Protein–RNA interactions for Protein: Q6STE5

SMARCD3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, humanhuman

Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3Q6STE5 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.85□□□□□ -2.27
SMARCD3Q6STE5 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.85□□□□□ -2.27
SMARCD3Q6STE5 CYP3A52P-201ENST00000563326 91 ntBASIC0.85□□□□□ -2.27
SMARCD3Q6STE5 AC136932.1-201ENST00000574771 208 ntBASIC0.85□□□□□ -2.27
SMARCD3Q6STE5 AC069114.2-201ENST00000604699 304 ntBASIC0.85□□□□□ -2.27
SMARCD3Q6STE5 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.85□□□□□ -2.27
SMARCD3Q6STE5 AC008873.1-201ENST00000625051 138 ntBASIC0.85□□□□□ -2.27
SMARCD3Q6STE5 AL391516.1-201ENST00000554380 2449 ntBASIC0.84□□□□□ -2.27
SMARCD3Q6STE5 snoU2-30.2-201ENST00000362805 70 ntBASIC0.84□□□□□ -2.27
SMARCD3Q6STE5 RNU1-22P-201ENST00000363334 158 ntBASIC0.84□□□□□ -2.27
SMARCD3Q6STE5 SNORA63D-201ENST00000364359 132 ntBASIC0.84□□□□□ -2.27
SMARCD3Q6STE5 RNU6-1019P-201ENST00000364424 107 ntBASIC0.84□□□□□ -2.27
SMARCD3Q6STE5 RNU6-245P-201ENST00000384020 107 ntBASIC0.84□□□□□ -2.27
SMARCD3Q6STE5 RNU6-281P-201ENST00000384212 103 ntBASIC0.84□□□□□ -2.27
SMARCD3Q6STE5 RNU6-601P-201ENST00000384540 107 ntBASIC0.84□□□□□ -2.27
SMARCD3Q6STE5 MIR520A-201ENST00000384862 85 ntBASIC0.84□□□□□ -2.27
SMARCD3Q6STE5 RNU6-360P-201ENST00000390944 104 ntBASIC0.84□□□□□ -2.27
SMARCD3Q6STE5 RNA5SP109-201ENST00000391010 116 ntBASIC0.84□□□□□ -2.27
SMARCD3Q6STE5 MRPL35P1-201ENST00000404272 572 ntBASIC0.84□□□□□ -2.27
SMARCD3Q6STE5 RNU6ATAC25P-201ENST00000408798 117 ntBASIC0.84□□□□□ -2.27
SMARCD3Q6STE5 RNU2-7P-201ENST00000410794 178 ntBASIC0.84□□□□□ -2.27
SMARCD3Q6STE5 AC074085.1-201ENST00000413598 418 ntBASIC0.84□□□□□ -2.27
SMARCD3Q6STE5 AC005002.2-201ENST00000438228 269 ntBASIC0.84□□□□□ -2.27
SMARCD3Q6STE5 PGBD4P5-201ENST00000445958 426 ntBASIC0.84□□□□□ -2.27
SMARCD3Q6STE5 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.84□□□□□ -2.27
SMARCD3Q6STE5 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.84□□□□□ -2.27
SMARCD3Q6STE5 RNU7-87P-201ENST00000459343 62 ntBASIC0.84□□□□□ -2.27
SMARCD3Q6STE5 AC082651.2-201ENST00000496833 166 ntBASIC0.84□□□□□ -2.27
SMARCD3Q6STE5 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC0.84□□□□□ -2.27
SMARCD3Q6STE5 RNU6-1016P-201ENST00000516689 94 ntBASIC0.84□□□□□ -2.27
SMARCD3Q6STE5 RNA5SP404-201ENST00000517118 132 ntBASIC0.84□□□□□ -2.27
SMARCD3Q6STE5 AC091144.1-201ENST00000519573 138 ntBASIC0.84□□□□□ -2.27
SMARCD3Q6STE5 AC134698.4-201ENST00000523451 826 ntBASIC0.84□□□□□ -2.27
SMARCD3Q6STE5 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.84□□□□□ -2.27
SMARCD3Q6STE5 U6atac.1-201ENST00000616025 117 ntBASIC0.84□□□□□ -2.27
SMARCD3Q6STE5 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.84□□□□□ -2.27
SMARCD3Q6STE5 snoZ196.1-201ENST00000625269 89 ntBASIC0.84□□□□□ -2.27
SMARCD3Q6STE5 U6.108-201ENST00000637764 58 ntBASIC0.84□□□□□ -2.27
SMARCD3Q6STE5 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.84□□□□□ -2.27
SMARCD3Q6STE5 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.83□□□□□ -2.28
SMARCD3Q6STE5 RNU6-845P-201ENST00000362578 103 ntBASIC0.83□□□□□ -2.28
SMARCD3Q6STE5 SNORD33-201ENST00000362761 85 ntBASIC0.83□□□□□ -2.28
SMARCD3Q6STE5 SNORD114-27-201ENST00000363766 70 ntBASIC0.83□□□□□ -2.28
SMARCD3Q6STE5 Y_RNA.179-201ENST00000363844 90 ntBASIC0.83□□□□□ -2.28
SMARCD3Q6STE5 Y_RNA.279-201ENST00000364763 95 ntBASIC0.83□□□□□ -2.28
SMARCD3Q6STE5 Y_RNA.390-201ENST00000383932 102 ntBASIC0.83□□□□□ -2.28
SMARCD3Q6STE5 RNU6-767P-201ENST00000384132 107 ntBASIC0.83□□□□□ -2.28
SMARCD3Q6STE5 MIR1253-201ENST00000408273 105 ntBASIC0.83□□□□□ -2.28
SMARCD3Q6STE5 RNU6-1001P-201ENST00000411265 100 ntBASIC0.83□□□□□ -2.28
SMARCD3Q6STE5 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.83□□□□□ -2.28
SMARCD3Q6STE5 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.83□□□□□ -2.28
SMARCD3Q6STE5 AC107399.1-201ENST00000451226 265 ntBASIC0.83□□□□□ -2.28
SMARCD3Q6STE5 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC0.83□□□□□ -2.28
SMARCD3Q6STE5 RNU6-221P-201ENST00000459541 99 ntBASIC0.83□□□□□ -2.28
SMARCD3Q6STE5 AC114982.1-201ENST00000469402 321 ntBASIC0.83□□□□□ -2.28
SMARCD3Q6STE5 COX6CP14-201ENST00000469580 174 ntBASIC0.83□□□□□ -2.28
SMARCD3Q6STE5 RPS23P4-201ENST00000487908 423 ntBASIC0.83□□□□□ -2.28
SMARCD3Q6STE5 HMGN1P7-201ENST00000491722 313 ntBASIC0.83□□□□□ -2.28
SMARCD3Q6STE5 AL163195.1-201ENST00000496941 348 ntBASIC0.83□□□□□ -2.28
SMARCD3Q6STE5 UBL5P1-201ENST00000507979 193 ntBASIC0.83□□□□□ -2.28
SMARCD3Q6STE5 SCARNA16.2-201ENST00000516520 172 ntBASIC0.83□□□□□ -2.28
SMARCD3Q6STE5 RNU2-34P-201ENST00000516534 121 ntBASIC0.83□□□□□ -2.28
SMARCD3Q6STE5 RNU6-1198P-201ENST00000516904 67 ntBASIC0.83□□□□□ -2.28
SMARCD3Q6STE5 AC027419.1-201ENST00000522976 328 ntBASIC0.83□□□□□ -2.28
SMARCD3Q6STE5 AC093023.1-201ENST00000547375 507 ntBASIC0.83□□□□□ -2.28
SMARCD3Q6STE5 AC015688.6-201ENST00000577737 104 ntBASIC0.83□□□□□ -2.28
