Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 Y_RNA.243-201ENST00000364481 109 ntBASIC2.29□□□□□ -2.04
ZNF549Q6P9A3 Y_RNA.308-201ENST00000365043 101 ntBASIC2.29□□□□□ -2.04
ZNF549Q6P9A3 RNU1-138P-201ENST00000384093 164 ntBASIC2.29□□□□□ -2.04
ZNF549Q6P9A3 Y_RNA.506-201ENST00000384494 102 ntBASIC2.29□□□□□ -2.04
ZNF549Q6P9A3 MIR627-201ENST00000384979 97 ntBASIC2.29□□□□□ -2.04
ZNF549Q6P9A3 FO393413.1-201ENST00000402892 195 ntBASIC2.29□□□□□ -2.04
ZNF549Q6P9A3 AC097463.2-201ENST00000421074 142 ntBASIC2.29□□□□□ -2.04
ZNF549Q6P9A3 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.29□□□□□ -2.04
ZNF549Q6P9A3 UBBP3-201ENST00000445497 241 ntBASIC2.29□□□□□ -2.04
ZNF549Q6P9A3 RN7SL636P-201ENST00000497504 294 ntBASIC2.29□□□□□ -2.04
ZNF549Q6P9A3 MRPS36P2-201ENST00000512569 299 ntBASIC2.29□□□□□ -2.04
ZNF549Q6P9A3 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.29□□□□□ -2.04
ZNF549Q6P9A3 SUMO2P18-201ENST00000518873 252 ntBASIC2.29□□□□□ -2.04
ZNF549Q6P9A3 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.29□□□□□ -2.04
ZNF549Q6P9A3 MIR5007-201ENST00000583098 95 ntBASIC2.29□□□□□ -2.04
ZNF549Q6P9A3 MIR3133-201ENST00000583157 78 ntBASIC2.29□□□□□ -2.04
ZNF549Q6P9A3 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.29□□□□□ -2.04
ZNF549Q6P9A3 AC021753.1-201ENST00000635724 168 ntBASIC2.29□□□□□ -2.04
ZNF549Q6P9A3 U6.106-201ENST00000636360 105 ntBASIC2.29□□□□□ -2.04
ZNF549Q6P9A3 U2.22-201ENST00000636441 106 ntBASIC2.29□□□□□ -2.04
ZNF549Q6P9A3 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.29□□□□□ -2.04
ZNF549Q6P9A3 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
ZNF549Q6P9A3 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
ZNF549Q6P9A3 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.28□□□□□ -2.04
ZNF549Q6P9A3 AL359854.1-201ENST00000614203 1594 ntBASIC2.28□□□□□ -2.04
ZNF549Q6P9A3 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
ZNF549Q6P9A3 RNA5SP289-201ENST00000362332 137 ntBASIC2.28□□□□□ -2.04
ZNF549Q6P9A3 Y_RNA.170-201ENST00000363746 110 ntBASIC2.28□□□□□ -2.04
ZNF549Q6P9A3 RNU6-801P-201ENST00000364087 105 ntBASIC2.28□□□□□ -2.04
ZNF549Q6P9A3 SNORA68.1-201ENST00000364537 132 ntBASIC2.28□□□□□ -2.04
ZNF549Q6P9A3 RNU6-1180P-201ENST00000364935 107 ntBASIC2.28□□□□□ -2.04
ZNF549Q6P9A3 RNU6-1328P-201ENST00000410938 106 ntBASIC2.28□□□□□ -2.04
ZNF549Q6P9A3 NDUFB4P10-201ENST00000452541 359 ntBASIC2.28□□□□□ -2.04
ZNF549Q6P9A3 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC2.28□□□□□ -2.04
ZNF549Q6P9A3 RNU6-1219P-201ENST00000516143 112 ntBASIC2.28□□□□□ -2.04
ZNF549Q6P9A3 RNU1-117P-201ENST00000517041 158 ntBASIC2.28□□□□□ -2.04
ZNF549Q6P9A3 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.28□□□□□ -2.04
ZNF549Q6P9A3 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.28□□□□□ -2.04
ZNF549Q6P9A3 MRPS18CP4-201ENST00000535821 231 ntBASIC2.28□□□□□ -2.04
ZNF549Q6P9A3 MIR5692C2-201ENST00000577959 77 ntBASIC2.28□□□□□ -2.04
ZNF549Q6P9A3 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.28□□□□□ -2.04
ZNF549Q6P9A3 CTSLP2-204ENST00000629029 392 ntBASIC2.28□□□□□ -2.04
ZNF549Q6P9A3 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.28□□□□□ -2.04
ZNF549Q6P9A3 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.28□□□□□ -2.05
ZNF549Q6P9A3 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.27□□□□□ -2.05
ZNF549Q6P9A3 MIR548B-201ENST00000385247 97 ntBASIC2.27□□□□□ -2.05
ZNF549Q6P9A3 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.27□□□□□ -2.05
ZNF549Q6P9A3 BTF3P11-201ENST00000426582 477 ntBASIC2.27□□□□□ -2.05
ZNF549Q6P9A3 HMGB3P3-201ENST00000510526 400 ntBASIC2.27□□□□□ -2.05
ZNF549Q6P9A3 Y_RNA.703-201ENST00000516846 111 ntBASIC2.27□□□□□ -2.05
