96 AC006566.1-201ENST00000608943 513 ntBASIC0.06□□□□□ -2.4
ALPK3Q96L96 AL133215.3-201ENST00000609801 448 ntBASIC0.06□□□□□ -2.4
ALPK3Q96L96 AL355073.2-201ENST00000612106 557 ntBASIC0.06□□□□□ -2.4
ALPK3Q96L96 AC005562.2-201ENST00000618264 111 ntBASIC0.06□□□□□ -2.4
ALPK3Q96L96 MTND5P16-201ENST00000460269 1703 ntBASIC0.06□□□□□ -2.4
ALPK3Q96L96 SNORA1B-201ENST00000362535 133 ntBASIC0.05□□□□□ -2.4
ALPK3Q96L96 RNA5SP214-201ENST00000363378 118 ntBASIC0.05□□□□□ -2.4
ALPK3Q96L96 Y_RNA.170-201ENST00000363746 110 ntBASIC0.05□□□□□ -2.4
ALPK3Q96L96 RNU6-1303P-201ENST00000364841 107 ntBASIC0.05□□□□□ -2.4
ALPK3Q96L96 MIR520C-201ENST00000385005 87 ntBASIC0.05□□□□□ -2.4
ALPK3Q96L96 MIR140-201ENST00000385282 100 ntBASIC0.05□□□□□ -2.4
ALPK3Q96L96 RNU2-29P-201ENST00000410423 189 ntBASIC0.05□□□□□ -2.4
ALPK3Q96L96 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.05□□□□□ -2.4
ALPK3Q96L96 AL009048.1-201ENST00000450437 298 ntBASIC0.05□□□□□ -2.4
ALPK3Q96L96 MTCO3P38-201ENST00000468910 766 ntBASIC0.05□□□□□ -2.4
ALPK3Q96L96 AC108740.1-201ENST00000498629 225 ntBASIC0.05□□□□□ -2.4
ALPK3Q96L96 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.05□□□□□ -2.4
ALPK3Q96L96 RNU6-1278P-201ENST00000516130 107 ntBASIC0.05□□□□□ -2.4
ALPK3Q96L96 AC104383.1-201ENST00000530297 370 ntBASIC0.05□□□□□ -2.4
ALPK3Q96L96 AC245014.2-201ENST00000603689 287 ntBASIC0.05□□□□□ -2.4
ALPK3Q96L96 AC025449.1-201ENST00000603896 529 ntBASIC0.05□□□□□ -2.4
ALPK3Q96L96 AC246785.4-201ENST00000605374 287 ntBASIC0.05□□□□□ -2.4
ALPK3Q96L96 AL096861.1-201ENST00000610899 123 ntBASIC0.05□□□□□ -2.4
ALPK3Q96L96 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC0.05□□□□□ -2.4
ALPK3Q96L96 RNU4-45P-201ENST00000365469 141 ntBASIC0.05□□□□□ -2.4
ALPK3Q96L96 Y_RNA.399-201ENST00000383955 105 ntBASIC0.05□□□□□ -2.4
ALPK3Q96L96 RNY1P8-201ENST00000383970 114 ntBASIC0.05□□□□□ -2.4
ALPK3Q96L96 RNU6-933P-201ENST00000384424 107 ntBASIC0.05□□□□□ -2.4
ALPK3Q96L96 RNU6-125P-201ENST00000384505 107 ntBASIC0.05□□□□□ -2.4
ALPK3Q96L96 AL008987.1-201ENST00000415528 237 ntBASIC0.05□□□□□ -2.4
ALPK3Q96L96 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC0.05□□□□□ -2.4
ALPK3Q96L96 PCNPP5-201ENST00000452246 481 ntBASIC0.05□□□□□ -2.4
ALPK3Q96L96 MTCO3P10-201ENST00000455912 772 ntBASIC0.05□□□□□ -2.4
ALPK3Q96L96 RPL23AP54-201ENST00000495129 419 ntBASIC0.05□□□□□ -2.4
ALPK3Q96L96 RNU4-49P-201ENST00000516080 140 ntBASIC0.05□□□□□ -2.4
ALPK3Q96L96 SNORA25.12-201ENST00000516202 82 ntBASIC0.05□□□□□ -2.4
ALPK3Q96L96 SNORA25.14-201ENST00000516481 132 ntBASIC0.05□□□□□ -2.4
ALPK3Q96L96 RNU7-28P-201ENST00000516759 62 ntBASIC0.05□□□□□ -2.4
ALPK3Q96L96 RNU2-46P-201ENST00000517038 113 ntBASIC0.05□□□□□ -2.4
ALPK3Q96L96 HULC.1-201ENST00000612720 240 ntBASIC0.05□□□□□ -2.4
ALPK3Q96L96 AC073349.3-201ENST00000617616 186 ntBASIC0.05□□□□□ -2.4
ALPK3Q96L96 AP002371.2-201ENST00000624450 503 ntBASIC0.05□□□□□ -2.4
ALPK3Q96L96 AC007671.2-201ENST00000637344 619 ntBASIC0.05□□□□□ -2.4
ALPK3Q96L96 MTND4P9-201ENST00000507819 1346 ntBASIC0.04□□□□□ -2.4
ALPK3Q96L96 AP000568.1-201ENST00000282964 442 ntBASIC0.04□□□□□ -2.4
ALPK3Q96L96 MIR409-201ENST00000362237 79 ntBASIC0.04□□□□□ -2.4
ALPK3Q96L96 RNU6-873P-201ENST00000363833 107 ntBASIC0.04□□□□□ -2.4
ALPK3Q96L96 RNU6-74P-201ENST00000384235 107 ntBASIC0.04□□□□□ -2.4
ALPK3Q96L96 RNU6-1297P-201ENST00000384415 104 ntBASIC0.04□□□□□ -2.4
ALPK3Q96L96 RNU6-456P-201ENST00000384493 107 ntBASIC0.04□□□□□ -2.4
ALPK3Q96L96 RNU6-606P-201ENST00000384721 111 ntBASIC0.04□□□□□ -2.4
ALPK3Q96L96 RNA5SP494-201ENST00000410653 129 ntBASIC0.04□□□□□ -2.4
ALPK3Q96L96 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC0.04□□□□□ -2.4
ALPK3Q96L96 PIGPP3-201ENST00000425307 415 ntBASIC0.04□□□□□ -2.4
ALPK3Q96L96 RNU6-430P-201ENST00000517078 107 ntBASIC0.04□□□□□ -2.4
ALPK3Q96L96 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC0.04□□□□□ -2.4
ALPK3Q96L96 AC023157.2-201ENST00000540596 141 ntBASIC0.04□□□□□ -2.4
ALPK3Q96L96 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC0.04□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms