Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 AC092447.9-201ENST00000603395 144 ntBASIC1.76□□□□□ -2.13
LDB1Q86U70 AL080274.1-201ENST00000605565 220 ntBASIC1.76□□□□□ -2.13
LDB1Q86U70 MIR8081-201ENST00000611533 95 ntBASIC1.76□□□□□ -2.13
LDB1Q86U70 AL359075.3-201ENST00000613288 217 ntBASIC1.76□□□□□ -2.13
LDB1Q86U70 MIR4272-201ENST00000635924 64 ntBASIC1.76□□□□□ -2.13
LDB1Q86U70 MIR3674-201ENST00000636576 68 ntBASIC1.76□□□□□ -2.13
LDB1Q86U70 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.76□□□□□ -2.13
LDB1Q86U70 AL356292.1-201ENST00000283110 373 ntBASIC1.75□□□□□ -2.13
LDB1Q86U70 Y_RNA.27-201ENST00000362540 103 ntBASIC1.75□□□□□ -2.13
LDB1Q86U70 Y_RNA.39-201ENST00000362620 98 ntBASIC1.75□□□□□ -2.13
LDB1Q86U70 SNORA33-201ENST00000363664 130 ntBASIC1.75□□□□□ -2.13
LDB1Q86U70 SNORA63D-201ENST00000364359 132 ntBASIC1.75□□□□□ -2.13
LDB1Q86U70 SNORD48-201ENST00000364953 64 ntBASIC1.75□□□□□ -2.13
LDB1Q86U70 RNU1-115P-201ENST00000365329 160 ntBASIC1.75□□□□□ -2.13
LDB1Q86U70 U8.13-201ENST00000390842 128 ntBASIC1.75□□□□□ -2.13
LDB1Q86U70 SNORD78.2-201ENST00000391076 69 ntBASIC1.75□□□□□ -2.13
LDB1Q86U70 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.75□□□□□ -2.13
LDB1Q86U70 AC018865.2-201ENST00000423631 129 ntBASIC1.75□□□□□ -2.13
LDB1Q86U70 CHEK2P4-201ENST00000450340 246 ntBASIC1.75□□□□□ -2.13
LDB1Q86U70 AC112492.4-201ENST00000456549 352 ntBASIC1.75□□□□□ -2.13
LDB1Q86U70 RNU6-408P-201ENST00000515910 100 ntBASIC1.75□□□□□ -2.13
LDB1Q86U70 RNU1-142P-201ENST00000516682 145 ntBASIC1.75□□□□□ -2.13
LDB1Q86U70 GNAI2P1-201ENST00000541815 315 ntBASIC1.75□□□□□ -2.13
LDB1Q86U70 AL138825.1-201ENST00000618587 192 ntBASIC1.75□□□□□ -2.13
LDB1Q86U70 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.75□□□□□ -2.13
LDB1Q86U70 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
LDB1Q86U70 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.74□□□□□ -2.13
LDB1Q86U70 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
LDB1Q86U70 RNU6-926P-201ENST00000384075 107 ntBASIC1.74□□□□□ -2.13
LDB1Q86U70 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
LDB1Q86U70 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.74□□□□□ -2.13
LDB1Q86U70 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.74□□□□□ -2.13
LDB1Q86U70 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
LDB1Q86U70 AC107393.1-201ENST00000512403 346 ntBASIC1.74□□□□□ -2.13
LDB1Q86U70 RNU6-1012P-201ENST00000516606 109 ntBASIC1.74□□□□□ -2.13
LDB1Q86U70 RNA5SP481-201ENST00000516814 122 ntBASIC1.74□□□□□ -2.13
LDB1Q86U70 AL050343.2-201ENST00000607338 280 ntBASIC1.74□□□□□ -2.13
LDB1Q86U70 AC103810.8-201ENST00000607347 118 ntBASIC1.74□□□□□ -2.13
LDB1Q86U70 MIR6845-201ENST00000613182 61 ntBASIC1.74□□□□□ -2.13
LDB1Q86U70 U6.73-201ENST00000619194 103 ntBASIC1.74□□□□□ -2.13
LDB1Q86U70 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
LDB1Q86U70 RNU6-661P-201ENST00000362409 107 ntBASIC1.73□□□□□ -2.13
LDB1Q86U70 Y_RNA.61-201ENST00000362835 102 ntBASIC1.73□□□□□ -2.13
LDB1Q86U70 Y_RNA.419-201ENST00000384041 102 ntBASIC1.73□□□□□ -2.13
LDB1Q86U70 MRPL35P1-201ENST00000404272 572 ntBASIC1.73□□□□□ -2.13
LDB1Q86U70 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.73□□□□□ -2.13
LDB1Q86U70 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.73□□□□□ -2.13
LDB1Q86U70 RPL36AP21-201ENST00000490372 323 ntBASIC1.73□□□□□ -2.13
LDB1Q86U70 AL163195.1-201ENST00000496941 348 ntBASIC1.73□□□□□ -2.13
LDB1Q86U70 HMGN1P13-201ENST00000505795 138 ntBASIC1.73□□□□□ -2.13
LDB1Q86U70 RNU6-295P-201ENST00000516901 104 ntBASIC1.73□□□□□ -2.13
LDB1Q86U70 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.73□□□□□ -2.13
LDB1Q86U70 AP002001.1-203ENST00000534002 267 ntBASIC1.73□□□□□ -2.13
LDB1Q86U70 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.73□□□□□ -2.13
LDB1Q86U70 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.73□□□□□ -2.13
LDB1Q86U70 MIR7843-201ENST00000622274 79 ntBASIC1.73□□□□□ -2.13
LDB1Q86U70 AC084768.2-201ENST00000622736 221 ntBASIC1.73□□□□□ -2.13
LDB1Q86U70 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.73□□□□□ -2.13
LDB1Q86U70 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.73□□□□□ -2.13
LDB1Q86U70 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
LDB1Q86U70 Y_RNA.112-201ENST00000363250 102 ntBASIC1.72□□□□□ -2.13
LDB1Q86U70 RNU6-961P-201ENST00000363893 105 ntBASIC1.72□□□□□ -2.13
LDB1Q86U70 Y_RNA.395-201ENST00000383945 109 ntBASIC1.72□□□□□ -2.13
LDB1Q86U70 SNORA20B-201ENST00000384220 132 ntBASIC1.72□□□□□ -2.13
LDB1Q86U70 Y_RNA.460-201ENST00000384255 102 ntBASIC1.72□□□□□ -2.13
LDB1Q86U70 RNU6-360P-201ENST00000390944 104 ntBASIC1.72□□□□□ -2.13
LDB1Q86U70 RNU6-1186P-201ENST00000410429 97 ntBASIC1.72□□□□□ -2.13
LDB1Q86U70 HSPE1P9-201ENST00000440046 311 ntBASIC1.72□□□□□ -2.13
LDB1Q86U70 RPS27P22-201ENST00000478056 241 ntBASIC1.72□□□□□ -2.13
LDB1Q86U70 RPL26P26-201ENST00000480251 434 ntBASIC1.72□□□□□ -2.13
LDB1Q86U70 AC010469.2-201ENST00000496412 480 ntBASIC1.72□□□□□ -2.13
LDB1Q86U70 SNORA44.1-201ENST00000517031 108 ntBASIC1.72□□□□□ -2.13
LDB1Q86U70 RNA5SP437-201ENST00000517249 129 ntBASIC1.72□□□□□ -2.13
LDB1Q86U70 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.72□□□□□ -2.13
LDB1Q86U70 AC090971.5-201ENST00000621102 293 ntBASIC1.72□□□□□ -2.13
LDB1Q86U70 AL606534.2-204ENST00000635008 178 ntBASIC1.72□□□□□ -2.13
LDB1Q86U70 U6.115-201ENST00000636045 103 ntBASIC1.72□□□□□ -2.13
LDB1Q86U70 ZNF72P-201ENST00000425869 1908 ntBASIC1.72□□□□□ -2.13
LDB1Q86U70 RNU6-454P-201ENST00000364292 107 ntBASIC1.71□□□□□ -2.14
LDB1Q86U70 SNORD42.2-201ENST00000365570 69 ntBASIC1.71□□□□□ -2.14
LDB1Q86U70 RNU6-708P-201ENST00000384217 107 ntBASIC1.71□□□□□ -2.14
LDB1Q86U70 AL355796.1-201ENST00000406706 323 ntBASIC1.71□□□□□ -2.14
LDB1Q86U70 RPL31P63-201ENST00000422565 375 ntBASIC1.71□□□□□ -2.14
LDB1Q86U70 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.71□□□□□ -2.14
LDB1Q86U70 AL137792.2-201ENST00000443484 235 ntBASIC1.71□□□□□ -2.14
LDB1Q86U70 SUMO1P2-201ENST00000452524 304 ntBASIC1.71□□□□□ -2.14
LDB1Q86U70 RPS26P45-201ENST00000471748 340 ntBASIC1.71□□□□□ -2.14
LDB1Q86U70 RNU7-99P-201ENST00000516271 62 ntBASIC1.71□□□□□ -2.14
LDB1Q86U70 SNORA40.14-201ENST00000516543 86 ntBASIC1.71□□□□□ -2.14
LDB1Q86U70 RNU4-77P-201ENST00000516692 156 ntBASIC1.71□□□□□ -2.14
LDB1Q86U70 AC027419.1-201ENST00000522976 328 ntBASIC1.71□□□□□ -2.14
LDB1Q86U70 AC023442.1-201ENST00000531247 422 ntBASIC1.71□□□□□ -2.14
LDB1Q86U70 AC024614.2-201ENST00000577584 372 ntBASIC1.71□□□□□ -2.14
LDB1Q86U70 MIR4659A-201ENST00000580269 81 ntBASIC1.71□□□□□ -2.14
LDB1Q86U70 MIR3618-201ENST00000580330 88 ntBASIC1.71□□□□□ -2.14
LDB1Q86U70 MIR4438-201ENST00000585271 93 ntBASIC1.71□□□□□ -2.14
LDB1Q86U70 uc_338.22-201ENST00000622722 187 ntBASIC1.71□□□□□ -2.14
LDB1Q86U70 AL160413.1-201ENST00000622780 310 ntBASIC1.71□□□□□ -2.14
LDB1Q86U70 AC090574.1-201ENST00000623186 233 ntBASIC1.71□□□□□ -2.14
LDB1Q86U70 U6.92-201ENST00000636464 89 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms