Protein–RNA interactions for Protein: Q86WB0

ZC3HC1, Nuclear-interacting partner of ALK, humanhuman

Known RBP Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3HC1Q86WB0 HMGN2P39-201ENST00000398005 273 ntBASIC2.04□□□□□ -2.08
ZC3HC1Q86WB0 RNU2-54P-201ENST00000410299 190 ntBASIC2.04□□□□□ -2.08
ZC3HC1Q86WB0 Y_RNA.602-201ENST00000410535 92 ntBASIC2.04□□□□□ -2.08
ZC3HC1Q86WB0 RN7SKP284-201ENST00000411002 343 ntBASIC2.04□□□□□ -2.08
ZC3HC1Q86WB0 AL139156.1-201ENST00000412785 841 ntBASIC2.04□□□□□ -2.08
ZC3HC1Q86WB0 AC016909.1-201ENST00000415916 166 ntBASIC2.04□□□□□ -2.08
ZC3HC1Q86WB0 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC2.04□□□□□ -2.08
ZC3HC1Q86WB0 HMGN2P38-201ENST00000423806 265 ntBASIC2.04□□□□□ -2.08
ZC3HC1Q86WB0 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.04□□□□□ -2.08
ZC3HC1Q86WB0 HMGB3P17-201ENST00000504195 649 ntBASIC2.04□□□□□ -2.08
ZC3HC1Q86WB0 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
ZC3HC1Q86WB0 RNU6-496P-201ENST00000516145 99 ntBASIC2.04□□□□□ -2.08
ZC3HC1Q86WB0 RNU7-110P-201ENST00000516891 62 ntBASIC2.04□□□□□ -2.08
ZC3HC1Q86WB0 AC025647.1-201ENST00000517879 253 ntBASIC2.04□□□□□ -2.08
ZC3HC1Q86WB0 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.04□□□□□ -2.08
ZC3HC1Q86WB0 AL161670.1-201ENST00000554348 137 ntBASIC2.04□□□□□ -2.08
ZC3HC1Q86WB0 MIR4529-201ENST00000578110 78 ntBASIC2.04□□□□□ -2.08
ZC3HC1Q86WB0 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.04□□□□□ -2.08
ZC3HC1Q86WB0 MIR4503-201ENST00000582187 83 ntBASIC2.04□□□□□ -2.08
ZC3HC1Q86WB0 AC078899.2-201ENST00000595282 212 ntBASIC2.04□□□□□ -2.08
ZC3HC1Q86WB0 Y_RNA.376-201ENST00000365638 108 ntBASIC2.03□□□□□ -2.08
ZC3HC1Q86WB0 RNU6-472P-201ENST00000384299 107 ntBASIC2.03□□□□□ -2.08
ZC3HC1Q86WB0 RNU6-463P-201ENST00000384340 107 ntBASIC2.03□□□□□ -2.08
ZC3HC1Q86WB0 RNU6-713P-201ENST00000384761 107 ntBASIC2.03□□□□□ -2.08
ZC3HC1Q86WB0 MT-TW-201ENST00000387382 68 ntBASIC2.03□□□□□ -2.08
ZC3HC1Q86WB0 Y_RNA.581-201ENST00000391017 97 ntBASIC2.03□□□□□ -2.08
ZC3HC1Q86WB0 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.03□□□□□ -2.08
ZC3HC1Q86WB0 AL390729.2-201ENST00000416137 156 ntBASIC2.03□□□□□ -2.08
ZC3HC1Q86WB0 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.03□□□□□ -2.08
ZC3HC1Q86WB0 IPO7P1-201ENST00000442031 636 ntBASIC2.03□□□□□ -2.08
ZC3HC1Q86WB0 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.03□□□□□ -2.08
ZC3HC1Q86WB0 AC245102.2-201ENST00000448956 180 ntBASIC2.03□□□□□ -2.08
ZC3HC1Q86WB0 RPL23AP3-201ENST00000453844 468 ntBASIC2.03□□□□□ -2.08
ZC3HC1Q86WB0 HSPE1P25-201ENST00000455484 251 ntBASIC2.03□□□□□ -2.08
ZC3HC1Q86WB0 SEPT14P8-201ENST00000508026 178 ntBASIC2.03□□□□□ -2.08
ZC3HC1Q86WB0 RNU6-856P-201ENST00000516959 98 ntBASIC2.03□□□□□ -2.08
ZC3HC1Q86WB0 IGKV3-31-201ENST00000523109 329 ntBASIC2.03□□□□□ -2.08
ZC3HC1Q86WB0 SNORD113-5-201ENST00000607261 78 ntBASIC2.03□□□□□ -2.08
ZC3HC1Q86WB0 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.03□□□□□ -2.08
ZC3HC1Q86WB0 MIR6873-201ENST00000622788 63 ntBASIC2.03□□□□□ -2.08
ZC3HC1Q86WB0 U6.115-201ENST00000636045 103 ntBASIC2.03□□□□□ -2.08
ZC3HC1Q86WB0 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
ZC3HC1Q86WB0 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.03□□□□□ -2.09
ZC3HC1Q86WB0 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.02□□□□□ -2.09
ZC3HC1Q86WB0 Y_RNA.84-201ENST00000363011 104 ntBASIC2.02□□□□□ -2.09
ZC3HC1Q86WB0 RNU6-525P-201ENST00000363685 104 ntBASIC2.02□□□□□ -2.09
ZC3HC1Q86WB0 Y_RNA.243-201ENST00000364481 109 ntBASIC2.02□□□□□ -2.09
ZC3HC1Q86WB0 Y_RNA.331-201ENST00000365267 102 ntBASIC2.02□□□□□ -2.09
ZC3HC1Q86WB0 Y_RNA.396-201ENST00000383949 103 ntBASIC2.02□□□□□ -2.09
ZC3HC1Q86WB0 RNU6-196P-201ENST00000384315 107 ntBASIC2.02□□□□□ -2.09
ZC3HC1Q86WB0 Y_RNA.541-201ENST00000384640 113 ntBASIC2.02□□□□□ -2.09
ZC3HC1Q86WB0 MIR29C-201ENST00000385231 88 ntBASIC2.02□□□□□ -2.09
ZC3HC1Q86WB0 AL023284.1-201ENST00000403956 276 ntBASIC2.02□□□□□ -2.09
ZC3HC1Q86WB0 RPL23AP36-201ENST00000413895 458 ntBASIC2.02□□□□□ -2.09
ZC3HC1Q86WB0 AL356320.1-201ENST00000429616 163 ntBASIC2.02□□□□□ -2.09
ZC3HC1Q86WB0 AC005042.3-201ENST00000453230 174 ntBASIC2.02□□□□□ -2.09
ZC3HC1Q86WB0 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.02□□□□□ -2.09
ZC3HC1Q86WB0 RNU6-570P-201ENST00000517051 105 ntBASIC2.02□□□□□ -2.09
ZC3HC1Q86WB0 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.02□□□□□ -2.09
ZC3HC1Q86WB0 AC005828.6-201ENST00000606610 232 ntBASIC2.02□□□□□ -2.09
ZC3HC1Q86WB0 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.02□□□□□ -2.09
ZC3HC1Q86WB0 AL590240.4-201ENST00000616908 390 ntBASIC2.02□□□□□ -2.09
ZC3HC1Q86WB0 7SK.10-201ENST00000621414 298 ntBASIC2.02□□□□□ -2.09
ZC3HC1Q86WB0 AL596028.1-201ENST00000326971 197 ntBASIC2.01□□□□□ -2.09
ZC3HC1Q86WB0 SNORD115-3-201ENST00000363100 82 ntBASIC2.01□□□□□ -2.09
ZC3HC1Q86WB0 SNORD115-30-201ENST00000364117 82 ntBASIC2.01□□□□□ -2.09
ZC3HC1Q86WB0 Y_RNA.483-201ENST00000384380 101 ntBASIC2.01□□□□□ -2.09
ZC3HC1Q86WB0 RNU6-160P-201ENST00000384591 107 ntBASIC2.01□□□□□ -2.09
ZC3HC1Q86WB0 RNU6-21P-201ENST00000384710 107 ntBASIC2.01□□□□□ -2.09
ZC3HC1Q86WB0 RNU6-1203P-201ENST00000410703 110 ntBASIC2.01□□□□□ -2.09
ZC3HC1Q86WB0 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.01□□□□□ -2.09
ZC3HC1Q86WB0 AC060773.1-201ENST00000421698 310 ntBASIC2.01□□□□□ -2.09
ZC3HC1Q86WB0 RNU1-131P-201ENST00000458943 161 ntBASIC2.01□□□□□ -2.09
ZC3HC1Q86WB0 AC055731.1-201ENST00000474387 401 ntBASIC2.01□□□□□ -2.09
ZC3HC1Q86WB0 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.01□□□□□ -2.09
ZC3HC1Q86WB0 RNU6-155P-201ENST00000516347 100 ntBASIC2.01□□□□□ -2.09
ZC3HC1Q86WB0 RNU2-19P-201ENST00000517288 84 ntBASIC2.01□□□□□ -2.09
ZC3HC1Q86WB0 AC007229.1-201ENST00000590455 412 ntBASIC2.01□□□□□ -2.09
ZC3HC1Q86WB0 AC127459.3-201ENST00000624328 466 ntBASIC2.01□□□□□ -2.09
ZC3HC1Q86WB0 RNU4-82P-201ENST00000362443 140 ntBASIC2□□□□□ -2.09
ZC3HC1Q86WB0 RNA5SP493-201ENST00000364115 91 ntBASIC2□□□□□ -2.09
ZC3HC1Q86WB0 SNORA6-201ENST00000384033 151 ntBASIC2□□□□□ -2.09
ZC3HC1Q86WB0 Y_RNA.461-201ENST00000384263 103 ntBASIC2□□□□□ -2.09
ZC3HC1Q86WB0 MIR518A2-201ENST00000384966 87 ntBASIC2□□□□□ -2.09
ZC3HC1Q86WB0 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2□□□□□ -2.09
ZC3HC1Q86WB0 AL355796.1-201ENST00000406706 323 ntBASIC2□□□□□ -2.09
ZC3HC1Q86WB0 U3.40-201ENST00000408706 208 ntBASIC2□□□□□ -2.09
ZC3HC1Q86WB0 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2□□□□□ -2.09
ZC3HC1Q86WB0 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2□□□□□ -2.09
ZC3HC1Q86WB0 SNORD65B-201ENST00000459126 73 ntBASIC2□□□□□ -2.09
ZC3HC1Q86WB0 RNU6-436P-201ENST00000516171 114 ntBASIC2□□□□□ -2.09
ZC3HC1Q86WB0 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2□□□□□ -2.09
ZC3HC1Q86WB0 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2□□□□□ -2.09
ZC3HC1Q86WB0 MIR3169-201ENST00000578032 83 ntBASIC2□□□□□ -2.09
ZC3HC1Q86WB0 MIR4448-201ENST00000584360 86 ntBASIC2□□□□□ -2.09
ZC3HC1Q86WB0 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2□□□□□ -2.09
ZC3HC1Q86WB0 AC008749.1-201ENST00000597650 306 ntBASIC2□□□□□ -2.09
ZC3HC1Q86WB0 U2.15-201ENST00000611544 191 ntBASIC2□□□□□ -2.09
ZC3HC1Q86WB0 U2.16-201ENST00000613119 191 ntBASIC2□□□□□ -2.09
ZC3HC1Q86WB0 U2.12-201ENST00000613778 191 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms