Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 AL355796.1-201ENST00000406706 323 ntBASIC1.02□□□□□ -2.25
CCDC50Q8IVM0 AL034345.1-201ENST00000407768 123 ntBASIC1.02□□□□□ -2.25
CCDC50Q8IVM0 Y_RNA.595-201ENST00000410403 105 ntBASIC1.02□□□□□ -2.25
CCDC50Q8IVM0 RNU6-1001P-201ENST00000411265 100 ntBASIC1.02□□□□□ -2.25
CCDC50Q8IVM0 MTND1P17-201ENST00000448961 204 ntBASIC1.02□□□□□ -2.25
CCDC50Q8IVM0 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.02□□□□□ -2.25
CCDC50Q8IVM0 APOOP3-201ENST00000536787 586 ntBASIC1.02□□□□□ -2.25
CCDC50Q8IVM0 AC093023.1-201ENST00000547375 507 ntBASIC1.02□□□□□ -2.25
CCDC50Q8IVM0 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.02□□□□□ -2.25
CCDC50Q8IVM0 AL022345.2-201ENST00000606307 135 ntBASIC1.02□□□□□ -2.25
CCDC50Q8IVM0 BX284668.6-201ENST00000606899 438 ntBASIC1.02□□□□□ -2.25
CCDC50Q8IVM0 AL357075.2-201ENST00000614906 189 ntBASIC1.02□□□□□ -2.25
CCDC50Q8IVM0 AC027335.2-201ENST00000624030 375 ntBASIC1.02□□□□□ -2.25
CCDC50Q8IVM0 MTND5P16-201ENST00000460269 1703 ntBASIC1.01□□□□□ -2.25
CCDC50Q8IVM0 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.01□□□□□ -2.25
CCDC50Q8IVM0 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
CCDC50Q8IVM0 MIR660-201ENST00000385235 97 ntBASIC1.01□□□□□ -2.25
CCDC50Q8IVM0 RPL39P28-201ENST00000465655 155 ntBASIC1.01□□□□□ -2.25
CCDC50Q8IVM0 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.01□□□□□ -2.25
CCDC50Q8IVM0 AC018710.1-201ENST00000506509 158 ntBASIC1.01□□□□□ -2.25
CCDC50Q8IVM0 RNU6-1114P-201ENST00000516022 107 ntBASIC1.01□□□□□ -2.25
CCDC50Q8IVM0 Y_RNA.683-201ENST00000516508 93 ntBASIC1.01□□□□□ -2.25
CCDC50Q8IVM0 AC125232.2-201ENST00000592457 143 ntBASIC1.01□□□□□ -2.25
CCDC50Q8IVM0 AC073349.3-201ENST00000617616 186 ntBASIC1.01□□□□□ -2.25
CCDC50Q8IVM0 AL513423.1-201ENST00000621695 132 ntBASIC1.01□□□□□ -2.25
CCDC50Q8IVM0 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.01□□□□□ -2.25
CCDC50Q8IVM0 MIR3662-201ENST00000637030 95 ntBASIC1.01□□□□□ -2.25
CCDC50Q8IVM0 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1□□□□□ -2.25
CCDC50Q8IVM0 SNORD114-27-201ENST00000363766 70 ntBASIC1□□□□□ -2.25
CCDC50Q8IVM0 Y_RNA.318-201ENST00000365131 97 ntBASIC1□□□□□ -2.25
CCDC50Q8IVM0 SNORA20B-201ENST00000384220 132 ntBASIC1□□□□□ -2.25
CCDC50Q8IVM0 Y_RNA.516-201ENST00000384541 124 ntBASIC1□□□□□ -2.25
CCDC50Q8IVM0 SNORD115-47-201ENST00000391226 86 ntBASIC1□□□□□ -2.25
CCDC50Q8IVM0 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
CCDC50Q8IVM0 USP9YP16-201ENST00000430287 407 ntBASIC1□□□□□ -2.25
CCDC50Q8IVM0 CALM2P4-201ENST00000430810 426 ntBASIC1□□□□□ -2.25
CCDC50Q8IVM0 MTND4LP16-201ENST00000440828 295 ntBASIC1□□□□□ -2.25
CCDC50Q8IVM0 USP9YP23-201ENST00000455085 407 ntBASIC1□□□□□ -2.25
CCDC50Q8IVM0 AC048334.1-201ENST00000477975 159 ntBASIC1□□□□□ -2.25
CCDC50Q8IVM0 RPS29P25-201ENST00000481709 171 ntBASIC1□□□□□ -2.25
CCDC50Q8IVM0 RNU4-49P-201ENST00000516080 140 ntBASIC1□□□□□ -2.25
CCDC50Q8IVM0 RNU1-54P-201ENST00000517181 120 ntBASIC1□□□□□ -2.25
CCDC50Q8IVM0 AL359757.2-201ENST00000624309 274 ntBASIC1□□□□□ -2.25
CCDC50Q8IVM0 AL133216.2-202ENST00000634512 349 ntBASIC1□□□□□ -2.25
CCDC50Q8IVM0 MIR6079-201ENST00000635807 62 ntBASIC1□□□□□ -2.25
CCDC50Q8IVM0 RNU6-874P-201ENST00000362390 105 ntBASIC0.99□□□□□ -2.25
CCDC50Q8IVM0 RNU4-76P-201ENST00000364509 141 ntBASIC0.99□□□□□ -2.25
CCDC50Q8IVM0 RNU1-139P-201ENST00000391307 165 ntBASIC0.99□□□□□ -2.25
CCDC50Q8IVM0 ELOCP21-201ENST00000412558 336 ntBASIC0.99□□□□□ -2.25
CCDC50Q8IVM0 USMG5P1-201ENST00000425964 177 ntBASIC0.99□□□□□ -2.25
CCDC50Q8IVM0 AC093850.1-201ENST00000454121 251 ntBASIC0.99□□□□□ -2.25
CCDC50Q8IVM0 SNORD5.1-201ENST00000458800 75 ntBASIC0.99□□□□□ -2.25
CCDC50Q8IVM0 U8.22-201ENST00000459141 133 ntBASIC0.99□□□□□ -2.25
CCDC50Q8IVM0 AC010598.1-201ENST00000510378 103 ntBASIC0.99□□□□□ -2.25
CCDC50Q8IVM0 AC097462.1-201ENST00000514125 324 ntBASIC0.99□□□□□ -2.25
CCDC50Q8IVM0 RNU6-720P-201ENST00000516363 108 ntBASIC0.99□□□□□ -2.25
CCDC50Q8IVM0 Y_RNA.682-201ENST00000516457 100 ntBASIC0.99□□□□□ -2.25
CCDC50Q8IVM0 RNA5SP168-201ENST00000516642 112 ntBASIC0.99□□□□□ -2.25
CCDC50Q8IVM0 Y_RNA.706-201ENST00000516933 99 ntBASIC0.99□□□□□ -2.25
CCDC50Q8IVM0 MIR4790-201ENST00000577799 79 ntBASIC0.99□□□□□ -2.25
CCDC50Q8IVM0 AC080078.2-201ENST00000603766 501 ntBASIC0.99□□□□□ -2.25
CCDC50Q8IVM0 snoU13.31-201ENST00000607291 104 ntBASIC0.99□□□□□ -2.25
CCDC50Q8IVM0 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.99□□□□□ -2.25
CCDC50Q8IVM0 RNA5SP361-201ENST00000362686 118 ntBASIC0.98□□□□□ -2.25
CCDC50Q8IVM0 RNU1-22P-201ENST00000363334 158 ntBASIC0.98□□□□□ -2.25
CCDC50Q8IVM0 MIR329-1-201ENST00000385028 80 ntBASIC0.98□□□□□ -2.25
CCDC50Q8IVM0 SNORD41-201ENST00000386967 70 ntBASIC0.98□□□□□ -2.25
