Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 Y_RNA.180-201ENST00000363867 113 ntBASIC2.14□□□□□ -2.07
SNED1Q8TER0 SNORD115-32-201ENST00000364079 82 ntBASIC2.14□□□□□ -2.07
SNED1Q8TER0 RNU6-392P-201ENST00000364926 101 ntBASIC2.14□□□□□ -2.07
SNED1Q8TER0 RNU6-1280P-201ENST00000365211 107 ntBASIC2.14□□□□□ -2.07
SNED1Q8TER0 SNORD63-201ENST00000384262 68 ntBASIC2.14□□□□□ -2.07
SNED1Q8TER0 RNU6-318P-201ENST00000384283 103 ntBASIC2.14□□□□□ -2.07
SNED1Q8TER0 Y_RNA.504-201ENST00000384481 104 ntBASIC2.14□□□□□ -2.07
SNED1Q8TER0 MIR544A-201ENST00000384855 91 ntBASIC2.14□□□□□ -2.07
SNED1Q8TER0 U6atac.2-201ENST00000408644 118 ntBASIC2.14□□□□□ -2.07
SNED1Q8TER0 SNORD12B-201ENST00000410433 91 ntBASIC2.14□□□□□ -2.07
SNED1Q8TER0 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.14□□□□□ -2.07
SNED1Q8TER0 NDUFB4P10-201ENST00000452541 359 ntBASIC2.14□□□□□ -2.07
SNED1Q8TER0 SEPT14P8-201ENST00000508026 178 ntBASIC2.14□□□□□ -2.07
SNED1Q8TER0 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.14□□□□□ -2.07
SNED1Q8TER0 MIR4765-201ENST00000585007 77 ntBASIC2.14□□□□□ -2.07
SNED1Q8TER0 AL356157.2-201ENST00000605122 111 ntBASIC2.14□□□□□ -2.07
SNED1Q8TER0 AC069294.1-201ENST00000608397 350 ntBASIC2.14□□□□□ -2.07
SNED1Q8TER0 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.14□□□□□ -2.07
SNED1Q8TER0 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.14□□□□□ -2.07
SNED1Q8TER0 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.14□□□□□ -2.07
SNED1Q8TER0 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.14□□□□□ -2.07
SNED1Q8TER0 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.14□□□□□ -2.07
SNED1Q8TER0 Y_RNA.199-201ENST00000364014 102 ntBASIC2.13□□□□□ -2.07
SNED1Q8TER0 SNORD32A-201ENST00000364805 84 ntBASIC2.13□□□□□ -2.07
SNED1Q8TER0 RNU6-290P-201ENST00000365212 101 ntBASIC2.13□□□□□ -2.07
SNED1Q8TER0 RNU6-102P-201ENST00000384485 104 ntBASIC2.13□□□□□ -2.07
SNED1Q8TER0 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
SNED1Q8TER0 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
SNED1Q8TER0 SNORA53-201ENST00000391141 249 ntBASIC2.13□□□□□ -2.07
SNED1Q8TER0 FTH1P15-201ENST00000406984 280 ntBASIC2.13□□□□□ -2.07
SNED1Q8TER0 RNU5A-5P-201ENST00000411054 116 ntBASIC2.13□□□□□ -2.07
SNED1Q8TER0 Y_RNA.793-201ENST00000411222 111 ntBASIC2.13□□□□□ -2.07
SNED1Q8TER0 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.13□□□□□ -2.07
SNED1Q8TER0 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.13□□□□□ -2.07
SNED1Q8TER0 AC012308.1-201ENST00000451232 178 ntBASIC2.13□□□□□ -2.07
SNED1Q8TER0 HSPE1P25-201ENST00000455484 251 ntBASIC2.13□□□□□ -2.07
SNED1Q8TER0 MED28P2-201ENST00000475771 317 ntBASIC2.13□□□□□ -2.07
SNED1Q8TER0 AF186996.7-201ENST00000492781 209 ntBASIC2.13□□□□□ -2.07
SNED1Q8TER0 AC090255.1-201ENST00000495779 349 ntBASIC2.13□□□□□ -2.07
SNED1Q8TER0 RNU6-1114P-201ENST00000516022 107 ntBASIC2.13□□□□□ -2.07
SNED1Q8TER0 HSPE1P4-201ENST00000550617 308 ntBASIC2.13□□□□□ -2.07
SNED1Q8TER0 SNORD113-5-201ENST00000607261 78 ntBASIC2.13□□□□□ -2.07
SNED1Q8TER0 AC245884.12-201ENST00000615364 59 ntBASIC2.13□□□□□ -2.07
SNED1Q8TER0 MIR6134-201ENST00000617606 109 ntBASIC2.13□□□□□ -2.07
SNED1Q8TER0 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
SNED1Q8TER0 HAUS6P2-201ENST00000433254 2404 ntBASIC2.13□□□□□ -2.07
SNED1Q8TER0 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.13□□□□□ -2.07
SNED1Q8TER0 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
SNED1Q8TER0 AL359854.1-201ENST00000614203 1594 ntBASIC2.12□□□□□ -2.07
SNED1Q8TER0 RNU6-626P-201ENST00000363354 107 ntBASIC2.12□□□□□ -2.07
SNED1Q8TER0 RNU6-281P-201ENST00000384212 103 ntBASIC2.12□□□□□ -2.07
SNED1Q8TER0 RNU6-19P-201ENST00000384718 107 ntBASIC2.12□□□□□ -2.07
SNED1Q8TER0 RNU1-139P-201ENST00000391307 165 ntBASIC2.12□□□□□ -2.07
SNED1Q8TER0 MIR1276-201ENST00000408707 83 ntBASIC2.12□□□□□ -2.07
SNED1Q8TER0 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.12□□□□□ -2.07
SNED1Q8TER0 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.12□□□□□ -2.07
SNED1Q8TER0 AC104332.1-201ENST00000440471 797 ntBASIC2.12□□□□□ -2.07
SNED1Q8TER0 AC007969.2-201ENST00000441891 191 ntBASIC2.12□□□□□ -2.07
SNED1Q8TER0 GPM6BP3-201ENST00000442797 145 ntBASIC2.12□□□□□ -2.07
SNED1Q8TER0 Y_RNA.644-201ENST00000459006 113 ntBASIC2.12□□□□□ -2.07
SNED1Q8TER0 RNU6-581P-201ENST00000516214 105 ntBASIC2.12□□□□□ -2.07
SNED1Q8TER0 Y_RNA.674-201ENST00000516362 113 ntBASIC2.12□□□□□ -2.07
SNED1Q8TER0 RNU6-1198P-201ENST00000516904 67 ntBASIC2.12□□□□□ -2.07
SNED1Q8TER0 RPS15AP11-201ENST00000594193 385 ntBASIC2.12□□□□□ -2.07
SNED1Q8TER0 AL645939.4-201ENST00000604495 135 ntBASIC2.12□□□□□ -2.07
SNED1Q8TER0 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.12□□□□□ -2.07
SNED1Q8TER0 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
SNED1Q8TER0 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
SNED1Q8TER0 Y_RNA.44-201ENST00000362676 108 ntBASIC2.11□□□□□ -2.07
SNED1Q8TER0 RNA5SP361-201ENST00000362686 118 ntBASIC2.11□□□□□ -2.07
SNED1Q8TER0 RNU6-886P-201ENST00000384319 105 ntBASIC2.11□□□□□ -2.07
SNED1Q8TER0 RNU6-21P-201ENST00000384710 107 ntBASIC2.11□□□□□ -2.07
SNED1Q8TER0 RNU4-30P-201ENST00000410245 143 ntBASIC2.11□□□□□ -2.07
SNED1Q8TER0 RPL23AP95-201ENST00000426806 265 ntBASIC2.11□□□□□ -2.07
SNED1Q8TER0 AC005002.2-201ENST00000438228 269 ntBASIC2.11□□□□□ -2.07
SNED1Q8TER0 AL161651.1-201ENST00000440882 223 ntBASIC2.11□□□□□ -2.07
SNED1Q8TER0 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.11□□□□□ -2.07
SNED1Q8TER0 RNA5SP112-201ENST00000515937 99 ntBASIC2.11□□□□□ -2.07
SNED1Q8TER0 RN7SKP49-201ENST00000516675 260 ntBASIC2.11□□□□□ -2.07
SNED1Q8TER0 RNU1-40P-201ENST00000516816 164 ntBASIC2.11□□□□□ -2.07
SNED1Q8TER0 RNU1-97P-201ENST00000516872 164 ntBASIC2.11□□□□□ -2.07
SNED1Q8TER0 RNU7-110P-201ENST00000516891 62 ntBASIC2.11□□□□□ -2.07
SNED1Q8TER0 RNU2-31P-201ENST00000516954 155 ntBASIC2.11□□□□□ -2.07
SNED1Q8TER0 RNU6-789P-201ENST00000517105 102 ntBASIC2.11□□□□□ -2.07
SNED1Q8TER0 UBL5P4-201ENST00000562584 236 ntBASIC2.11□□□□□ -2.07
SNED1Q8TER0 AC009127.3-201ENST00000570531 403 ntBASIC2.11□□□□□ -2.07
SNED1Q8TER0 MIR5695-201ENST00000579717 85 ntBASIC2.11□□□□□ -2.07
SNED1Q8TER0 AL138963.2-201ENST00000605137 226 ntBASIC2.11□□□□□ -2.07
SNED1Q8TER0 AC037487.3-201ENST00000606668 112 ntBASIC2.11□□□□□ -2.07
SNED1Q8TER0 U2.14-201ENST00000615943 113 ntBASIC2.11□□□□□ -2.07
SNED1Q8TER0 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.11□□□□□ -2.07
SNED1Q8TER0 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.1□□□□□ -2.07
SNED1Q8TER0 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
SNED1Q8TER0 Y_RNA.76-201ENST00000362931 109 ntBASIC2.1□□□□□ -2.07
SNED1Q8TER0 RNU5B-2P-201ENST00000363036 113 ntBASIC2.1□□□□□ -2.07
SNED1Q8TER0 RNU6-486P-201ENST00000363116 107 ntBASIC2.1□□□□□ -2.07
SNED1Q8TER0 RNU6-774P-201ENST00000363238 107 ntBASIC2.1□□□□□ -2.07
SNED1Q8TER0 RNU6-137P-201ENST00000363680 108 ntBASIC2.1□□□□□ -2.07
SNED1Q8TER0 Y_RNA.286-201ENST00000364813 102 ntBASIC2.1□□□□□ -2.07
SNED1Q8TER0 Y_RNA.319-201ENST00000365138 92 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 191.7 ms