Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 RNU6-897P-201ENST00000517135 105 ntBASIC2.35□□□□□ -2.03
CCDC33Q8N5R6 AC016717.2-201ENST00000609089 5141 ntBASIC2.35□□□□□ -2.03
CCDC33Q8N5R6 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.35□□□□□ -2.03
CCDC33Q8N5R6 ZNF720P1-201ENST00000562403 1939 ntBASIC2.34□□□□□ -2.03
CCDC33Q8N5R6 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
CCDC33Q8N5R6 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
CCDC33Q8N5R6 snoU2-30.2-201ENST00000362805 70 ntBASIC2.34□□□□□ -2.03
CCDC33Q8N5R6 Y_RNA.145-201ENST00000363527 102 ntBASIC2.34□□□□□ -2.03
CCDC33Q8N5R6 SNORA72.2-201ENST00000365028 127 ntBASIC2.34□□□□□ -2.03
CCDC33Q8N5R6 RNU2-54P-201ENST00000410299 190 ntBASIC2.34□□□□□ -2.03
CCDC33Q8N5R6 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.34□□□□□ -2.03
CCDC33Q8N5R6 AL591806.2-201ENST00000433122 173 ntBASIC2.34□□□□□ -2.03
CCDC33Q8N5R6 HMGN2P34-201ENST00000437647 269 ntBASIC2.34□□□□□ -2.03
CCDC33Q8N5R6 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.34□□□□□ -2.03
CCDC33Q8N5R6 RNU6-397P-201ENST00000516226 104 ntBASIC2.34□□□□□ -2.03
CCDC33Q8N5R6 RNU6-1041P-201ENST00000516254 102 ntBASIC2.34□□□□□ -2.03
CCDC33Q8N5R6 Y_RNA.720-201ENST00000517166 92 ntBASIC2.34□□□□□ -2.03
CCDC33Q8N5R6 AP005660.1-201ENST00000522972 293 ntBASIC2.34□□□□□ -2.03
CCDC33Q8N5R6 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.34□□□□□ -2.03
CCDC33Q8N5R6 AC136932.1-201ENST00000574771 208 ntBASIC2.34□□□□□ -2.03
CCDC33Q8N5R6 AC078899.2-201ENST00000595282 212 ntBASIC2.34□□□□□ -2.03
CCDC33Q8N5R6 AC022441.3-201ENST00000605737 136 ntBASIC2.34□□□□□ -2.03
CCDC33Q8N5R6 U6.115-201ENST00000636045 103 ntBASIC2.34□□□□□ -2.03
CCDC33Q8N5R6 MIR338-201ENST00000636369 67 ntBASIC2.34□□□□□ -2.03
CCDC33Q8N5R6 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
CCDC33Q8N5R6 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CCDC33Q8N5R6 SNORD114-1-201ENST00000362705 72 ntBASIC2.33□□□□□ -2.04
CCDC33Q8N5R6 Y_RNA.143-201ENST00000363520 106 ntBASIC2.33□□□□□ -2.04
CCDC33Q8N5R6 Y_RNA.243-201ENST00000364481 109 ntBASIC2.33□□□□□ -2.04
CCDC33Q8N5R6 Y_RNA.361-201ENST00000365515 120 ntBASIC2.33□□□□□ -2.04
CCDC33Q8N5R6 RNU5A-5P-201ENST00000411054 116 ntBASIC2.33□□□□□ -2.04
CCDC33Q8N5R6 AL390729.2-201ENST00000416137 156 ntBASIC2.33□□□□□ -2.04
CCDC33Q8N5R6 SNORD65B-201ENST00000459126 73 ntBASIC2.33□□□□□ -2.04
CCDC33Q8N5R6 RNU6-1146P-201ENST00000516282 102 ntBASIC2.33□□□□□ -2.04
CCDC33Q8N5R6 AL360085.1-201ENST00000604713 532 ntBASIC2.33□□□□□ -2.04
CCDC33Q8N5R6 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.33□□□□□ -2.04
CCDC33Q8N5R6 MIR6766-201ENST00000622641 72 ntBASIC2.33□□□□□ -2.04
CCDC33Q8N5R6 AC006435.5-201ENST00000624486 112 ntBASIC2.33□□□□□ -2.04
CCDC33Q8N5R6 AP006437.1-201ENST00000641440 3685 ntBASIC2.32□□□□□ -2.04
CCDC33Q8N5R6 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.32□□□□□ -2.04
CCDC33Q8N5R6 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.32□□□□□ -2.04
CCDC33Q8N5R6 MIRLET7G-201ENST00000362280 84 ntBASIC2.32□□□□□ -2.04
CCDC33Q8N5R6 Y_RNA.152-201ENST00000363578 100 ntBASIC2.32□□□□□ -2.04
CCDC33Q8N5R6 SNORA16B-201ENST00000364674 135 ntBASIC2.32□□□□□ -2.04
CCDC33Q8N5R6 RNU6-1175P-201ENST00000365200 107 ntBASIC2.32□□□□□ -2.04
CCDC33Q8N5R6 RNU6-937P-201ENST00000384325 106 ntBASIC2.32□□□□□ -2.04
CCDC33Q8N5R6 MIR221-201ENST00000385135 110 ntBASIC2.32□□□□□ -2.04
CCDC33Q8N5R6 SNORA48.1-201ENST00000390879 135 ntBASIC2.32□□□□□ -2.04
CCDC33Q8N5R6 RNU6-1199P-201ENST00000411249 104 ntBASIC2.32□□□□□ -2.04
CCDC33Q8N5R6 SUMO1P2-201ENST00000452524 304 ntBASIC2.32□□□□□ -2.04
CCDC33Q8N5R6 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.32□□□□□ -2.04
CCDC33Q8N5R6 RNU6-1046P-201ENST00000516538 107 ntBASIC2.32□□□□□ -2.04
CCDC33Q8N5R6 AC015712.3-201ENST00000559380 164 ntBASIC2.32□□□□□ -2.04
CCDC33Q8N5R6 AC007229.1-201ENST00000590455 412 ntBASIC2.32□□□□□ -2.04
CCDC33Q8N5R6 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.32□□□□□ -2.04
CCDC33Q8N5R6 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
CCDC33Q8N5R6 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CCDC33Q8N5R6 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CCDC33Q8N5R6 AL596028.1-201ENST00000326971 197 ntBASIC2.31□□□□□ -2.04
CCDC33Q8N5R6 SNORD115-30-201ENST00000364117 82 ntBASIC2.31□□□□□ -2.04
CCDC33Q8N5R6 Y_RNA.210-201ENST00000364161 110 ntBASIC2.31□□□□□ -2.04
CCDC33Q8N5R6 Y_RNA.287-201ENST00000364853 94 ntBASIC2.31□□□□□ -2.04
CCDC33Q8N5R6 Y_RNA.446-201ENST00000384178 104 ntBASIC2.31□□□□□ -2.04
CCDC33Q8N5R6 SNORA67.3-201ENST00000384366 140 ntBASIC2.31□□□□□ -2.04
CCDC33Q8N5R6 SNORA64-201ENST00000384674 134 ntBASIC2.31□□□□□ -2.04
CCDC33Q8N5R6 AL355796.1-201ENST00000406706 323 ntBASIC2.31□□□□□ -2.04
CCDC33Q8N5R6 ELOCP20-201ENST00000422460 345 ntBASIC2.31□□□□□ -2.04
CCDC33Q8N5R6 CST2P1-201ENST00000425770 87 ntBASIC2.31□□□□□ -2.04
CCDC33Q8N5R6 AC099677.2-201ENST00000436385 175 ntBASIC2.31□□□□□ -2.04
CCDC33Q8N5R6 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.31□□□□□ -2.04
CCDC33Q8N5R6 snoU13.23-201ENST00000458863 104 ntBASIC2.31□□□□□ -2.04
CCDC33Q8N5R6 MRPS35P2-201ENST00000508242 191 ntBASIC2.31□□□□□ -2.04
CCDC33Q8N5R6 AC010598.1-201ENST00000510378 103 ntBASIC2.31□□□□□ -2.04
CCDC33Q8N5R6 AC025465.3-201ENST00000510570 311 ntBASIC2.31□□□□□ -2.04
CCDC33Q8N5R6 RNU6-966P-201ENST00000516479 104 ntBASIC2.31□□□□□ -2.04
CCDC33Q8N5R6 MIR4300-201ENST00000581016 96 ntBASIC2.31□□□□□ -2.04
CCDC33Q8N5R6 MIR5007-201ENST00000583098 95 ntBASIC2.31□□□□□ -2.04
CCDC33Q8N5R6 MIR376A1-201ENST00000616574 68 ntBASIC2.31□□□□□ -2.04
CCDC33Q8N5R6 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
CCDC33Q8N5R6 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.3□□□□□ -2.04
CCDC33Q8N5R6 Y_RNA.214-201ENST00000364201 112 ntBASIC2.3□□□□□ -2.04
CCDC33Q8N5R6 SNORA20B-201ENST00000384220 132 ntBASIC2.3□□□□□ -2.04
CCDC33Q8N5R6 SNORD115-46-201ENST00000390982 71 ntBASIC2.3□□□□□ -2.04
CCDC33Q8N5R6 RPL21P1-201ENST00000399532 476 ntBASIC2.3□□□□□ -2.04
CCDC33Q8N5R6 MIR1253-201ENST00000408273 105 ntBASIC2.3□□□□□ -2.04
CCDC33Q8N5R6 MIR548F4-201ENST00000408515 105 ntBASIC2.3□□□□□ -2.04
CCDC33Q8N5R6 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.3□□□□□ -2.04
CCDC33Q8N5R6 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.3□□□□□ -2.04
CCDC33Q8N5R6 AC005042.3-201ENST00000453230 174 ntBASIC2.3□□□□□ -2.04
CCDC33Q8N5R6 MTND5P22-201ENST00000458380 195 ntBASIC2.3□□□□□ -2.04
CCDC33Q8N5R6 AC108210.2-201ENST00000503681 201 ntBASIC2.3□□□□□ -2.04
CCDC33Q8N5R6 SNORA40.15-201ENST00000516884 107 ntBASIC2.3□□□□□ -2.04
CCDC33Q8N5R6 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.3□□□□□ -2.04
CCDC33Q8N5R6 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.3□□□□□ -2.04
CCDC33Q8N5R6 AC006380.1-201ENST00000603598 186 ntBASIC2.3□□□□□ -2.04
CCDC33Q8N5R6 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.3□□□□□ -2.04
CCDC33Q8N5R6 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
CCDC33Q8N5R6 RNU6-862P-201ENST00000362804 105 ntBASIC2.29□□□□□ -2.04
CCDC33Q8N5R6 Y_RNA.105-201ENST00000363182 111 ntBASIC2.29□□□□□ -2.04
CCDC33Q8N5R6 Y_RNA.162-201ENST00000363683 102 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms