Protein–RNA interactions for Protein: Q96KN7

RPGRIP1, X-linked retinitis pigmentosa GTPase regulator-interacting protein 1, humanhuman

Predictions only

Length 1,286 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1Q96KN7 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.47□□□□□ -2.17
RPGRIP1Q96KN7 RPS29P1-201ENST00000465274 159 ntBASIC1.47□□□□□ -2.17
RPGRIP1Q96KN7 RNU6-1114P-201ENST00000516022 107 ntBASIC1.47□□□□□ -2.17
RPGRIP1Q96KN7 RNA5SP481-201ENST00000516814 122 ntBASIC1.47□□□□□ -2.17
RPGRIP1Q96KN7 RNU7-30P-201ENST00000516835 62 ntBASIC1.47□□□□□ -2.17
RPGRIP1Q96KN7 Y_RNA.708-201ENST00000516950 96 ntBASIC1.47□□□□□ -2.17
RPGRIP1Q96KN7 AC008269.2-201ENST00000561915 1105 ntBASIC1.47□□□□□ -2.17
RPGRIP1Q96KN7 AC080078.3-201ENST00000605407 463 ntBASIC1.47□□□□□ -2.17
RPGRIP1Q96KN7 AC095038.3-201ENST00000634439 195 ntBASIC1.47□□□□□ -2.17
RPGRIP1Q96KN7 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
RPGRIP1Q96KN7 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
RPGRIP1Q96KN7 Y_RNA.88-201ENST00000363029 99 ntBASIC1.46□□□□□ -2.18
RPGRIP1Q96KN7 RNU6-271P-201ENST00000363858 105 ntBASIC1.46□□□□□ -2.18
RPGRIP1Q96KN7 SNORA4.2-201ENST00000365313 147 ntBASIC1.46□□□□□ -2.18
RPGRIP1Q96KN7 RNU6-767P-201ENST00000384132 107 ntBASIC1.46□□□□□ -2.18
RPGRIP1Q96KN7 RNU6-281P-201ENST00000384212 103 ntBASIC1.46□□□□□ -2.18
RPGRIP1Q96KN7 MIR515-2-201ENST00000384883 83 ntBASIC1.46□□□□□ -2.18
RPGRIP1Q96KN7 MIR515-1-201ENST00000384884 83 ntBASIC1.46□□□□□ -2.18
RPGRIP1Q96KN7 RPL37P10-201ENST00000412884 288 ntBASIC1.46□□□□□ -2.18
RPGRIP1Q96KN7 JTBP1-201ENST00000441314 247 ntBASIC1.46□□□□□ -2.18
RPGRIP1Q96KN7 MTND3P10-201ENST00000450967 341 ntBASIC1.46□□□□□ -2.18
RPGRIP1Q96KN7 RPL7P42-201ENST00000481005 679 ntBASIC1.46□□□□□ -2.18
RPGRIP1Q96KN7 AC046134.1-201ENST00000514454 666 ntBASIC1.46□□□□□ -2.18
RPGRIP1Q96KN7 AC009229.3-201ENST00000608056 282 ntBASIC1.46□□□□□ -2.18
RPGRIP1Q96KN7 AC010999.1-201ENST00000611856 324 ntBASIC1.46□□□□□ -2.18
RPGRIP1Q96KN7 PVT1_3.1-201ENST00000620853 95 ntBASIC1.46□□□□□ -2.18
RPGRIP1Q96KN7 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
RPGRIP1Q96KN7 AC100821.1-201ENST00000523153 2479 ntBASIC1.46□□□□□ -2.18
RPGRIP1Q96KN7 MTND5P16-201ENST00000460269 1703 ntBASIC1.46□□□□□ -2.18
RPGRIP1Q96KN7 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
RPGRIP1Q96KN7 Y_RNA.36-201ENST00000362602 112 ntBASIC1.45□□□□□ -2.18
RPGRIP1Q96KN7 Y_RNA.160-201ENST00000363677 92 ntBASIC1.45□□□□□ -2.18
RPGRIP1Q96KN7 Y_RNA.279-201ENST00000364763 95 ntBASIC1.45□□□□□ -2.18
RPGRIP1Q96KN7 MIR150-201ENST00000385048 84 ntBASIC1.45□□□□□ -2.18
RPGRIP1Q96KN7 AL353997.1-201ENST00000432936 108 ntBASIC1.45□□□□□ -2.18
RPGRIP1Q96KN7 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.45□□□□□ -2.18
RPGRIP1Q96KN7 snoU13.27-201ENST00000459278 104 ntBASIC1.45□□□□□ -2.18
RPGRIP1Q96KN7 COX6CP14-201ENST00000469580 174 ntBASIC1.45□□□□□ -2.18
RPGRIP1Q96KN7 AC103851.1-201ENST00000506833 274 ntBASIC1.45□□□□□ -2.18
RPGRIP1Q96KN7 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.45□□□□□ -2.18
RPGRIP1Q96KN7 FAM106DP-201ENST00000586416 501 ntBASIC1.45□□□□□ -2.18
RPGRIP1Q96KN7 PRR13P7-201ENST00000605538 430 ntBASIC1.45□□□□□ -2.18
RPGRIP1Q96KN7 MIR8063-201ENST00000621930 81 ntBASIC1.45□□□□□ -2.18
RPGRIP1Q96KN7 RNU1-93P-201ENST00000364704 169 ntBASIC1.44□□□□□ -2.18
RPGRIP1Q96KN7 Y_RNA.354-201ENST00000365448 111 ntBASIC1.44□□□□□ -2.18
RPGRIP1Q96KN7 Y_RNA.404-201ENST00000383978 102 ntBASIC1.44□□□□□ -2.18
RPGRIP1Q96KN7 Y_RNA.482-201ENST00000384377 111 ntBASIC1.44□□□□□ -2.18
RPGRIP1Q96KN7 RNA5SP323-201ENST00000391094 133 ntBASIC1.44□□□□□ -2.18
RPGRIP1Q96KN7 MIR190B-201ENST00000401119 79 ntBASIC1.44□□□□□ -2.18
RPGRIP1Q96KN7 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.44□□□□□ -2.18
RPGRIP1Q96KN7 MTND1P2-201ENST00000430604 821 ntBASIC1.44□□□□□ -2.18
RPGRIP1Q96KN7 FTH1P12-201ENST00000432137 551 ntBASIC1.44□□□□□ -2.18
RPGRIP1Q96KN7 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.44□□□□□ -2.18
RPGRIP1Q96KN7 AL163195.1-201ENST00000496941 348 ntBASIC1.44□□□□□ -2.18
RPGRIP1Q96KN7 Y_RNA.683-201ENST00000516508 93 ntBASIC1.44□□□□□ -2.18
RPGRIP1Q96KN7 AC091144.1-201ENST00000519573 138 ntBASIC1.44□□□□□ -2.18
RPGRIP1Q96KN7 AC105029.1-201ENST00000520250 669 ntBASIC1.44□□□□□ -2.18
RPGRIP1Q96KN7 AC024995.1-201ENST00000523014 93 ntBASIC1.44□□□□□ -2.18
RPGRIP1Q96KN7 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.44□□□□□ -2.18
RPGRIP1Q96KN7 AC093023.1-201ENST00000547375 507 ntBASIC1.44□□□□□ -2.18
RPGRIP1Q96KN7 AL121579.1-201ENST00000555129 305 ntBASIC1.44□□□□□ -2.18
RPGRIP1Q96KN7 FRG2DP-202ENST00000566967 323 ntBASIC1.44□□□□□ -2.18
RPGRIP1Q96KN7 AC005668.1-201ENST00000571142 476 ntBASIC1.44□□□□□ -2.18
RPGRIP1Q96KN7 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
RPGRIP1Q96KN7 U6.108-201ENST00000637764 58 ntBASIC1.44□□□□□ -2.18
RPGRIP1Q96KN7 AC091812.1-201ENST00000432235 1948 ntBASIC1.44□□□□□ -2.18
RPGRIP1Q96KN7 ICE2P2-201ENST00000483823 2787 ntBASIC1.43□□□□□ -2.18
RPGRIP1Q96KN7 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.43□□□□□ -2.18
RPGRIP1Q96KN7 RNU6-874P-201ENST00000362390 105 ntBASIC1.43□□□□□ -2.18
RPGRIP1Q96KN7 RNU6-845P-201ENST00000362578 103 ntBASIC1.43□□□□□ -2.18
RPGRIP1Q96KN7 RNY1P16-201ENST00000363063 111 ntBASIC1.43□□□□□ -2.18
RPGRIP1Q96KN7 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.43□□□□□ -2.18
RPGRIP1Q96KN7 RNU6-203P-201ENST00000384038 104 ntBASIC1.43□□□□□ -2.18
RPGRIP1Q96KN7 RNU6-331P-201ENST00000384724 107 ntBASIC1.43□□□□□ -2.18
RPGRIP1Q96KN7 RNU6-700P-201ENST00000391043 107 ntBASIC1.43□□□□□ -2.18
RPGRIP1Q96KN7 RNU6-876P-201ENST00000391295 104 ntBASIC1.43□□□□□ -2.18
RPGRIP1Q96KN7 RNU6-1001P-201ENST00000411265 100 ntBASIC1.43□□□□□ -2.18
RPGRIP1Q96KN7 EIF1P2-201ENST00000428233 350 ntBASIC1.43□□□□□ -2.18
RPGRIP1Q96KN7 MTND4P18-201ENST00000447010 465 ntBASIC1.43□□□□□ -2.18
RPGRIP1Q96KN7 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.43□□□□□ -2.18
RPGRIP1Q96KN7 AC068338.1-201ENST00000565567 176 ntBASIC1.43□□□□□ -2.18
RPGRIP1Q96KN7 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.43□□□□□ -2.18
RPGRIP1Q96KN7 AC125232.2-201ENST00000592457 143 ntBASIC1.43□□□□□ -2.18
RPGRIP1Q96KN7 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.43□□□□□ -2.18
RPGRIP1Q96KN7 MIR26B-201ENST00000362251 77 ntBASIC1.42□□□□□ -2.18
RPGRIP1Q96KN7 RNU6-342P-201ENST00000384521 104 ntBASIC1.42□□□□□ -2.18
RPGRIP1Q96KN7 MIR598-201ENST00000384868 97 ntBASIC1.42□□□□□ -2.18
RPGRIP1Q96KN7 MT-TL1-201ENST00000386347 75 ntBASIC1.42□□□□□ -2.18
RPGRIP1Q96KN7 RNA5SP109-201ENST00000391010 116 ntBASIC1.42□□□□□ -2.18
RPGRIP1Q96KN7 AL161935.2-201ENST00000414627 60 ntBASIC1.42□□□□□ -2.18
RPGRIP1Q96KN7 RPL30P13-201ENST00000418873 348 ntBASIC1.42□□□□□ -2.18
RPGRIP1Q96KN7 AL606517.2-201ENST00000442855 241 ntBASIC1.42□□□□□ -2.18
RPGRIP1Q96KN7 RNU7-87P-201ENST00000459343 62 ntBASIC1.42□□□□□ -2.18
RPGRIP1Q96KN7 RPS26P55-201ENST00000471178 356 ntBASIC1.42□□□□□ -2.18
RPGRIP1Q96KN7 AC082651.2-201ENST00000496833 166 ntBASIC1.42□□□□□ -2.18
RPGRIP1Q96KN7 HMGN1P12-201ENST00000499125 195 ntBASIC1.42□□□□□ -2.18
RPGRIP1Q96KN7 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.42□□□□□ -2.18
RPGRIP1Q96KN7 RNU6-1223P-201ENST00000517124 104 ntBASIC1.42□□□□□ -2.18
RPGRIP1Q96KN7 AC090617.3-201ENST00000573670 475 ntBASIC1.42□□□□□ -2.18
RPGRIP1Q96KN7 AL359075.3-201ENST00000613288 217 ntBASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 187.7 ms