ZNF549Q6P9A3 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.27□□□□□ -2.05
ZNF549Q6P9A3 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.27□□□□□ -2.05
ZNF549Q6P9A3 AC103810.1-201ENST00000579873 453 ntBASIC2.27□□□□□ -2.05
ZNF549Q6P9A3 MIR3910-1-201ENST00000580936 111 ntBASIC2.27□□□□□ -2.05
ZNF549Q6P9A3 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.27□□□□□ -2.05
ZNF549Q6P9A3 RPL30P11-203ENST00000598995 310 ntBASIC2.27□□□□□ -2.05
ZNF549Q6P9A3 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.27□□□□□ -2.05
ZNF549Q6P9A3 MIR6766-201ENST00000622641 72 ntBASIC2.27□□□□□ -2.05
ZNF549Q6P9A3 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.27□□□□□ -2.05
ZNF549Q6P9A3 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
ZNF549Q6P9A3 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.27□□□□□ -2.05
ZNF549Q6P9A3 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
ZNF549Q6P9A3 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.26□□□□□ -2.05
ZNF549Q6P9A3 SNORD56.5-201ENST00000364281 72 ntBASIC2.26□□□□□ -2.05
ZNF549Q6P9A3 Y_RNA.262-201ENST00000364641 102 ntBASIC2.26□□□□□ -2.05
ZNF549Q6P9A3 RNU6-763P-201ENST00000390865 106 ntBASIC2.26□□□□□ -2.05
ZNF549Q6P9A3 AL031003.1-201ENST00000404229 172 ntBASIC2.26□□□□□ -2.05
ZNF549Q6P9A3 RNU6-394P-201ENST00000410735 107 ntBASIC2.26□□□□□ -2.05
ZNF549Q6P9A3 RNU6-1135P-201ENST00000411083 103 ntBASIC2.26□□□□□ -2.05
ZNF549Q6P9A3 AC024067.1-201ENST00000426199 223 ntBASIC2.26□□□□□ -2.05
ZNF549Q6P9A3 TOMM22P2-201ENST00000430735 237 ntBASIC2.26□□□□□ -2.05
ZNF549Q6P9A3 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.26□□□□□ -2.05
ZNF549Q6P9A3 U8.19-201ENST00000459095 133 ntBASIC2.26□□□□□ -2.05
ZNF549Q6P9A3 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.26□□□□□ -2.05
ZNF549Q6P9A3 SNORA31.11-201ENST00000516528 139 ntBASIC2.26□□□□□ -2.05
ZNF549Q6P9A3 RNU6-107P-201ENST00000516643 102 ntBASIC2.26□□□□□ -2.05
ZNF549Q6P9A3 RNU6-1098P-201ENST00000516772 96 ntBASIC2.26□□□□□ -2.05
ZNF549Q6P9A3 HSPE1P18-201ENST00000517602 280 ntBASIC2.26□□□□□ -2.05
ZNF549Q6P9A3 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.26□□□□□ -2.05
ZNF549Q6P9A3 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.26□□□□□ -2.05
ZNF549Q6P9A3 AP005660.1-201ENST00000522972 293 ntBASIC2.26□□□□□ -2.05
ZNF549Q6P9A3 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.26□□□□□ -2.05
ZNF549Q6P9A3 AL078604.3-201ENST00000615580 211 ntBASIC2.26□□□□□ -2.05
ZNF549Q6P9A3 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.26□□□□□ -2.05
ZNF549Q6P9A3 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.26□□□□□ -2.05
ZNF549Q6P9A3 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.26□□□□□ -2.05
ZNF549Q6P9A3 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
ZNF549Q6P9A3 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.25□□□□□ -2.05
ZNF549Q6P9A3 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
ZNF549Q6P9A3 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.25□□□□□ -2.05
ZNF549Q6P9A3 MIRLET7G-201ENST00000362280 84 ntBASIC2.25□□□□□ -2.05
ZNF549Q6P9A3 U3.8-201ENST00000363675 217 ntBASIC2.25□□□□□ -2.05
ZNF549Q6P9A3 MIR586-201ENST00000385035 97 ntBASIC2.25□□□□□ -2.05
ZNF549Q6P9A3 SNORA26.5-201ENST00000391215 123 ntBASIC2.25□□□□□ -2.05
ZNF549Q6P9A3 RNU5E-9P-201ENST00000411164 104 ntBASIC2.25□□□□□ -2.05
ZNF549Q6P9A3 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
ZNF549Q6P9A3 HMGN2P9-201ENST00000476875 229 ntBASIC2.25□□□□□ -2.05
ZNF549Q6P9A3 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.25□□□□□ -2.05
ZNF549Q6P9A3 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.25□□□□□ -2.05
ZNF549Q6P9A3 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 134.5 ms