CCDC50Q8IVM0 U8.16-201ENST00000391279 133 ntBASIC0.98□□□□□ -2.25
CCDC50Q8IVM0 AC009161.1-201ENST00000417306 376 ntBASIC0.98□□□□□ -2.25
CCDC50Q8IVM0 RAB28P5-201ENST00000427490 651 ntBASIC0.98□□□□□ -2.25
CCDC50Q8IVM0 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.98□□□□□ -2.25
CCDC50Q8IVM0 AC091021.1-201ENST00000468051 388 ntBASIC0.98□□□□□ -2.25
CCDC50Q8IVM0 AC092989.1-201ENST00000481235 277 ntBASIC0.98□□□□□ -2.25
CCDC50Q8IVM0 AC046134.1-201ENST00000514454 666 ntBASIC0.98□□□□□ -2.25
CCDC50Q8IVM0 SNORA31.2-201ENST00000516019 134 ntBASIC0.98□□□□□ -2.25
CCDC50Q8IVM0 RNU7-172P-201ENST00000517125 64 ntBASIC0.98□□□□□ -2.25
CCDC50Q8IVM0 CYCSP23-201ENST00000519781 313 ntBASIC0.98□□□□□ -2.25
CCDC50Q8IVM0 EIF1P4-201ENST00000572664 335 ntBASIC0.98□□□□□ -2.25
CCDC50Q8IVM0 AC100812.1-201ENST00000607622 580 ntBASIC0.98□□□□□ -2.25
CCDC50Q8IVM0 AC005014.2-201ENST00000607795 599 ntBASIC0.98□□□□□ -2.25
CCDC50Q8IVM0 AC005592.1-201ENST00000566527 1640 ntBASIC0.97□□□□□ -2.25
CCDC50Q8IVM0 Y_RNA.267-201ENST00000364679 109 ntBASIC0.97□□□□□ -2.25
CCDC50Q8IVM0 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
CCDC50Q8IVM0 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.97□□□□□ -2.25
CCDC50Q8IVM0 MIR548F1-201ENST00000408667 84 ntBASIC0.97□□□□□ -2.25
CCDC50Q8IVM0 EIF1P2-201ENST00000428233 350 ntBASIC0.97□□□□□ -2.25
CCDC50Q8IVM0 HSPE1P13-201ENST00000451143 297 ntBASIC0.97□□□□□ -2.25
CCDC50Q8IVM0 RNU7-94P-201ENST00000459576 63 ntBASIC0.97□□□□□ -2.25
CCDC50Q8IVM0 MTND5P5-201ENST00000503764 376 ntBASIC0.97□□□□□ -2.25
CCDC50Q8IVM0 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.97□□□□□ -2.25
CCDC50Q8IVM0 RNU6-917P-201ENST00000516294 104 ntBASIC0.97□□□□□ -2.25
CCDC50Q8IVM0 AP002001.1-203ENST00000534002 267 ntBASIC0.97□□□□□ -2.25
CCDC50Q8IVM0 AL513534.2-201ENST00000603836 250 ntBASIC0.97□□□□□ -2.25
CCDC50Q8IVM0 MIR3688-2-201ENST00000636963 87 ntBASIC0.97□□□□□ -2.25
CCDC50Q8IVM0 Y_RNA.157-201ENST00000363638 102 ntBASIC0.96□□□□□ -2.26
CCDC50Q8IVM0 RNU5F-3P-201ENST00000363767 117 ntBASIC0.96□□□□□ -2.26
CCDC50Q8IVM0 Y_RNA.265-201ENST00000364677 108 ntBASIC0.96□□□□□ -2.26
CCDC50Q8IVM0 RNU6-407P-201ENST00000365280 104 ntBASIC0.96□□□□□ -2.26
CCDC50Q8IVM0 Y_RNA.363-201ENST00000365529 113 ntBASIC0.96□□□□□ -2.26
CCDC50Q8IVM0 RNU6-1013P-201ENST00000384180 107 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms