Protein–RNA interactions for Protein: Q8NEM2

SHCBP1, SHC SH2 domain-binding protein 1, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1Q8NEM2 RPL39P40-201ENST00000445481 146 ntBASIC2.92□□□□□ -1.94
SHCBP1Q8NEM2 RNU6-237P-201ENST00000515985 71 ntBASIC2.92□□□□□ -1.94
SHCBP1Q8NEM2 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.92□□□□□ -1.94
SHCBP1Q8NEM2 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.92□□□□□ -1.94
SHCBP1Q8NEM2 AC108706.1-201ENST00000611053 297 ntBASIC2.92□□□□□ -1.94
SHCBP1Q8NEM2 AC068700.1-201ENST00000565862 3754 ntBASIC2.92□□□□□ -1.94
SHCBP1Q8NEM2 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
SHCBP1Q8NEM2 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.91□□□□□ -1.94
SHCBP1Q8NEM2 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
SHCBP1Q8NEM2 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.91□□□□□ -1.94
SHCBP1Q8NEM2 Y_RNA.243-201ENST00000364481 109 ntBASIC2.91□□□□□ -1.94
SHCBP1Q8NEM2 SNORD113-1-201ENST00000365321 69 ntBASIC2.91□□□□□ -1.94
SHCBP1Q8NEM2 RNA5SP240-201ENST00000365355 128 ntBASIC2.91□□□□□ -1.94
SHCBP1Q8NEM2 MIR504-201ENST00000385065 83 ntBASIC2.91□□□□□ -1.94
SHCBP1Q8NEM2 MIR181B1-201ENST00000385240 110 ntBASIC2.91□□□□□ -1.94
SHCBP1Q8NEM2 MIR613-201ENST00000385248 95 ntBASIC2.91□□□□□ -1.94
SHCBP1Q8NEM2 FO393413.1-201ENST00000402892 195 ntBASIC2.91□□□□□ -1.94
SHCBP1Q8NEM2 HMGN2P35-201ENST00000412164 270 ntBASIC2.91□□□□□ -1.94
SHCBP1Q8NEM2 TOMM22P2-201ENST00000430735 237 ntBASIC2.91□□□□□ -1.94
SHCBP1Q8NEM2 Z98742.2-201ENST00000431564 187 ntBASIC2.91□□□□□ -1.94
SHCBP1Q8NEM2 SRIP1-201ENST00000489235 288 ntBASIC2.91□□□□□ -1.94
SHCBP1Q8NEM2 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.91□□□□□ -1.94
SHCBP1Q8NEM2 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.91□□□□□ -1.94
SHCBP1Q8NEM2 AC138915.1-201ENST00000565427 1685 ntBASIC2.91□□□□□ -1.94
SHCBP1Q8NEM2 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
SHCBP1Q8NEM2 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
SHCBP1Q8NEM2 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.94
SHCBP1Q8NEM2 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.9□□□□□ -1.95
SHCBP1Q8NEM2 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
SHCBP1Q8NEM2 Y_RNA.7-201ENST00000362352 102 ntBASIC2.9□□□□□ -1.95
SHCBP1Q8NEM2 VTRNA1-1-201ENST00000363120 99 ntBASIC2.9□□□□□ -1.95
SHCBP1Q8NEM2 RNU4-17P-201ENST00000365598 141 ntBASIC2.9□□□□□ -1.95
SHCBP1Q8NEM2 SNORD21-201ENST00000383953 95 ntBASIC2.9□□□□□ -1.95
SHCBP1Q8NEM2 SNORA26.5-201ENST00000391215 123 ntBASIC2.9□□□□□ -1.95
SHCBP1Q8NEM2 MIR548I2-201ENST00000408348 149 ntBASIC2.9□□□□□ -1.95
SHCBP1Q8NEM2 RNU2-2P-201ENST00000410396 191 ntBASIC2.9□□□□□ -1.95
SHCBP1Q8NEM2 AC097463.2-201ENST00000421074 142 ntBASIC2.9□□□□□ -1.95
SHCBP1Q8NEM2 EIF4EP4-201ENST00000424916 578 ntBASIC2.9□□□□□ -1.95
SHCBP1Q8NEM2 SEM1P1-201ENST00000506694 209 ntBASIC2.9□□□□□ -1.95
SHCBP1Q8NEM2 AC100767.1-201ENST00000528178 123 ntBASIC2.9□□□□□ -1.95
SHCBP1Q8NEM2 RNU2-4P-201ENST00000606190 192 ntBASIC2.9□□□□□ -1.95
SHCBP1Q8NEM2 U2.15-201ENST00000611544 191 ntBASIC2.9□□□□□ -1.95
SHCBP1Q8NEM2 U2.16-201ENST00000613119 191 ntBASIC2.9□□□□□ -1.95
SHCBP1Q8NEM2 U2.12-201ENST00000613778 191 ntBASIC2.9□□□□□ -1.95
SHCBP1Q8NEM2 U2.9-201ENST00000615427 191 ntBASIC2.9□□□□□ -1.95
SHCBP1Q8NEM2 AL078604.3-201ENST00000615580 211 ntBASIC2.9□□□□□ -1.95
SHCBP1Q8NEM2 U2.11-201ENST00000616345 191 ntBASIC2.9□□□□□ -1.95
SHCBP1Q8NEM2 U2.2-201ENST00000616535 191 ntBASIC2.9□□□□□ -1.95
SHCBP1Q8NEM2 U2.3-201ENST00000617785 191 ntBASIC2.9□□□□□ -1.95
SHCBP1Q8NEM2 U2.19-201ENST00000618602 191 ntBASIC2.9□□□□□ -1.95
SHCBP1Q8NEM2 RNU2-1-201ENST00000618664 191 ntBASIC2.9□□□□□ -1.95
SHCBP1Q8NEM2 U2.6-201ENST00000619225 191 ntBASIC2.9□□□□□ -1.95
SHCBP1Q8NEM2 U2.5-201ENST00000619465 191 ntBASIC2.9□□□□□ -1.95
SHCBP1Q8NEM2 U2.10-201ENST00000620268 191 ntBASIC2.9□□□□□ -1.95
SHCBP1Q8NEM2 AC008873.1-201ENST00000625051 138 ntBASIC2.9□□□□□ -1.95
SHCBP1Q8NEM2 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
SHCBP1Q8NEM2 RNU6-704P-201ENST00000364162 103 ntBASIC2.89□□□□□ -1.95
SHCBP1Q8NEM2 Y_RNA.238-201ENST00000364441 102 ntBASIC2.89□□□□□ -1.95
SHCBP1Q8NEM2 SNORD32B-201ENST00000364460 84 ntBASIC2.89□□□□□ -1.95
SHCBP1Q8NEM2 MIR548B-201ENST00000385247 97 ntBASIC2.89□□□□□ -1.95
SHCBP1Q8NEM2 AL135786.1-201ENST00000415892 214 ntBASIC2.89□□□□□ -1.95
SHCBP1Q8NEM2 Z98742.3-201ENST00000418637 326 ntBASIC2.89□□□□□ -1.95
SHCBP1Q8NEM2 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.89□□□□□ -1.95
SHCBP1Q8NEM2 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.89□□□□□ -1.95
SHCBP1Q8NEM2 AC136628.3-201ENST00000521868 290 ntBASIC2.89□□□□□ -1.95
SHCBP1Q8NEM2 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.89□□□□□ -1.95
SHCBP1Q8NEM2 AC004832.4-201ENST00000608952 331 ntBASIC2.89□□□□□ -1.95
SHCBP1Q8NEM2 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
SHCBP1Q8NEM2 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
SHCBP1Q8NEM2 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
SHCBP1Q8NEM2 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.88□□□□□ -1.95
SHCBP1Q8NEM2 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
SHCBP1Q8NEM2 U3.8-201ENST00000363675 217 ntBASIC2.88□□□□□ -1.95
SHCBP1Q8NEM2 Y_RNA.272-201ENST00000364696 102 ntBASIC2.88□□□□□ -1.95
SHCBP1Q8NEM2 RNU6-1130P-201ENST00000365434 107 ntBASIC2.88□□□□□ -1.95
SHCBP1Q8NEM2 Y_RNA.412-201ENST00000384001 104 ntBASIC2.88□□□□□ -1.95
SHCBP1Q8NEM2 SNORA40.19-201ENST00000390846 128 ntBASIC2.88□□□□□ -1.95
SHCBP1Q8NEM2 AL359511.1-201ENST00000402970 211 ntBASIC2.88□□□□□ -1.95
SHCBP1Q8NEM2 SNORD88.1-201ENST00000408684 91 ntBASIC2.88□□□□□ -1.95
SHCBP1Q8NEM2 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.88□□□□□ -1.95
SHCBP1Q8NEM2 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.88□□□□□ -1.95
SHCBP1Q8NEM2 snoU13.15-201ENST00000459407 104 ntBASIC2.88□□□□□ -1.95
SHCBP1Q8NEM2 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.88□□□□□ -1.95
SHCBP1Q8NEM2 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.88□□□□□ -1.95
SHCBP1Q8NEM2 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
SHCBP1Q8NEM2 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.88□□□□□ -1.95
SHCBP1Q8NEM2 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
SHCBP1Q8NEM2 U6.115-201ENST00000636045 103 ntBASIC2.88□□□□□ -1.95
SHCBP1Q8NEM2 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.88□□□□□ -1.95
SHCBP1Q8NEM2 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.88□□□□□ -1.95
SHCBP1Q8NEM2 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.87□□□□□ -1.95
SHCBP1Q8NEM2 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
SHCBP1Q8NEM2 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.87□□□□□ -1.95
SHCBP1Q8NEM2 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
SHCBP1Q8NEM2 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SHCBP1Q8NEM2 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.87□□□□□ -1.95
SHCBP1Q8NEM2 RNU6-1048P-201ENST00000364054 107 ntBASIC2.87□□□□□ -1.95
SHCBP1Q8NEM2 SNORD50.2-201ENST00000365465 70 ntBASIC2.87□□□□□ -1.95
SHCBP1Q8NEM2 Y_RNA.361-201ENST00000365515 120 ntBASIC2.87□□□□□ -1.95
SHCBP1Q8NEM2 RNA5SP425-201ENST00000410336 112 ntBASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 127.4 ms