SMARCD3Q6STE5 MIR5701-3-201ENST00000578890 82 ntBASIC0.83□□□□□ -2.28
SMARCD3Q6STE5 MIR5701-1-201ENST00000585138 82 ntBASIC0.83□□□□□ -2.28
SMARCD3Q6STE5 AC125232.2-201ENST00000592457 143 ntBASIC0.83□□□□□ -2.28
SMARCD3Q6STE5 7SK.7-201ENST00000603504 247 ntBASIC0.83□□□□□ -2.28
SMARCD3Q6STE5 AL353149.1-201ENST00000610667 244 ntBASIC0.83□□□□□ -2.28
SMARCD3Q6STE5 AC010999.1-201ENST00000611856 324 ntBASIC0.83□□□□□ -2.28
SMARCD3Q6STE5 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.83□□□□□ -2.28
SMARCD3Q6STE5 AL357075.2-201ENST00000614906 189 ntBASIC0.83□□□□□ -2.28
SMARCD3Q6STE5 MIR5701-2-201ENST00000615634 82 ntBASIC0.83□□□□□ -2.28
SMARCD3Q6STE5 AC012676.2-201ENST00000619258 186 ntBASIC0.83□□□□□ -2.28
SMARCD3Q6STE5 MIR8065-201ENST00000620577 100 ntBASIC0.83□□□□□ -2.28
SMARCD3Q6STE5 AC099654.5-201ENST00000636479 350 ntBASIC0.83□□□□□ -2.28
SMARCD3Q6STE5 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
SMARCD3Q6STE5 MTND5P35-201ENST00000557537 1720 ntBASIC0.82□□□□□ -2.28
SMARCD3Q6STE5 RNA5SP361-201ENST00000362686 118 ntBASIC0.82□□□□□ -2.28
SMARCD3Q6STE5 Y_RNA.72-201ENST00000362894 103 ntBASIC0.82□□□□□ -2.28
SMARCD3Q6STE5 RNY1P16-201ENST00000363063 111 ntBASIC0.82□□□□□ -2.28
SMARCD3Q6STE5 SNORD81.2-201ENST00000365153 76 ntBASIC0.82□□□□□ -2.28
SMARCD3Q6STE5 RNU6-793P-201ENST00000384233 104 ntBASIC0.82□□□□□ -2.28
SMARCD3Q6STE5 Y_RNA.557-201ENST00000384680 107 ntBASIC0.82□□□□□ -2.28
SMARCD3Q6STE5 SNORA75.4-201ENST00000391278 119 ntBASIC0.82□□□□□ -2.28
SMARCD3Q6STE5 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
SMARCD3Q6STE5 MIR1185-2-201ENST00000408687 86 ntBASIC0.82□□□□□ -2.28
SMARCD3Q6STE5 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.82□□□□□ -2.28
SMARCD3Q6STE5 AL161935.2-201ENST00000414627 60 ntBASIC0.82□□□□□ -2.28
SMARCD3Q6STE5 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.82□□□□□ -2.28
SMARCD3Q6STE5 AC010154.1-201ENST00000425857 269 ntBASIC0.82□□□□□ -2.28
SMARCD3Q6STE5 USP9YP16-201ENST00000430287 407 ntBASIC0.82□□□□□ -2.28
SMARCD3Q6STE5 RPS27P1-201ENST00000450552 247 ntBASIC0.82□□□□□ -2.28
SMARCD3Q6STE5 USP9YP23-201ENST00000455085 407 ntBASIC0.82□□□□□ -2.28
SMARCD3Q6STE5 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.82□□□□□ -2.28
SMARCD3Q6STE5 AC093303.1-201ENST00000514549 295 ntBASIC0.82□□□□□ -2.28
SMARCD3Q6STE5 RNU6-107P-201ENST00000516643 102 ntBASIC0.82□□□□□ -2.28
SMARCD3Q6STE5 Y_RNA.706-201ENST00000516933 99 ntBASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms