Protein–RNA interactions for Protein: Q96EY7

PTCD3, Pentatricopeptide repeat domain-containing protein 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3Q96EY7 AC010329.5-201ENST00000623497 2174 ntBASIC2.58□□□□□ -2
PTCD3Q96EY7 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.58□□□□□ -2
PTCD3Q96EY7 RNU6-1048P-201ENST00000364054 107 ntBASIC2.57□□□□□ -2
PTCD3Q96EY7 RNU6-234P-201ENST00000365229 104 ntBASIC2.57□□□□□ -2
PTCD3Q96EY7 Y_RNA.506-201ENST00000384494 102 ntBASIC2.57□□□□□ -2
PTCD3Q96EY7 AL355796.1-201ENST00000406706 323 ntBASIC2.57□□□□□ -2
PTCD3Q96EY7 RPS12P2-201ENST00000439728 269 ntBASIC2.57□□□□□ -2
PTCD3Q96EY7 RNU7-57P-201ENST00000459540 60 ntBASIC2.57□□□□□ -2
PTCD3Q96EY7 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.57□□□□□ -2
PTCD3Q96EY7 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.57□□□□□ -2
PTCD3Q96EY7 SNORA31.15-201ENST00000516771 132 ntBASIC2.57□□□□□ -2
PTCD3Q96EY7 MIR4446-201ENST00000578505 67 ntBASIC2.57□□□□□ -2
PTCD3Q96EY7 ELOCP29-201ENST00000588193 334 ntBASIC2.57□□□□□ -2
PTCD3Q96EY7 MIR1248-201ENST00000629190 106 ntBASIC2.57□□□□□ -2
PTCD3Q96EY7 AC080128.1-201ENST00000474389 1917 ntBASIC2.56□□□□□ -2
PTCD3Q96EY7 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
PTCD3Q96EY7 Y_RNA.310-201ENST00000365063 113 ntBASIC2.56□□□□□ -2
PTCD3Q96EY7 Y_RNA.368-201ENST00000365547 113 ntBASIC2.56□□□□□ -2
PTCD3Q96EY7 MIR300-201ENST00000401138 83 ntBASIC2.56□□□□□ -2
PTCD3Q96EY7 RNU6-394P-201ENST00000410735 107 ntBASIC2.56□□□□□ -2
PTCD3Q96EY7 MIR3199-1-201ENST00000582434 88 ntBASIC2.56□□□□□ -2
PTCD3Q96EY7 SCARNA15.3-201ENST00000626315 122 ntBASIC2.56□□□□□ -2
PTCD3Q96EY7 SCARNA4.1-201ENST00000628597 123 ntBASIC2.56□□□□□ -2
PTCD3Q96EY7 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.56□□□□□ -2
PTCD3Q96EY7 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
PTCD3Q96EY7 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
PTCD3Q96EY7 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
PTCD3Q96EY7 Y_RNA.124-201ENST00000363339 93 ntBASIC2.55□□□□□ -2
PTCD3Q96EY7 Y_RNA.170-201ENST00000363746 110 ntBASIC2.55□□□□□ -2
PTCD3Q96EY7 Y_RNA.172-201ENST00000363765 102 ntBASIC2.55□□□□□ -2
PTCD3Q96EY7 SNORD31B-201ENST00000364977 69 ntBASIC2.55□□□□□ -2
PTCD3Q96EY7 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.55□□□□□ -2
PTCD3Q96EY7 SNORA72.4-201ENST00000384174 132 ntBASIC2.55□□□□□ -2
PTCD3Q96EY7 SNORD14D-201ENST00000384390 87 ntBASIC2.55□□□□□ -2
PTCD3Q96EY7 Y_RNA.571-201ENST00000384753 98 ntBASIC2.55□□□□□ -2
PTCD3Q96EY7 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
PTCD3Q96EY7 RNU6-710P-201ENST00000410424 105 ntBASIC2.55□□□□□ -2
PTCD3Q96EY7 RNU6-1135P-201ENST00000411083 103 ntBASIC2.55□□□□□ -2
PTCD3Q96EY7 AC016717.1-201ENST00000448918 286 ntBASIC2.55□□□□□ -2
PTCD3Q96EY7 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.55□□□□□ -2
PTCD3Q96EY7 RNU6-965P-201ENST00000516721 96 ntBASIC2.55□□□□□ -2
PTCD3Q96EY7 AC100767.1-201ENST00000528178 123 ntBASIC2.55□□□□□ -2
PTCD3Q96EY7 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.55□□□□□ -2
PTCD3Q96EY7 AC013791.1-201ENST00000616619 62 ntBASIC2.55□□□□□ -2
PTCD3Q96EY7 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.55□□□□□ -2
PTCD3Q96EY7 MIR7157-201ENST00000635801 60 ntBASIC2.55□□□□□ -2
PTCD3Q96EY7 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
PTCD3Q96EY7 AC134026.1-201ENST00000623249 2239 ntBASIC2.54□□□□□ -2
PTCD3Q96EY7 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
PTCD3Q96EY7 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.54□□□□□ -2
PTCD3Q96EY7 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
PTCD3Q96EY7 SNORA20B-201ENST00000384220 132 ntBASIC2.54□□□□□ -2
PTCD3Q96EY7 RNU6-804P-201ENST00000384286 107 ntBASIC2.54□□□□□ -2
PTCD3Q96EY7 RNU6-975P-201ENST00000384296 105 ntBASIC2.54□□□□□ -2
PTCD3Q96EY7 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.54□□□□□ -2
PTCD3Q96EY7 RNU6-1278P-201ENST00000516130 107 ntBASIC2.54□□□□□ -2
PTCD3Q96EY7 MTND5P41-201ENST00000517498 206 ntBASIC2.54□□□□□ -2
PTCD3Q96EY7 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.54□□□□□ -2
PTCD3Q96EY7 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.54□□□□□ -2
PTCD3Q96EY7 AC105245.1-201ENST00000581934 244 ntBASIC2.54□□□□□ -2
PTCD3Q96EY7 MIR5092-201ENST00000583139 88 ntBASIC2.54□□□□□ -2
PTCD3Q96EY7 MIR4753-201ENST00000585119 83 ntBASIC2.54□□□□□ -2
PTCD3Q96EY7 RPL12P50-201ENST00000603116 116 ntBASIC2.54□□□□□ -2
PTCD3Q96EY7 AC025754.2-201ENST00000606491 432 ntBASIC2.54□□□□□ -2
PTCD3Q96EY7 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.54□□□□□ -2
PTCD3Q96EY7 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
PTCD3Q96EY7 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2
PTCD3Q96EY7 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.53□□□□□ -2
PTCD3Q96EY7 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
PTCD3Q96EY7 Z82209.1-201ENST00000422141 2135 ntBASIC2.53□□□□□ -2
PTCD3Q96EY7 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
PTCD3Q96EY7 AL157777.2-201ENST00000258070 137 ntBASIC2.53□□□□□ -2
PTCD3Q96EY7 RNU4-10P-201ENST00000364383 140 ntBASIC2.53□□□□□ -2
PTCD3Q96EY7 Y_RNA.287-201ENST00000364853 94 ntBASIC2.53□□□□□ -2
PTCD3Q96EY7 Y_RNA.341-201ENST00000365341 102 ntBASIC2.53□□□□□ -2
PTCD3Q96EY7 Y_RNA.441-201ENST00000384123 112 ntBASIC2.53□□□□□ -2
PTCD3Q96EY7 Y_RNA.456-201ENST00000384232 111 ntBASIC2.53□□□□□ -2
PTCD3Q96EY7 MIR627-201ENST00000384979 97 ntBASIC2.53□□□□□ -2
PTCD3Q96EY7 MIR95-201ENST00000385072 81 ntBASIC2.53□□□□□ -2
PTCD3Q96EY7 MTCO2P33-201ENST00000402100 465 ntBASIC2.53□□□□□ -2
PTCD3Q96EY7 RNU6-855P-201ENST00000410395 104 ntBASIC2.53□□□□□ -2
PTCD3Q96EY7 RNU5E-9P-201ENST00000411164 104 ntBASIC2.53□□□□□ -2
PTCD3Q96EY7 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.53□□□□□ -2
PTCD3Q96EY7 AL121890.1-201ENST00000435457 205 ntBASIC2.53□□□□□ -2
PTCD3Q96EY7 HMGN2P18-201ENST00000450680 270 ntBASIC2.53□□□□□ -2
PTCD3Q96EY7 AC016925.1-201ENST00000458303 298 ntBASIC2.53□□□□□ -2
PTCD3Q96EY7 SNORD65B-201ENST00000459126 73 ntBASIC2.53□□□□□ -2
PTCD3Q96EY7 RNU6-221P-201ENST00000459541 99 ntBASIC2.53□□□□□ -2
PTCD3Q96EY7 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.53□□□□□ -2
PTCD3Q96EY7 Y_RNA.703-201ENST00000516846 111 ntBASIC2.53□□□□□ -2
PTCD3Q96EY7 MIR3144-201ENST00000579460 79 ntBASIC2.53□□□□□ -2
PTCD3Q96EY7 AC069294.1-201ENST00000608397 350 ntBASIC2.53□□□□□ -2
PTCD3Q96EY7 AC104465.1-201ENST00000611365 139 ntBASIC2.53□□□□□ -2
PTCD3Q96EY7 snoZ196.1-201ENST00000625269 89 ntBASIC2.53□□□□□ -2
PTCD3Q96EY7 FO624990.1-201ENST00000636373 85 ntBASIC2.53□□□□□ -2
PTCD3Q96EY7 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
PTCD3Q96EY7 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2.01
PTCD3Q96EY7 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.52□□□□□ -2.01
PTCD3Q96EY7 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
PTCD3Q96EY7 Y_RNA.7-201ENST00000362352 102 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 176.6 ms