Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AC104027.1-201ENST00000521887 300 ntBASIC3.39□□□□□ -1.87
SHKBP1Q8TBC3 AP003327.1-201ENST00000529684 127 ntBASIC3.39□□□□□ -1.87
SHKBP1Q8TBC3 AC007012.1-201ENST00000567192 175 ntBASIC3.39□□□□□ -1.87
SHKBP1Q8TBC3 SCARNA15.3-201ENST00000626315 122 ntBASIC3.39□□□□□ -1.87
SHKBP1Q8TBC3 SCARNA4.1-201ENST00000628597 123 ntBASIC3.39□□□□□ -1.87
SHKBP1Q8TBC3 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.39□□□□□ -1.87
SHKBP1Q8TBC3 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
SHKBP1Q8TBC3 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
SHKBP1Q8TBC3 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.38□□□□□ -1.87
SHKBP1Q8TBC3 AL136360.1-201ENST00000503377 1900 ntBASIC3.38□□□□□ -1.87
SHKBP1Q8TBC3 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.38□□□□□ -1.87
SHKBP1Q8TBC3 snoU2_19.1-201ENST00000362361 80 ntBASIC3.38□□□□□ -1.87
SHKBP1Q8TBC3 SNORA51.10-201ENST00000384418 136 ntBASIC3.38□□□□□ -1.87
SHKBP1Q8TBC3 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
SHKBP1Q8TBC3 RNU6-1275P-201ENST00000391087 107 ntBASIC3.38□□□□□ -1.87
SHKBP1Q8TBC3 SNORA11.2-201ENST00000408318 127 ntBASIC3.38□□□□□ -1.87
SHKBP1Q8TBC3 RNA5SP293-201ENST00000410527 113 ntBASIC3.38□□□□□ -1.87
SHKBP1Q8TBC3 AC083906.5-201ENST00000503722 328 ntBASIC3.38□□□□□ -1.87
SHKBP1Q8TBC3 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.38□□□□□ -1.87
SHKBP1Q8TBC3 AC010598.1-201ENST00000510378 103 ntBASIC3.38□□□□□ -1.87
SHKBP1Q8TBC3 SNORA18.4-201ENST00000516440 124 ntBASIC3.38□□□□□ -1.87
SHKBP1Q8TBC3 AC107934.2-201ENST00000518653 310 ntBASIC3.38□□□□□ -1.87
SHKBP1Q8TBC3 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.38□□□□□ -1.87
SHKBP1Q8TBC3 MIR2682-201ENST00000580305 110 ntBASIC3.38□□□□□ -1.87
SHKBP1Q8TBC3 AC105245.1-201ENST00000581934 244 ntBASIC3.38□□□□□ -1.87
SHKBP1Q8TBC3 AL110115.1-201ENST00000614396 364 ntBASIC3.38□□□□□ -1.87
SHKBP1Q8TBC3 5S_rRNA.13-201ENST00000622298 123 ntBASIC3.38□□□□□ -1.87
SHKBP1Q8TBC3 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.38□□□□□ -1.87
SHKBP1Q8TBC3 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.38□□□□□ -1.87
SHKBP1Q8TBC3 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
SHKBP1Q8TBC3 AC017071.1-201ENST00000564407 2204 ntBASIC3.38□□□□□ -1.87
SHKBP1Q8TBC3 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.37□□□□□ -1.87
SHKBP1Q8TBC3 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
SHKBP1Q8TBC3 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SHKBP1Q8TBC3 RNA5SP125-201ENST00000364843 120 ntBASIC3.37□□□□□ -1.87
SHKBP1Q8TBC3 SNORA51.5-201ENST00000384126 131 ntBASIC3.37□□□□□ -1.87
SHKBP1Q8TBC3 Y_RNA.528-201ENST00000384575 108 ntBASIC3.37□□□□□ -1.87
SHKBP1Q8TBC3 RNA5SP229-201ENST00000410809 99 ntBASIC3.37□□□□□ -1.87
SHKBP1Q8TBC3 RNA5SP127-201ENST00000411051 133 ntBASIC3.37□□□□□ -1.87
SHKBP1Q8TBC3 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.37□□□□□ -1.87
SHKBP1Q8TBC3 AC006539.3-201ENST00000454258 129 ntBASIC3.37□□□□□ -1.87
SHKBP1Q8TBC3 AL441985.1-201ENST00000457727 251 ntBASIC3.37□□□□□ -1.87
SHKBP1Q8TBC3 AC010531.2-201ENST00000465012 153 ntBASIC3.37□□□□□ -1.87
SHKBP1Q8TBC3 AC005921.1-201ENST00000510589 286 ntBASIC3.37□□□□□ -1.87
SHKBP1Q8TBC3 RNA5SP20-201ENST00000515976 84 ntBASIC3.37□□□□□ -1.87
SHKBP1Q8TBC3 RNU6-638P-201ENST00000516582 104 ntBASIC3.37□□□□□ -1.87
SHKBP1Q8TBC3 RN7SKP289-201ENST00000517244 295 ntBASIC3.37□□□□□ -1.87
SHKBP1Q8TBC3 SCARNA20.6-201ENST00000517251 106 ntBASIC3.37□□□□□ -1.87
SHKBP1Q8TBC3 MIR3690-201ENST00000580266 75 ntBASIC3.37□□□□□ -1.87
SHKBP1Q8TBC3 AL365205.2-201ENST00000594586 68 ntBASIC3.37□□□□□ -1.87
SHKBP1Q8TBC3 AL929325.1-201ENST00000603096 117 ntBASIC3.37□□□□□ -1.87
SHKBP1Q8TBC3 uc_338.1-201ENST00000612113 180 ntBASIC3.37□□□□□ -1.87
SHKBP1Q8TBC3 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.37□□□□□ -1.87
SHKBP1Q8TBC3 AC006386.2-201ENST00000624491 75 ntBASIC3.37□□□□□ -1.87
SHKBP1Q8TBC3 AC012005.1-201ENST00000624575 75 ntBASIC3.37□□□□□ -1.87
SHKBP1Q8TBC3 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
SHKBP1Q8TBC3 AC103988.1-201ENST00000566382 2177 ntBASIC3.36□□□□□ -1.87
SHKBP1Q8TBC3 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SHKBP1Q8TBC3 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.36□□□□□ -1.87
SHKBP1Q8TBC3 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SHKBP1Q8TBC3 Y_RNA.549-201ENST00000384657 102 ntBASIC3.36□□□□□ -1.87
SHKBP1Q8TBC3 RNA5SP511-201ENST00000410487 115 ntBASIC3.36□□□□□ -1.87
SHKBP1Q8TBC3 ARF4P2-201ENST00000430209 526 ntBASIC3.36□□□□□ -1.87
SHKBP1Q8TBC3 CALM2P4-201ENST00000430810 426 ntBASIC3.36□□□□□ -1.87
SHKBP1Q8TBC3 MTATP6P21-201ENST00000440681 189 ntBASIC3.36□□□□□ -1.87
SHKBP1Q8TBC3 RNU7-57P-201ENST00000459540 60 ntBASIC3.36□□□□□ -1.87
SHKBP1Q8TBC3 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.36□□□□□ -1.87
SHKBP1Q8TBC3 RNU1-143P-201ENST00000516296 146 ntBASIC3.36□□□□□ -1.87
SHKBP1Q8TBC3 RNU6-1098P-201ENST00000516772 96 ntBASIC3.36□□□□□ -1.87
SHKBP1Q8TBC3 AC015720.1-201ENST00000565251 277 ntBASIC3.36□□□□□ -1.87
SHKBP1Q8TBC3 MIR3609-201ENST00000582661 80 ntBASIC3.36□□□□□ -1.87
SHKBP1Q8TBC3 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.36□□□□□ -1.87
SHKBP1Q8TBC3 U1.23-201ENST00000610293 146 ntBASIC3.36□□□□□ -1.87
SHKBP1Q8TBC3 RNU1-68P-201ENST00000615382 146 ntBASIC3.36□□□□□ -1.87
SHKBP1Q8TBC3 U1.39-201ENST00000621562 146 ntBASIC3.36□□□□□ -1.87
SHKBP1Q8TBC3 MIR7153-201ENST00000637758 57 ntBASIC3.36□□□□□ -1.87
SHKBP1Q8TBC3 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SHKBP1Q8TBC3 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SHKBP1Q8TBC3 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SHKBP1Q8TBC3 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SHKBP1Q8TBC3 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.36□□□□□ -1.87
SHKBP1Q8TBC3 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SHKBP1Q8TBC3 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.35□□□□□ -1.87
SHKBP1Q8TBC3 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.35□□□□□ -1.87
SHKBP1Q8TBC3 MIR148B-201ENST00000362252 99 ntBASIC3.35□□□□□ -1.87
SHKBP1Q8TBC3 SNORD56.3-201ENST00000363507 71 ntBASIC3.35□□□□□ -1.87
SHKBP1Q8TBC3 SNORD32B-201ENST00000364460 84 ntBASIC3.35□□□□□ -1.87
SHKBP1Q8TBC3 SNORD6-201ENST00000365444 73 ntBASIC3.35□□□□□ -1.87
SHKBP1Q8TBC3 SNORA7.4-201ENST00000384249 137 ntBASIC3.35□□□□□ -1.87
SHKBP1Q8TBC3 RNU1-57P-201ENST00000384491 166 ntBASIC3.35□□□□□ -1.87
SHKBP1Q8TBC3 MIR1302-5-201ENST00000408164 150 ntBASIC3.35□□□□□ -1.87
SHKBP1Q8TBC3 AC245291.1-201ENST00000419501 328 ntBASIC3.35□□□□□ -1.87
SHKBP1Q8TBC3 AF228730.3-201ENST00000436691 102 ntBASIC3.35□□□□□ -1.87
SHKBP1Q8TBC3 SNORD11-201ENST00000459124 84 ntBASIC3.35□□□□□ -1.87
SHKBP1Q8TBC3 snoU13.28-201ENST00000459235 104 ntBASIC3.35□□□□□ -1.87
SHKBP1Q8TBC3 AP000873.1-201ENST00000463987 400 ntBASIC3.35□□□□□ -1.87
SHKBP1Q8TBC3 RNA5SP236-201ENST00000516169 116 ntBASIC3.35□□□□□ -1.87
SHKBP1Q8TBC3 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.35□□□□□ -1.87
SHKBP1Q8TBC3 RPL23AP91-201ENST00000569211 455 ntBASIC3.35□□□□□ -1.87
SHKBP1Q8TBC3 UBL5P2-201ENST00000583788 219 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 133.2 ms