Protein–RNA interactions for Protein: Q8NAV1

PRPF38A, Pre-mRNA-splicing factor 38A, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38AQ8NAV1 AC005042.3-201ENST00000453230 174 ntBASIC2.66□□□□□ -1.98
PRPF38AQ8NAV1 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.66□□□□□ -1.98
PRPF38AQ8NAV1 MTND5P22-201ENST00000458380 195 ntBASIC2.66□□□□□ -1.98
PRPF38AQ8NAV1 RNU6-397P-201ENST00000516226 104 ntBASIC2.66□□□□□ -1.98
PRPF38AQ8NAV1 RNU6-1041P-201ENST00000516254 102 ntBASIC2.66□□□□□ -1.98
PRPF38AQ8NAV1 IGKV3-31-201ENST00000523109 329 ntBASIC2.66□□□□□ -1.98
PRPF38AQ8NAV1 AP002001.1-203ENST00000534002 267 ntBASIC2.66□□□□□ -1.98
PRPF38AQ8NAV1 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.66□□□□□ -1.98
PRPF38AQ8NAV1 AL137100.2-201ENST00000555786 315 ntBASIC2.66□□□□□ -1.98
PRPF38AQ8NAV1 MYL12BP1-201ENST00000569826 507 ntBASIC2.66□□□□□ -1.98
PRPF38AQ8NAV1 AC022441.3-201ENST00000605737 136 ntBASIC2.66□□□□□ -1.98
PRPF38AQ8NAV1 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.66□□□□□ -1.98
PRPF38AQ8NAV1 MIR6895-201ENST00000613497 78 ntBASIC2.66□□□□□ -1.98
PRPF38AQ8NAV1 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.66□□□□□ -1.98
PRPF38AQ8NAV1 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
PRPF38AQ8NAV1 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.65□□□□□ -1.98
PRPF38AQ8NAV1 MIR21-201ENST00000362134 72 ntBASIC2.65□□□□□ -1.99
PRPF38AQ8NAV1 RNA5SP276-201ENST00000362580 94 ntBASIC2.65□□□□□ -1.99
PRPF38AQ8NAV1 RNU6-21P-201ENST00000384710 107 ntBASIC2.65□□□□□ -1.99
PRPF38AQ8NAV1 AL355497.1-201ENST00000406262 551 ntBASIC2.65□□□□□ -1.99
PRPF38AQ8NAV1 AC016909.1-201ENST00000415916 166 ntBASIC2.65□□□□□ -1.99
PRPF38AQ8NAV1 AC113618.1-201ENST00000416747 285 ntBASIC2.65□□□□□ -1.99
PRPF38AQ8NAV1 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.65□□□□□ -1.99
PRPF38AQ8NAV1 CST2P1-201ENST00000425770 87 ntBASIC2.65□□□□□ -1.99
PRPF38AQ8NAV1 RPS15AP28-201ENST00000435088 386 ntBASIC2.65□□□□□ -1.99
PRPF38AQ8NAV1 AC018634.1-201ENST00000437554 401 ntBASIC2.65□□□□□ -1.99
PRPF38AQ8NAV1 HMGN2P34-201ENST00000437647 269 ntBASIC2.65□□□□□ -1.99
PRPF38AQ8NAV1 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.65□□□□□ -1.99
PRPF38AQ8NAV1 MRPS35P2-201ENST00000508242 191 ntBASIC2.65□□□□□ -1.99
PRPF38AQ8NAV1 SNORA70.12-201ENST00000516084 153 ntBASIC2.65□□□□□ -1.99
PRPF38AQ8NAV1 RNU7-110P-201ENST00000516891 62 ntBASIC2.65□□□□□ -1.99
PRPF38AQ8NAV1 RNU2-12P-201ENST00000517216 168 ntBASIC2.65□□□□□ -1.99
PRPF38AQ8NAV1 AL360085.1-201ENST00000604713 532 ntBASIC2.65□□□□□ -1.99
PRPF38AQ8NAV1 MIR376A1-201ENST00000616574 68 ntBASIC2.65□□□□□ -1.99
PRPF38AQ8NAV1 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
PRPF38AQ8NAV1 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
PRPF38AQ8NAV1 ZNF702P-202ENST00000434269 1966 ntBASIC2.64□□□□□ -1.99
PRPF38AQ8NAV1 SNORD114-7-201ENST00000362520 77 ntBASIC2.64□□□□□ -1.99
PRPF38AQ8NAV1 Y_RNA.153-201ENST00000363615 91 ntBASIC2.64□□□□□ -1.99
PRPF38AQ8NAV1 RNU6-454P-201ENST00000364292 107 ntBASIC2.64□□□□□ -1.99
PRPF38AQ8NAV1 Y_RNA.243-201ENST00000364481 109 ntBASIC2.64□□□□□ -1.99
PRPF38AQ8NAV1 MIR144-201ENST00000384886 86 ntBASIC2.64□□□□□ -1.99
PRPF38AQ8NAV1 RNA5SP501-201ENST00000410990 112 ntBASIC2.64□□□□□ -1.99
PRPF38AQ8NAV1 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.64□□□□□ -1.99
PRPF38AQ8NAV1 IPO7P1-201ENST00000442031 636 ntBASIC2.64□□□□□ -1.99
PRPF38AQ8NAV1 SNORD65B-201ENST00000459126 73 ntBASIC2.64□□□□□ -1.99
PRPF38AQ8NAV1 SEPT14P8-201ENST00000508026 178 ntBASIC2.64□□□□□ -1.99
PRPF38AQ8NAV1 RNU6-327P-201ENST00000516270 127 ntBASIC2.64□□□□□ -1.99
PRPF38AQ8NAV1 RNU6-1045P-201ENST00000516321 107 ntBASIC2.64□□□□□ -1.99
PRPF38AQ8NAV1 AC008737.2-201ENST00000599446 118 ntBASIC2.64□□□□□ -1.99
PRPF38AQ8NAV1 SNORD113-5-201ENST00000607261 78 ntBASIC2.64□□□□□ -1.99
PRPF38AQ8NAV1 MIR6873-201ENST00000622788 63 ntBASIC2.64□□□□□ -1.99
PRPF38AQ8NAV1 U6.115-201ENST00000636045 103 ntBASIC2.64□□□□□ -1.99
PRPF38AQ8NAV1 AC008555.8-201ENST00000623602 2168 ntBASIC2.64□□□□□ -1.99
PRPF38AQ8NAV1 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.63□□□□□ -1.99
PRPF38AQ8NAV1 RNU6-770P-201ENST00000363929 105 ntBASIC2.63□□□□□ -1.99
PRPF38AQ8NAV1 Y_RNA.446-201ENST00000384178 104 ntBASIC2.63□□□□□ -1.99
PRPF38AQ8NAV1 RNU6-937P-201ENST00000384325 106 ntBASIC2.63□□□□□ -1.99
PRPF38AQ8NAV1 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.63□□□□□ -1.99
PRPF38AQ8NAV1 UBL5P3-201ENST00000475112 231 ntBASIC2.63□□□□□ -1.99
PRPF38AQ8NAV1 AC010655.3-201ENST00000478818 450 ntBASIC2.63□□□□□ -1.99
PRPF38AQ8NAV1 RNU6-155P-201ENST00000516347 100 ntBASIC2.63□□□□□ -1.99
PRPF38AQ8NAV1 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.63□□□□□ -1.99
PRPF38AQ8NAV1 PRR13P7-201ENST00000605538 430 ntBASIC2.63□□□□□ -1.99
PRPF38AQ8NAV1 MIR338-201ENST00000636369 67 ntBASIC2.63□□□□□ -1.99
PRPF38AQ8NAV1 AC005336.3-201ENST00000623833 2679 ntBASIC2.63□□□□□ -1.99
PRPF38AQ8NAV1 CENPCP1-201ENST00000533085 2578 ntBASIC2.62□□□□□ -1.99
PRPF38AQ8NAV1 AL596028.1-201ENST00000326971 197 ntBASIC2.62□□□□□ -1.99
PRPF38AQ8NAV1 Y_RNA.331-201ENST00000365267 102 ntBASIC2.62□□□□□ -1.99
PRPF38AQ8NAV1 SNORA48.1-201ENST00000390879 135 ntBASIC2.62□□□□□ -1.99
PRPF38AQ8NAV1 RNU11-5P-201ENST00000391216 129 ntBASIC2.62□□□□□ -1.99
PRPF38AQ8NAV1 RNY3P15-201ENST00000516297 97 ntBASIC2.62□□□□□ -1.99
PRPF38AQ8NAV1 RNVU1-2-201ENST00000516326 135 ntBASIC2.62□□□□□ -1.99
PRPF38AQ8NAV1 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.62□□□□□ -1.99
PRPF38AQ8NAV1 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC2.62□□□□□ -1.99
PRPF38AQ8NAV1 AC055872.1-201ENST00000570978 278 ntBASIC2.62□□□□□ -1.99
PRPF38AQ8NAV1 AC005828.6-201ENST00000606610 232 ntBASIC2.62□□□□□ -1.99
PRPF38AQ8NAV1 MIR6766-201ENST00000622641 72 ntBASIC2.62□□□□□ -1.99
PRPF38AQ8NAV1 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
PRPF38AQ8NAV1 Y_RNA.101-201ENST00000363154 102 ntBASIC2.61□□□□□ -1.99
PRPF38AQ8NAV1 RNU1-96P-201ENST00000364163 162 ntBASIC2.61□□□□□ -1.99
PRPF38AQ8NAV1 Y_RNA.459-201ENST00000384251 102 ntBASIC2.61□□□□□ -1.99
PRPF38AQ8NAV1 SNORD115-46-201ENST00000390982 71 ntBASIC2.61□□□□□ -1.99
PRPF38AQ8NAV1 MIR873-201ENST00000401120 77 ntBASIC2.61□□□□□ -1.99
PRPF38AQ8NAV1 AL731563.1-201ENST00000442202 214 ntBASIC2.61□□□□□ -1.99
PRPF38AQ8NAV1 RNU6-1046P-201ENST00000516538 107 ntBASIC2.61□□□□□ -1.99
PRPF38AQ8NAV1 AC024995.1-201ENST00000523014 93 ntBASIC2.61□□□□□ -1.99
PRPF38AQ8NAV1 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.61□□□□□ -1.99
PRPF38AQ8NAV1 MIR4287-201ENST00000579398 78 ntBASIC2.61□□□□□ -1.99
PRPF38AQ8NAV1 MIR4300-201ENST00000581016 96 ntBASIC2.61□□□□□ -1.99
PRPF38AQ8NAV1 AC136443.5-201ENST00000603741 370 ntBASIC2.61□□□□□ -1.99
PRPF38AQ8NAV1 AC069114.2-201ENST00000604699 304 ntBASIC2.61□□□□□ -1.99
PRPF38AQ8NAV1 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.61□□□□□ -1.99
PRPF38AQ8NAV1 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.61□□□□□ -1.99
PRPF38AQ8NAV1 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
PRPF38AQ8NAV1 Y_RNA.19-201ENST00000362462 99 ntBASIC2.6□□□□□ -1.99
PRPF38AQ8NAV1 Y_RNA.214-201ENST00000364201 112 ntBASIC2.6□□□□□ -1.99
PRPF38AQ8NAV1 SNORA20B-201ENST00000384220 132 ntBASIC2.6□□□□□ -1.99
PRPF38AQ8NAV1 MIR17-201ENST00000385012 84 ntBASIC2.6□□□□□ -1.99
PRPF38AQ8NAV1 MIR504-201ENST00000385065 83 ntBASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 173.8 ms