Protein–RNA interactions for Protein: Q6ZTQ4

CDHR3, Cadherin-related family member 3, humanhuman

Predictions only

Length 885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3Q6ZTQ4 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.72□□□□□ -2.13
CDHR3Q6ZTQ4 AC005592.1-201ENST00000566527 1640 ntBASIC1.71□□□□□ -2.14
CDHR3Q6ZTQ4 RNU6-280P-201ENST00000364145 104 ntBASIC1.71□□□□□ -2.14
CDHR3Q6ZTQ4 SNORA48.1-201ENST00000390879 135 ntBASIC1.71□□□□□ -2.14
CDHR3Q6ZTQ4 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
CDHR3Q6ZTQ4 MRPL42P3-201ENST00000401492 326 ntBASIC1.71□□□□□ -2.14
CDHR3Q6ZTQ4 MIR1302-11-201ENST00000408051 138 ntBASIC1.71□□□□□ -2.14
CDHR3Q6ZTQ4 MIR1302-9-201ENST00000408365 138 ntBASIC1.71□□□□□ -2.14
CDHR3Q6ZTQ4 MIR1302-10-201ENST00000408734 138 ntBASIC1.71□□□□□ -2.14
CDHR3Q6ZTQ4 RNU6-130P-201ENST00000411112 103 ntBASIC1.71□□□□□ -2.14
CDHR3Q6ZTQ4 AC007395.1-201ENST00000451333 677 ntBASIC1.71□□□□□ -2.14
CDHR3Q6ZTQ4 RPL26P26-201ENST00000480251 434 ntBASIC1.71□□□□□ -2.14
CDHR3Q6ZTQ4 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.71□□□□□ -2.14
CDHR3Q6ZTQ4 RN7SKP49-201ENST00000516675 260 ntBASIC1.71□□□□□ -2.14
CDHR3Q6ZTQ4 HSBP1P1-201ENST00000555205 166 ntBASIC1.71□□□□□ -2.14
CDHR3Q6ZTQ4 AC022432.1-201ENST00000595739 310 ntBASIC1.71□□□□□ -2.14
CDHR3Q6ZTQ4 MIR1302-2-201ENST00000607096 138 ntBASIC1.71□□□□□ -2.14
CDHR3Q6ZTQ4 SNORD11B-201ENST00000607707 90 ntBASIC1.71□□□□□ -2.14
CDHR3Q6ZTQ4 MIR8081-201ENST00000611533 95 ntBASIC1.71□□□□□ -2.14
CDHR3Q6ZTQ4 AL021879.1-201ENST00000611756 288 ntBASIC1.71□□□□□ -2.14
CDHR3Q6ZTQ4 PART1_1.1-201ENST00000611761 217 ntBASIC1.71□□□□□ -2.14
CDHR3Q6ZTQ4 AL353997.5-201ENST00000618886 171 ntBASIC1.71□□□□□ -2.14
CDHR3Q6ZTQ4 AC068205.3-201ENST00000636385 468 ntBASIC1.71□□□□□ -2.14
CDHR3Q6ZTQ4 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.71□□□□□ -2.14
CDHR3Q6ZTQ4 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
CDHR3Q6ZTQ4 SNORA33.2-201ENST00000365413 134 ntBASIC1.7□□□□□ -2.14
CDHR3Q6ZTQ4 RNY3P4-201ENST00000384428 101 ntBASIC1.7□□□□□ -2.14
CDHR3Q6ZTQ4 Y_RNA.527-201ENST00000384573 102 ntBASIC1.7□□□□□ -2.14
CDHR3Q6ZTQ4 RNU6-1011P-201ENST00000384668 107 ntBASIC1.7□□□□□ -2.14
CDHR3Q6ZTQ4 MIR628-201ENST00000385229 95 ntBASIC1.7□□□□□ -2.14
CDHR3Q6ZTQ4 AC113618.1-201ENST00000416747 285 ntBASIC1.7□□□□□ -2.14
CDHR3Q6ZTQ4 SNORA40.9-201ENST00000515895 93 ntBASIC1.7□□□□□ -2.14
CDHR3Q6ZTQ4 SNORA25.10-201ENST00000515926 124 ntBASIC1.7□□□□□ -2.14
CDHR3Q6ZTQ4 RNU6-966P-201ENST00000516479 104 ntBASIC1.7□□□□□ -2.14
CDHR3Q6ZTQ4 RNU6-1012P-201ENST00000516606 109 ntBASIC1.7□□□□□ -2.14
CDHR3Q6ZTQ4 RNU6-250P-201ENST00000516958 103 ntBASIC1.7□□□□□ -2.14
CDHR3Q6ZTQ4 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.7□□□□□ -2.14
CDHR3Q6ZTQ4 MIR4680-201ENST00000580906 66 ntBASIC1.7□□□□□ -2.14
CDHR3Q6ZTQ4 RPL17P51-201ENST00000605218 238 ntBASIC1.7□□□□□ -2.14
CDHR3Q6ZTQ4 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.7□□□□□ -2.14
CDHR3Q6ZTQ4 AC022513.1-201ENST00000624512 117 ntBASIC1.7□□□□□ -2.14
CDHR3Q6ZTQ4 AC008873.1-201ENST00000625051 138 ntBASIC1.7□□□□□ -2.14
CDHR3Q6ZTQ4 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.7□□□□□ -2.14
CDHR3Q6ZTQ4 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.7□□□□□ -2.14
CDHR3Q6ZTQ4 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
CDHR3Q6ZTQ4 MIR586-201ENST00000385035 97 ntBASIC1.69□□□□□ -2.14
CDHR3Q6ZTQ4 RNU6-482P-201ENST00000391068 107 ntBASIC1.69□□□□□ -2.14
CDHR3Q6ZTQ4 AL627390.1-201ENST00000396055 340 ntBASIC1.69□□□□□ -2.14
CDHR3Q6ZTQ4 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.69□□□□□ -2.14
CDHR3Q6ZTQ4 RNU1-131P-201ENST00000458943 161 ntBASIC1.69□□□□□ -2.14
CDHR3Q6ZTQ4 HMGB3P17-201ENST00000504195 649 ntBASIC1.69□□□□□ -2.14
CDHR3Q6ZTQ4 RNU6-911P-201ENST00000516523 104 ntBASIC1.69□□□□□ -2.14
CDHR3Q6ZTQ4 RNU6-988P-201ENST00000519081 107 ntBASIC1.69□□□□□ -2.14
CDHR3Q6ZTQ4 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.69□□□□□ -2.14
CDHR3Q6ZTQ4 AC040926.1-201ENST00000530195 238 ntBASIC1.69□□□□□ -2.14
CDHR3Q6ZTQ4 AC018448.1-201ENST00000552843 316 ntBASIC1.69□□□□□ -2.14
CDHR3Q6ZTQ4 MIR4659A-201ENST00000580269 81 ntBASIC1.69□□□□□ -2.14
CDHR3Q6ZTQ4 MIR4713-201ENST00000582691 75 ntBASIC1.69□□□□□ -2.14
CDHR3Q6ZTQ4 AC005786.1-201ENST00000588553 154 ntBASIC1.69□□□□□ -2.14
CDHR3Q6ZTQ4 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.69□□□□□ -2.14
CDHR3Q6ZTQ4 AL353621.2-201ENST00000605340 133 ntBASIC1.69□□□□□ -2.14
CDHR3Q6ZTQ4 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.69□□□□□ -2.14
CDHR3Q6ZTQ4 Y_RNA.27-201ENST00000362540 103 ntBASIC1.68□□□□□ -2.14
CDHR3Q6ZTQ4 RNU1-17P-201ENST00000363022 152 ntBASIC1.68□□□□□ -2.14
CDHR3Q6ZTQ4 Y_RNA.458-201ENST00000384240 102 ntBASIC1.68□□□□□ -2.14
CDHR3Q6ZTQ4 RNU6-975P-201ENST00000384296 105 ntBASIC1.68□□□□□ -2.14
CDHR3Q6ZTQ4 RNU6-823P-201ENST00000391042 103 ntBASIC1.68□□□□□ -2.14
CDHR3Q6ZTQ4 MIR320B2-201ENST00000408479 138 ntBASIC1.68□□□□□ -2.14
CDHR3Q6ZTQ4 Y_RNA.595-201ENST00000410403 105 ntBASIC1.68□□□□□ -2.14
CDHR3Q6ZTQ4 AC016909.1-201ENST00000415916 166 ntBASIC1.68□□□□□ -2.14
CDHR3Q6ZTQ4 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.68□□□□□ -2.14
CDHR3Q6ZTQ4 UQCRBP2-201ENST00000447827 297 ntBASIC1.68□□□□□ -2.14
CDHR3Q6ZTQ4 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.68□□□□□ -2.14
CDHR3Q6ZTQ4 PCNPP5-201ENST00000452246 481 ntBASIC1.68□□□□□ -2.14
CDHR3Q6ZTQ4 RNU7-57P-201ENST00000459540 60 ntBASIC1.68□□□□□ -2.14
CDHR3Q6ZTQ4 RNU6-408P-201ENST00000515910 100 ntBASIC1.68□□□□□ -2.14
CDHR3Q6ZTQ4 SNORA25.15-201ENST00000516487 89 ntBASIC1.68□□□□□ -2.14
CDHR3Q6ZTQ4 SNORA40.14-201ENST00000516543 86 ntBASIC1.68□□□□□ -2.14
CDHR3Q6ZTQ4 GNAI2P1-201ENST00000541815 315 ntBASIC1.68□□□□□ -2.14
CDHR3Q6ZTQ4 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.68□□□□□ -2.14
CDHR3Q6ZTQ4 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.68□□□□□ -2.14
CDHR3Q6ZTQ4 AC240442.1-201ENST00000616055 283 ntBASIC1.68□□□□□ -2.14
CDHR3Q6ZTQ4 AC007742.2-201ENST00000618226 398 ntBASIC1.68□□□□□ -2.14
CDHR3Q6ZTQ4 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
CDHR3Q6ZTQ4 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.68□□□□□ -2.14
CDHR3Q6ZTQ4 Y_RNA.202-201ENST00000364083 110 ntBASIC1.67□□□□□ -2.14
CDHR3Q6ZTQ4 RNU6-454P-201ENST00000364292 107 ntBASIC1.67□□□□□ -2.14
CDHR3Q6ZTQ4 RNU6-57P-201ENST00000411348 103 ntBASIC1.67□□□□□ -2.14
CDHR3Q6ZTQ4 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.67□□□□□ -2.14
CDHR3Q6ZTQ4 AC060773.1-201ENST00000421698 310 ntBASIC1.67□□□□□ -2.14
CDHR3Q6ZTQ4 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.67□□□□□ -2.14
CDHR3Q6ZTQ4 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.67□□□□□ -2.14
CDHR3Q6ZTQ4 SCARNA15.1-201ENST00000516384 125 ntBASIC1.67□□□□□ -2.14
CDHR3Q6ZTQ4 RNU6-107P-201ENST00000516643 102 ntBASIC1.67□□□□□ -2.14
CDHR3Q6ZTQ4 MIR2355-201ENST00000517199 87 ntBASIC1.67□□□□□ -2.14
CDHR3Q6ZTQ4 SUMO2P18-201ENST00000518873 252 ntBASIC1.67□□□□□ -2.14
CDHR3Q6ZTQ4 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.67□□□□□ -2.14
CDHR3Q6ZTQ4 MIR5094-201ENST00000578766 85 ntBASIC1.67□□□□□ -2.14
CDHR3Q6ZTQ4 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.67□□□□□ -2.14
CDHR3Q6ZTQ4 MIR3683-201ENST00000580847 82 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 211.3 ms