Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 HMGN2P18-201ENST00000450680 270 ntBASIC2.57□□□□□ -2
RAPGEF4Q8WZA2 Y_RNA.668-201ENST00000516233 93 ntBASIC2.57□□□□□ -2
RAPGEF4Q8WZA2 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.57□□□□□ -2
RAPGEF4Q8WZA2 NDUFA5P6-201ENST00000542110 379 ntBASIC2.57□□□□□ -2
RAPGEF4Q8WZA2 AC055872.1-201ENST00000570978 278 ntBASIC2.57□□□□□ -2
RAPGEF4Q8WZA2 MIR4446-201ENST00000578505 67 ntBASIC2.57□□□□□ -2
RAPGEF4Q8WZA2 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.57□□□□□ -2
RAPGEF4Q8WZA2 SNRPGP19-201ENST00000603826 189 ntBASIC2.57□□□□□ -2
RAPGEF4Q8WZA2 MIR3674-201ENST00000636576 68 ntBASIC2.57□□□□□ -2
RAPGEF4Q8WZA2 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.56□□□□□ -2
RAPGEF4Q8WZA2 Y_RNA.193-201ENST00000363979 102 ntBASIC2.56□□□□□ -2
RAPGEF4Q8WZA2 RNU6-1305P-201ENST00000364353 104 ntBASIC2.56□□□□□ -2
RAPGEF4Q8WZA2 Y_RNA.332-201ENST00000365271 113 ntBASIC2.56□□□□□ -2
RAPGEF4Q8WZA2 Y_RNA.376-201ENST00000365638 108 ntBASIC2.56□□□□□ -2
RAPGEF4Q8WZA2 MIR548B-201ENST00000385247 97 ntBASIC2.56□□□□□ -2
RAPGEF4Q8WZA2 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.56□□□□□ -2
RAPGEF4Q8WZA2 RNU2-20P-201ENST00000410425 191 ntBASIC2.56□□□□□ -2
RAPGEF4Q8WZA2 SUMO1P4-201ENST00000429430 302 ntBASIC2.56□□□□□ -2
RAPGEF4Q8WZA2 AC098869.1-201ENST00000481627 292 ntBASIC2.56□□□□□ -2
RAPGEF4Q8WZA2 AC104435.1-201ENST00000483483 166 ntBASIC2.56□□□□□ -2
RAPGEF4Q8WZA2 AC093259.1-201ENST00000509755 300 ntBASIC2.56□□□□□ -2
RAPGEF4Q8WZA2 RNU6-496P-201ENST00000516145 99 ntBASIC2.56□□□□□ -2
RAPGEF4Q8WZA2 PRELID2P1-201ENST00000552837 301 ntBASIC2.56□□□□□ -2
RAPGEF4Q8WZA2 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.56□□□□□ -2
RAPGEF4Q8WZA2 AL109918.3-201ENST00000603072 338 ntBASIC2.56□□□□□ -2
RAPGEF4Q8WZA2 AC022441.3-201ENST00000605737 136 ntBASIC2.56□□□□□ -2
RAPGEF4Q8WZA2 AL137847.3-201ENST00000611521 109 ntBASIC2.56□□□□□ -2
RAPGEF4Q8WZA2 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
RAPGEF4Q8WZA2 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
RAPGEF4Q8WZA2 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.56□□□□□ -2
RAPGEF4Q8WZA2 Y_RNA.396-201ENST00000383949 103 ntBASIC2.55□□□□□ -2
RAPGEF4Q8WZA2 RNU6-975P-201ENST00000384296 105 ntBASIC2.55□□□□□ -2
RAPGEF4Q8WZA2 MT-TW-201ENST00000387382 68 ntBASIC2.55□□□□□ -2
RAPGEF4Q8WZA2 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.55□□□□□ -2
RAPGEF4Q8WZA2 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.55□□□□□ -2
RAPGEF4Q8WZA2 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.55□□□□□ -2
RAPGEF4Q8WZA2 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.55□□□□□ -2
RAPGEF4Q8WZA2 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.55□□□□□ -2
RAPGEF4Q8WZA2 AC114982.1-201ENST00000469402 321 ntBASIC2.55□□□□□ -2
RAPGEF4Q8WZA2 SNORA31.11-201ENST00000516528 139 ntBASIC2.55□□□□□ -2
RAPGEF4Q8WZA2 RNA5SP490-201ENST00000517141 136 ntBASIC2.55□□□□□ -2
RAPGEF4Q8WZA2 RNA5SP402-201ENST00000517148 110 ntBASIC2.55□□□□□ -2
RAPGEF4Q8WZA2 RNU6-667P-201ENST00000517186 102 ntBASIC2.55□□□□□ -2
RAPGEF4Q8WZA2 MIR4753-201ENST00000585119 83 ntBASIC2.55□□□□□ -2
RAPGEF4Q8WZA2 AC127459.3-201ENST00000624328 466 ntBASIC2.55□□□□□ -2
RAPGEF4Q8WZA2 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.55□□□□□ -2
RAPGEF4Q8WZA2 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.54□□□□□ -2
RAPGEF4Q8WZA2 Y_RNA.84-201ENST00000363011 104 ntBASIC2.54□□□□□ -2
RAPGEF4Q8WZA2 SNORD81.1-201ENST00000363064 77 ntBASIC2.54□□□□□ -2
RAPGEF4Q8WZA2 SNORD113-8-201ENST00000363497 74 ntBASIC2.54□□□□□ -2
RAPGEF4Q8WZA2 RNU6-702P-201ENST00000364982 107 ntBASIC2.54□□□□□ -2
RAPGEF4Q8WZA2 RNU6-1175P-201ENST00000365200 107 ntBASIC2.54□□□□□ -2
RAPGEF4Q8WZA2 Y_RNA.461-201ENST00000384263 103 ntBASIC2.54□□□□□ -2
RAPGEF4Q8WZA2 MIR215-201ENST00000384858 110 ntBASIC2.54□□□□□ -2
RAPGEF4Q8WZA2 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.54□□□□□ -2
RAPGEF4Q8WZA2 MIR1302-6-201ENST00000408466 90 ntBASIC2.54□□□□□ -2
RAPGEF4Q8WZA2 MIR1185-2-201ENST00000408687 86 ntBASIC2.54□□□□□ -2
RAPGEF4Q8WZA2 RNU6-1203P-201ENST00000410703 110 ntBASIC2.54□□□□□ -2
RAPGEF4Q8WZA2 AC003989.2-201ENST00000440224 169 ntBASIC2.54□□□□□ -2
RAPGEF4Q8WZA2 AC009238.1-201ENST00000442165 424 ntBASIC2.54□□□□□ -2
RAPGEF4Q8WZA2 AC009237.6-201ENST00000446969 424 ntBASIC2.54□□□□□ -2
RAPGEF4Q8WZA2 AL137159.1-201ENST00000452808 512 ntBASIC2.54□□□□□ -2
RAPGEF4Q8WZA2 SEPT14P8-201ENST00000508026 178 ntBASIC2.54□□□□□ -2
RAPGEF4Q8WZA2 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.54□□□□□ -2
RAPGEF4Q8WZA2 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.54□□□□□ -2
RAPGEF4Q8WZA2 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.54□□□□□ -2
RAPGEF4Q8WZA2 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.54□□□□□ -2
RAPGEF4Q8WZA2 SNORD113-5-201ENST00000607261 78 ntBASIC2.54□□□□□ -2
RAPGEF4Q8WZA2 AC011373.1-201ENST00000607270 237 ntBASIC2.54□□□□□ -2
RAPGEF4Q8WZA2 AC004467.1-201ENST00000615678 330 ntBASIC2.54□□□□□ -2
RAPGEF4Q8WZA2 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.54□□□□□ -2
RAPGEF4Q8WZA2 U6.104-201ENST00000637979 90 ntBASIC2.54□□□□□ -2
RAPGEF4Q8WZA2 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
RAPGEF4Q8WZA2 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
RAPGEF4Q8WZA2 Y_RNA.101-201ENST00000363154 102 ntBASIC2.53□□□□□ -2
RAPGEF4Q8WZA2 RNU6-454P-201ENST00000364292 107 ntBASIC2.53□□□□□ -2
RAPGEF4Q8WZA2 RNU6-1072P-201ENST00000384703 107 ntBASIC2.53□□□□□ -2
RAPGEF4Q8WZA2 RNU6-443P-201ENST00000384780 107 ntBASIC2.53□□□□□ -2
RAPGEF4Q8WZA2 RNA5SP475-201ENST00000410568 110 ntBASIC2.53□□□□□ -2
RAPGEF4Q8WZA2 RNU6-1199P-201ENST00000411249 104 ntBASIC2.53□□□□□ -2
RAPGEF4Q8WZA2 AC096920.1-201ENST00000423991 241 ntBASIC2.53□□□□□ -2
RAPGEF4Q8WZA2 AC108667.1-201ENST00000428618 249 ntBASIC2.53□□□□□ -2
RAPGEF4Q8WZA2 AC074290.1-201ENST00000448883 135 ntBASIC2.53□□□□□ -2
RAPGEF4Q8WZA2 HSPE1P25-201ENST00000455484 251 ntBASIC2.53□□□□□ -2
RAPGEF4Q8WZA2 RNU7-26P-201ENST00000458980 63 ntBASIC2.53□□□□□ -2
RAPGEF4Q8WZA2 RNU6-107P-201ENST00000516643 102 ntBASIC2.53□□□□□ -2
RAPGEF4Q8WZA2 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.53□□□□□ -2
RAPGEF4Q8WZA2 MIR4658-201ENST00000584344 65 ntBASIC2.53□□□□□ -2
RAPGEF4Q8WZA2 AL590240.4-201ENST00000616908 390 ntBASIC2.53□□□□□ -2
RAPGEF4Q8WZA2 AC091932.3-201ENST00000624223 323 ntBASIC2.53□□□□□ -2
RAPGEF4Q8WZA2 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2.01
RAPGEF4Q8WZA2 RNU4-90P-201ENST00000362773 141 ntBASIC2.52□□□□□ -2.01
RAPGEF4Q8WZA2 Y_RNA.238-201ENST00000364441 102 ntBASIC2.52□□□□□ -2.01
RAPGEF4Q8WZA2 RNU6-438P-201ENST00000365561 103 ntBASIC2.52□□□□□ -2.01
RAPGEF4Q8WZA2 Y_RNA.483-201ENST00000384380 101 ntBASIC2.52□□□□□ -2.01
RAPGEF4Q8WZA2 RNU2-54P-201ENST00000410299 190 ntBASIC2.52□□□□□ -2.01
RAPGEF4Q8WZA2 SRIP3-201ENST00000413200 219 ntBASIC2.52□□□□□ -2.01
RAPGEF4Q8WZA2 RPL23AP36-201ENST00000413895 458 ntBASIC2.52□□□□□ -2.01
RAPGEF4Q8WZA2 AC123900.1-201ENST00000420390 96 ntBASIC2.52□□□□□ -2.01
RAPGEF4Q8WZA2 MTCO1P44-201ENST00000441935 243 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms