Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 AC018865.2-201ENST00000423631 129 ntBASIC2.17□□□□□ -2.06
USP38Q8NB14 AL160004.2-201ENST00000432935 350 ntBASIC2.17□□□□□ -2.06
USP38Q8NB14 AC003989.2-201ENST00000440224 169 ntBASIC2.17□□□□□ -2.06
USP38Q8NB14 AL137792.2-201ENST00000443484 235 ntBASIC2.17□□□□□ -2.06
USP38Q8NB14 MRPS17P9-201ENST00000511924 393 ntBASIC2.17□□□□□ -2.06
USP38Q8NB14 AC011406.1-201ENST00000512440 370 ntBASIC2.17□□□□□ -2.06
USP38Q8NB14 RNU4-77P-201ENST00000516692 156 ntBASIC2.17□□□□□ -2.06
USP38Q8NB14 MIR4448-201ENST00000584360 86 ntBASIC2.17□□□□□ -2.06
USP38Q8NB14 AL096840.1-201ENST00000603287 93 ntBASIC2.17□□□□□ -2.06
USP38Q8NB14 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.17□□□□□ -2.06
USP38Q8NB14 AC011476.5-201ENST00000615594 130 ntBASIC2.17□□□□□ -2.06
USP38Q8NB14 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC2.17□□□□□ -2.06
USP38Q8NB14 AL606534.2-204ENST00000635008 178 ntBASIC2.17□□□□□ -2.06
USP38Q8NB14 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.17□□□□□ -2.06
USP38Q8NB14 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
USP38Q8NB14 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
USP38Q8NB14 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.17□□□□□ -2.06
USP38Q8NB14 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.16□□□□□ -2.06
USP38Q8NB14 RNU6-1266P-201ENST00000362794 105 ntBASIC2.16□□□□□ -2.06
USP38Q8NB14 RNU6-862P-201ENST00000362804 105 ntBASIC2.16□□□□□ -2.06
USP38Q8NB14 Y_RNA.138-201ENST00000363462 102 ntBASIC2.16□□□□□ -2.06
USP38Q8NB14 RNU1-115P-201ENST00000365329 160 ntBASIC2.16□□□□□ -2.06
USP38Q8NB14 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
USP38Q8NB14 MIR1185-2-201ENST00000408687 86 ntBASIC2.16□□□□□ -2.06
USP38Q8NB14 RNA5SP501-201ENST00000410990 112 ntBASIC2.16□□□□□ -2.06
USP38Q8NB14 MTCO3P19-201ENST00000415864 321 ntBASIC2.16□□□□□ -2.06
USP38Q8NB14 Y_RNA.639-201ENST00000458981 102 ntBASIC2.16□□□□□ -2.06
USP38Q8NB14 RN7SKP295-201ENST00000517264 153 ntBASIC2.16□□□□□ -2.06
USP38Q8NB14 AC027419.1-201ENST00000522976 328 ntBASIC2.16□□□□□ -2.06
USP38Q8NB14 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.16□□□□□ -2.06
USP38Q8NB14 MIR3683-201ENST00000580847 82 ntBASIC2.16□□□□□ -2.06
USP38Q8NB14 MIR3935-201ENST00000583472 104 ntBASIC2.16□□□□□ -2.06
USP38Q8NB14 AC005786.1-201ENST00000588553 154 ntBASIC2.16□□□□□ -2.06
USP38Q8NB14 RPS29P30-201ENST00000600975 111 ntBASIC2.16□□□□□ -2.06
USP38Q8NB14 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.16□□□□□ -2.06
USP38Q8NB14 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.15□□□□□ -2.06
USP38Q8NB14 Y_RNA.11-201ENST00000362375 109 ntBASIC2.15□□□□□ -2.07
USP38Q8NB14 RNU6-474P-201ENST00000384243 107 ntBASIC2.15□□□□□ -2.07
USP38Q8NB14 RNY3P4-201ENST00000384428 101 ntBASIC2.15□□□□□ -2.07
USP38Q8NB14 SNORD78.2-201ENST00000391076 69 ntBASIC2.15□□□□□ -2.07
USP38Q8NB14 RNA5SP475-201ENST00000410568 110 ntBASIC2.15□□□□□ -2.07
USP38Q8NB14 RNU2-40P-201ENST00000410833 196 ntBASIC2.15□□□□□ -2.07
USP38Q8NB14 ELOCP21-201ENST00000412558 336 ntBASIC2.15□□□□□ -2.07
USP38Q8NB14 AC008134.1-201ENST00000420943 193 ntBASIC2.15□□□□□ -2.07
USP38Q8NB14 AL445685.2-201ENST00000422551 342 ntBASIC2.15□□□□□ -2.07
USP38Q8NB14 MTND1P14-201ENST00000427400 950 ntBASIC2.15□□□□□ -2.07
USP38Q8NB14 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.15□□□□□ -2.07
USP38Q8NB14 FCF1P4-201ENST00000448326 183 ntBASIC2.15□□□□□ -2.07
USP38Q8NB14 NDUFB4P10-201ENST00000452541 359 ntBASIC2.15□□□□□ -2.07
USP38Q8NB14 RNU6-221P-201ENST00000459541 99 ntBASIC2.15□□□□□ -2.07
USP38Q8NB14 Y_RNA.631-201ENST00000459607 101 ntBASIC2.15□□□□□ -2.07
USP38Q8NB14 AC074133.1-201ENST00000515696 183 ntBASIC2.15□□□□□ -2.07
USP38Q8NB14 RNU6-911P-201ENST00000516523 104 ntBASIC2.15□□□□□ -2.07
USP38Q8NB14 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.15□□□□□ -2.07
USP38Q8NB14 MIR5094-201ENST00000578766 85 ntBASIC2.15□□□□□ -2.07
USP38Q8NB14 MIR5188-201ENST00000583467 113 ntBASIC2.15□□□□□ -2.07
USP38Q8NB14 AL109918.3-201ENST00000603072 338 ntBASIC2.15□□□□□ -2.07
USP38Q8NB14 AL138825.1-201ENST00000618587 192 ntBASIC2.15□□□□□ -2.07
USP38Q8NB14 AC091925.1-201ENST00000623204 462 ntBASIC2.15□□□□□ -2.07
USP38Q8NB14 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
USP38Q8NB14 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
USP38Q8NB14 RNY1-201ENST00000364228 113 ntBASIC2.14□□□□□ -2.07
USP38Q8NB14 Y_RNA.395-201ENST00000383945 109 ntBASIC2.14□□□□□ -2.07
USP38Q8NB14 RNU6-417P-201ENST00000384712 107 ntBASIC2.14□□□□□ -2.07
USP38Q8NB14 MIR676-201ENST00000390702 67 ntBASIC2.14□□□□□ -2.07
USP38Q8NB14 AL512604.1-201ENST00000404812 257 ntBASIC2.14□□□□□ -2.07
USP38Q8NB14 MCFD2P1-201ENST00000417812 300 ntBASIC2.14□□□□□ -2.07
USP38Q8NB14 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.14□□□□□ -2.07
USP38Q8NB14 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.14□□□□□ -2.07
USP38Q8NB14 RNVU1-2-201ENST00000516326 135 ntBASIC2.14□□□□□ -2.07
USP38Q8NB14 SNORA25.15-201ENST00000516487 89 ntBASIC2.14□□□□□ -2.07
USP38Q8NB14 AC025647.1-201ENST00000517879 253 ntBASIC2.14□□□□□ -2.07
USP38Q8NB14 DNAJC19P9-201ENST00000555084 351 ntBASIC2.14□□□□□ -2.07
USP38Q8NB14 MIR4659A-201ENST00000580269 81 ntBASIC2.14□□□□□ -2.07
USP38Q8NB14 AC005034.5-201ENST00000604219 466 ntBASIC2.14□□□□□ -2.07
USP38Q8NB14 SNORD58B-201ENST00000607313 66 ntBASIC2.14□□□□□ -2.07
USP38Q8NB14 U1.36-201ENST00000620684 176 ntBASIC2.14□□□□□ -2.07
USP38Q8NB14 AC091812.1-201ENST00000432235 1948 ntBASIC2.13□□□□□ -2.07
USP38Q8NB14 Y_RNA.27-201ENST00000362540 103 ntBASIC2.13□□□□□ -2.07
USP38Q8NB14 Y_RNA.128-201ENST00000363391 112 ntBASIC2.13□□□□□ -2.07
USP38Q8NB14 SNORD114-26-201ENST00000363543 72 ntBASIC2.13□□□□□ -2.07
USP38Q8NB14 RNU1-96P-201ENST00000364163 162 ntBASIC2.13□□□□□ -2.07
USP38Q8NB14 RNU6-1240P-201ENST00000365155 104 ntBASIC2.13□□□□□ -2.07
USP38Q8NB14 RNU6-1264P-201ENST00000383891 107 ntBASIC2.13□□□□□ -2.07
USP38Q8NB14 RNU6-42P-201ENST00000384165 107 ntBASIC2.13□□□□□ -2.07
USP38Q8NB14 AL627390.1-201ENST00000396055 340 ntBASIC2.13□□□□□ -2.07
USP38Q8NB14 RAB28P5-201ENST00000427490 651 ntBASIC2.13□□□□□ -2.07
USP38Q8NB14 TOMM22P2-201ENST00000430735 237 ntBASIC2.13□□□□□ -2.07
USP38Q8NB14 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.13□□□□□ -2.07
USP38Q8NB14 RNU6-1146P-201ENST00000516282 102 ntBASIC2.13□□□□□ -2.07
USP38Q8NB14 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.13□□□□□ -2.07
USP38Q8NB14 RNU6-1153P-201ENST00000516760 105 ntBASIC2.13□□□□□ -2.07
USP38Q8NB14 Y_RNA.701-201ENST00000516812 110 ntBASIC2.13□□□□□ -2.07
USP38Q8NB14 RNU6-988P-201ENST00000519081 107 ntBASIC2.13□□□□□ -2.07
USP38Q8NB14 AC023442.1-201ENST00000531247 422 ntBASIC2.13□□□□□ -2.07
USP38Q8NB14 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.13□□□□□ -2.07
USP38Q8NB14 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.13□□□□□ -2.07
USP38Q8NB14 MIR5089-201ENST00000580047 84 ntBASIC2.13□□□□□ -2.07
USP38Q8NB14 MIR8081-201ENST00000611533 95 ntBASIC2.13□□□□□ -2.07
USP38Q8NB14 AC134503.1-201ENST00000633048 54 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms