Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.71□□□□□ -2.14
NUP54Q7Z3B4 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
NUP54Q7Z3B4 AC010615.1-201ENST00000594254 1764 ntBASIC1.7□□□□□ -2.14
NUP54Q7Z3B4 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
NUP54Q7Z3B4 RNY3P11-201ENST00000364153 102 ntBASIC1.7□□□□□ -2.14
NUP54Q7Z3B4 RNU1-115P-201ENST00000365329 160 ntBASIC1.7□□□□□ -2.14
NUP54Q7Z3B4 RNU6-296P-201ENST00000384608 107 ntBASIC1.7□□□□□ -2.14
NUP54Q7Z3B4 MIR520A-201ENST00000384862 85 ntBASIC1.7□□□□□ -2.14
NUP54Q7Z3B4 MIR628-201ENST00000385229 95 ntBASIC1.7□□□□□ -2.14
NUP54Q7Z3B4 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.7□□□□□ -2.14
NUP54Q7Z3B4 AC069257.2-201ENST00000441819 155 ntBASIC1.7□□□□□ -2.14
NUP54Q7Z3B4 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.7□□□□□ -2.14
NUP54Q7Z3B4 RPL36AP21-201ENST00000490372 323 ntBASIC1.7□□□□□ -2.14
NUP54Q7Z3B4 RN7SL274P-201ENST00000492268 272 ntBASIC1.7□□□□□ -2.14
NUP54Q7Z3B4 AC024995.1-201ENST00000523014 93 ntBASIC1.7□□□□□ -2.14
NUP54Q7Z3B4 AC084364.2-201ENST00000546924 395 ntBASIC1.7□□□□□ -2.14
NUP54Q7Z3B4 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.7□□□□□ -2.14
NUP54Q7Z3B4 MIR3684-201ENST00000579779 74 ntBASIC1.7□□□□□ -2.14
NUP54Q7Z3B4 VN1R91P-201ENST00000594377 169 ntBASIC1.7□□□□□ -2.14
NUP54Q7Z3B4 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.7□□□□□ -2.14
NUP54Q7Z3B4 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.7□□□□□ -2.14
NUP54Q7Z3B4 Y_RNA.5-201ENST00000362334 102 ntBASIC1.69□□□□□ -2.14
NUP54Q7Z3B4 Y_RNA.197-201ENST00000364004 102 ntBASIC1.69□□□□□ -2.14
NUP54Q7Z3B4 SNORA16.1-201ENST00000364597 132 ntBASIC1.69□□□□□ -2.14
NUP54Q7Z3B4 MIR1267-201ENST00000408723 78 ntBASIC1.69□□□□□ -2.14
NUP54Q7Z3B4 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.69□□□□□ -2.14
NUP54Q7Z3B4 RNU6-1170P-201ENST00000515974 106 ntBASIC1.69□□□□□ -2.14
NUP54Q7Z3B4 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.69□□□□□ -2.14
NUP54Q7Z3B4 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.69□□□□□ -2.14
NUP54Q7Z3B4 AC104985.2-201ENST00000620598 500 ntBASIC1.69□□□□□ -2.14
NUP54Q7Z3B4 AC006435.5-201ENST00000624486 112 ntBASIC1.69□□□□□ -2.14
NUP54Q7Z3B4 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.69□□□□□ -2.14
NUP54Q7Z3B4 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
NUP54Q7Z3B4 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
NUP54Q7Z3B4 SNORA63D-201ENST00000364359 132 ntBASIC1.68□□□□□ -2.14
NUP54Q7Z3B4 RNU6-1310P-201ENST00000384153 107 ntBASIC1.68□□□□□ -2.14
NUP54Q7Z3B4 Y_RNA.496-201ENST00000384444 101 ntBASIC1.68□□□□□ -2.14
NUP54Q7Z3B4 RAB28P5-201ENST00000427490 651 ntBASIC1.68□□□□□ -2.14
NUP54Q7Z3B4 FCF1P4-201ENST00000448326 183 ntBASIC1.68□□□□□ -2.14
NUP54Q7Z3B4 SNORD65B-201ENST00000459126 73 ntBASIC1.68□□□□□ -2.14
NUP54Q7Z3B4 RNU6-295P-201ENST00000516901 104 ntBASIC1.68□□□□□ -2.14
NUP54Q7Z3B4 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
NUP54Q7Z3B4 AL137100.2-201ENST00000555786 315 ntBASIC1.68□□□□□ -2.14
NUP54Q7Z3B4 AL080274.1-201ENST00000605565 220 ntBASIC1.68□□□□□ -2.14
NUP54Q7Z3B4 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.68□□□□□ -2.14
NUP54Q7Z3B4 AL138825.1-201ENST00000618587 192 ntBASIC1.68□□□□□ -2.14
NUP54Q7Z3B4 MIR4272-201ENST00000635924 64 ntBASIC1.68□□□□□ -2.14
NUP54Q7Z3B4 MIR3674-201ENST00000636576 68 ntBASIC1.68□□□□□ -2.14
NUP54Q7Z3B4 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
NUP54Q7Z3B4 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
NUP54Q7Z3B4 Y_RNA.27-201ENST00000362540 103 ntBASIC1.67□□□□□ -2.14
NUP54Q7Z3B4 SNORD78.2-201ENST00000391076 69 ntBASIC1.67□□□□□ -2.14
NUP54Q7Z3B4 RNA5SP467-201ENST00000391274 118 ntBASIC1.67□□□□□ -2.14
NUP54Q7Z3B4 SNORA26.9-201ENST00000391322 122 ntBASIC1.67□□□□□ -2.14
NUP54Q7Z3B4 MIR1289-2-201ENST00000408360 111 ntBASIC1.67□□□□□ -2.14
NUP54Q7Z3B4 RNU2-7P-201ENST00000410794 178 ntBASIC1.67□□□□□ -2.14
NUP54Q7Z3B4 MTCO3P19-201ENST00000415864 321 ntBASIC1.67□□□□□ -2.14
NUP54Q7Z3B4 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.67□□□□□ -2.14
NUP54Q7Z3B4 AC018865.2-201ENST00000423631 129 ntBASIC1.67□□□□□ -2.14
NUP54Q7Z3B4 AC096644.2-201ENST00000429278 159 ntBASIC1.67□□□□□ -2.14
NUP54Q7Z3B4 CHEK2P4-201ENST00000450340 246 ntBASIC1.67□□□□□ -2.14
NUP54Q7Z3B4 AC010598.1-201ENST00000510378 103 ntBASIC1.67□□□□□ -2.14
NUP54Q7Z3B4 Y_RNA.661-201ENST00000516003 99 ntBASIC1.67□□□□□ -2.14
NUP54Q7Z3B4 RNA5SP481-201ENST00000516814 122 ntBASIC1.67□□□□□ -2.14
NUP54Q7Z3B4 AL359075.3-201ENST00000613288 217 ntBASIC1.67□□□□□ -2.14
NUP54Q7Z3B4 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.67□□□□□ -2.14
NUP54Q7Z3B4 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.66□□□□□ -2.14
NUP54Q7Z3B4 Y_RNA.39-201ENST00000362620 98 ntBASIC1.66□□□□□ -2.14
NUP54Q7Z3B4 Y_RNA.112-201ENST00000363250 102 ntBASIC1.66□□□□□ -2.14
NUP54Q7Z3B4 SNORA33-201ENST00000363664 130 ntBASIC1.66□□□□□ -2.14
NUP54Q7Z3B4 Y_RNA.395-201ENST00000383945 109 ntBASIC1.66□□□□□ -2.14
NUP54Q7Z3B4 MIR504-201ENST00000385065 83 ntBASIC1.66□□□□□ -2.14
NUP54Q7Z3B4 RNU6-360P-201ENST00000390944 104 ntBASIC1.66□□□□□ -2.14
NUP54Q7Z3B4 RNA5SP475-201ENST00000410568 110 ntBASIC1.66□□□□□ -2.14
NUP54Q7Z3B4 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.66□□□□□ -2.14
NUP54Q7Z3B4 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.66□□□□□ -2.14
NUP54Q7Z3B4 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.66□□□□□ -2.14
NUP54Q7Z3B4 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.66□□□□□ -2.14
NUP54Q7Z3B4 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.66□□□□□ -2.14
NUP54Q7Z3B4 RPL23AP63-201ENST00000498752 471 ntBASIC1.66□□□□□ -2.14
NUP54Q7Z3B4 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.66□□□□□ -2.14
NUP54Q7Z3B4 RNU6-1012P-201ENST00000516606 109 ntBASIC1.66□□□□□ -2.14
NUP54Q7Z3B4 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.66□□□□□ -2.14
NUP54Q7Z3B4 AP002001.1-203ENST00000534002 267 ntBASIC1.66□□□□□ -2.14
NUP54Q7Z3B4 AC006600.1-201ENST00000572529 153 ntBASIC1.66□□□□□ -2.14
NUP54Q7Z3B4 AC092447.9-201ENST00000603395 144 ntBASIC1.66□□□□□ -2.14
NUP54Q7Z3B4 AL050343.2-201ENST00000607338 280 ntBASIC1.66□□□□□ -2.14
NUP54Q7Z3B4 U6.73-201ENST00000619194 103 ntBASIC1.66□□□□□ -2.14
NUP54Q7Z3B4 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
NUP54Q7Z3B4 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
NUP54Q7Z3B4 Y_RNA.61-201ENST00000362835 102 ntBASIC1.65□□□□□ -2.15
NUP54Q7Z3B4 RNU6-439P-201ENST00000384188 106 ntBASIC1.65□□□□□ -2.15
NUP54Q7Z3B4 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.65□□□□□ -2.15
NUP54Q7Z3B4 RNA5SP323-201ENST00000391094 133 ntBASIC1.65□□□□□ -2.15
NUP54Q7Z3B4 RNU1-78P-201ENST00000391248 165 ntBASIC1.65□□□□□ -2.15
NUP54Q7Z3B4 MRPL35P1-201ENST00000404272 572 ntBASIC1.65□□□□□ -2.15
NUP54Q7Z3B4 AC245517.4-201ENST00000448601 281 ntBASIC1.65□□□□□ -2.15
NUP54Q7Z3B4 RPL26P26-201ENST00000480251 434 ntBASIC1.65□□□□□ -2.15
NUP54Q7Z3B4 RNU6-408P-201ENST00000515910 100 ntBASIC1.65□□□□□ -2.15
NUP54Q7Z3B4 RNU1-142P-201ENST00000516682 145 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 491.5 ms