Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.11□□□□□ -2.23
NIPAL3Q6P499 RNU6-700P-201ENST00000391043 107 ntBASIC1.11□□□□□ -2.23
NIPAL3Q6P499 RNU6-1001P-201ENST00000411265 100 ntBASIC1.11□□□□□ -2.23
NIPAL3Q6P499 RPL37P10-201ENST00000412884 288 ntBASIC1.11□□□□□ -2.23
NIPAL3Q6P499 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.11□□□□□ -2.23
NIPAL3Q6P499 STAG3L5P-204ENST00000443759 179 ntBASIC1.11□□□□□ -2.23
NIPAL3Q6P499 UQCRBP2-201ENST00000447827 297 ntBASIC1.11□□□□□ -2.23
NIPAL3Q6P499 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.11□□□□□ -2.23
NIPAL3Q6P499 AC046134.1-201ENST00000514454 666 ntBASIC1.11□□□□□ -2.23
NIPAL3Q6P499 RN7SKP179-201ENST00000516126 217 ntBASIC1.11□□□□□ -2.23
NIPAL3Q6P499 AC090517.2-201ENST00000614966 680 ntBASIC1.11□□□□□ -2.23
NIPAL3Q6P499 AC106754.2-201ENST00000623006 233 ntBASIC1.11□□□□□ -2.23
NIPAL3Q6P499 MIR6079-201ENST00000635807 62 ntBASIC1.11□□□□□ -2.23
NIPAL3Q6P499 AL391987.6-201ENST00000305671 199 ntBASIC1.1□□□□□ -2.23
NIPAL3Q6P499 RNU4-76P-201ENST00000364509 141 ntBASIC1.1□□□□□ -2.23
NIPAL3Q6P499 MIR660-201ENST00000385235 97 ntBASIC1.1□□□□□ -2.23
NIPAL3Q6P499 RNU6-510P-201ENST00000391239 108 ntBASIC1.1□□□□□ -2.23
NIPAL3Q6P499 MIR190B-201ENST00000401119 79 ntBASIC1.1□□□□□ -2.23
NIPAL3Q6P499 MTCO3P19-201ENST00000415864 321 ntBASIC1.1□□□□□ -2.23
NIPAL3Q6P499 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.1□□□□□ -2.23
NIPAL3Q6P499 RNU7-87P-201ENST00000459343 62 ntBASIC1.1□□□□□ -2.23
NIPAL3Q6P499 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.1□□□□□ -2.23
NIPAL3Q6P499 AC092991.1-201ENST00000477176 376 ntBASIC1.1□□□□□ -2.23
NIPAL3Q6P499 MTND5P5-201ENST00000503764 376 ntBASIC1.1□□□□□ -2.23
NIPAL3Q6P499 RNU7-172P-201ENST00000517125 64 ntBASIC1.1□□□□□ -2.23
NIPAL3Q6P499 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.1□□□□□ -2.23
NIPAL3Q6P499 RPL21P9-201ENST00000556149 474 ntBASIC1.1□□□□□ -2.23
NIPAL3Q6P499 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC1.1□□□□□ -2.23
NIPAL3Q6P499 AC018462.2-201ENST00000605375 395 ntBASIC1.1□□□□□ -2.23
NIPAL3Q6P499 AL050343.2-201ENST00000607338 280 ntBASIC1.1□□□□□ -2.23
NIPAL3Q6P499 Y_RNA.2-201ENST00000362330 96 ntBASIC1.09□□□□□ -2.23
NIPAL3Q6P499 RNU6-1264P-201ENST00000383891 107 ntBASIC1.09□□□□□ -2.23
NIPAL3Q6P499 SNORD116-4-201ENST00000384733 96 ntBASIC1.09□□□□□ -2.23
NIPAL3Q6P499 MTCYBP4-201ENST00000401524 249 ntBASIC1.09□□□□□ -2.23
NIPAL3Q6P499 AC097462.1-201ENST00000514125 324 ntBASIC1.09□□□□□ -2.23
NIPAL3Q6P499 RNU6-1016P-201ENST00000516689 94 ntBASIC1.09□□□□□ -2.23
NIPAL3Q6P499 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.09□□□□□ -2.23
NIPAL3Q6P499 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.09□□□□□ -2.23
NIPAL3Q6P499 MIR3684-201ENST00000579779 74 ntBASIC1.09□□□□□ -2.23
NIPAL3Q6P499 AC018638.8-201ENST00000588755 281 ntBASIC1.09□□□□□ -2.23
NIPAL3Q6P499 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.09□□□□□ -2.23
NIPAL3Q6P499 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.09□□□□□ -2.24
NIPAL3Q6P499 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
NIPAL3Q6P499 Y_RNA.265-201ENST00000364677 108 ntBASIC1.08□□□□□ -2.24
NIPAL3Q6P499 Y_RNA.364-201ENST00000365532 101 ntBASIC1.08□□□□□ -2.24
NIPAL3Q6P499 SNORA20B-201ENST00000384220 132 ntBASIC1.08□□□□□ -2.24
NIPAL3Q6P499 RNU6-505P-201ENST00000384427 107 ntBASIC1.08□□□□□ -2.24
NIPAL3Q6P499 SNORA12.1-201ENST00000390873 148 ntBASIC1.08□□□□□ -2.24
NIPAL3Q6P499 MIR1285-1-201ENST00000408593 84 ntBASIC1.08□□□□□ -2.24
NIPAL3Q6P499 MIR548F1-201ENST00000408667 84 ntBASIC1.08□□□□□ -2.24
NIPAL3Q6P499 AC074085.1-201ENST00000413598 418 ntBASIC1.08□□□□□ -2.24
NIPAL3Q6P499 EIF1P2-201ENST00000428233 350 ntBASIC1.08□□□□□ -2.24
NIPAL3Q6P499 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.08□□□□□ -2.24
NIPAL3Q6P499 UBE2V1P7-201ENST00000446395 340 ntBASIC1.08□□□□□ -2.24
NIPAL3Q6P499 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.08□□□□□ -2.24
NIPAL3Q6P499 RNU6-329P-201ENST00000459618 107 ntBASIC1.08□□□□□ -2.24
NIPAL3Q6P499 AL163540.1-201ENST00000485382 386 ntBASIC1.08□□□□□ -2.24
NIPAL3Q6P499 AC018710.1-201ENST00000506509 158 ntBASIC1.08□□□□□ -2.24
NIPAL3Q6P499 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC1.08□□□□□ -2.24
NIPAL3Q6P499 RNU6-922P-201ENST00000516753 99 ntBASIC1.08□□□□□ -2.24
NIPAL3Q6P499 RNU2-56P-201ENST00000516826 190 ntBASIC1.08□□□□□ -2.24
NIPAL3Q6P499 MIR4778-201ENST00000577635 80 ntBASIC1.08□□□□□ -2.24
NIPAL3Q6P499 MIR5701-3-201ENST00000578890 82 ntBASIC1.08□□□□□ -2.24
NIPAL3Q6P499 MIR5701-1-201ENST00000585138 82 ntBASIC1.08□□□□□ -2.24
NIPAL3Q6P499 AC125232.2-201ENST00000592457 143 ntBASIC1.08□□□□□ -2.24
NIPAL3Q6P499 AL513534.2-201ENST00000603836 250 ntBASIC1.08□□□□□ -2.24
NIPAL3Q6P499 AC093783.1-201ENST00000612976 329 ntBASIC1.08□□□□□ -2.24
NIPAL3Q6P499 MIR5701-2-201ENST00000615634 82 ntBASIC1.08□□□□□ -2.24
NIPAL3Q6P499 AC073544.1-201ENST00000600110 1595 ntBASIC1.08□□□□□ -2.24
NIPAL3Q6P499 RNU1-22P-201ENST00000363334 158 ntBASIC1.07□□□□□ -2.24
NIPAL3Q6P499 RNU6-879P-201ENST00000364328 108 ntBASIC1.07□□□□□ -2.24
NIPAL3Q6P499 RNU6-593P-201ENST00000364716 112 ntBASIC1.07□□□□□ -2.24
NIPAL3Q6P499 RNU6-407P-201ENST00000365280 104 ntBASIC1.07□□□□□ -2.24
NIPAL3Q6P499 SNORA25-201ENST00000384384 134 ntBASIC1.07□□□□□ -2.24
NIPAL3Q6P499 MIR562-201ENST00000384894 95 ntBASIC1.07□□□□□ -2.24
NIPAL3Q6P499 MIR222-201ENST00000384992 110 ntBASIC1.07□□□□□ -2.24
NIPAL3Q6P499 MIR329-1-201ENST00000385028 80 ntBASIC1.07□□□□□ -2.24
NIPAL3Q6P499 MTCYBP10-201ENST00000424905 650 ntBASIC1.07□□□□□ -2.24
NIPAL3Q6P499 DYNLT3P2-201ENST00000442517 295 ntBASIC1.07□□□□□ -2.24
NIPAL3Q6P499 AC026782.1-201ENST00000512952 449 ntBASIC1.07□□□□□ -2.24
NIPAL3Q6P499 RNU6-718P-201ENST00000516166 105 ntBASIC1.07□□□□□ -2.24
NIPAL3Q6P499 RNU6-165P-201ENST00000517170 99 ntBASIC1.07□□□□□ -2.24
NIPAL3Q6P499 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.07□□□□□ -2.24
NIPAL3Q6P499 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.07□□□□□ -2.24
NIPAL3Q6P499 BX284668.6-201ENST00000606899 438 ntBASIC1.07□□□□□ -2.24
NIPAL3Q6P499 snoU13.31-201ENST00000607291 104 ntBASIC1.07□□□□□ -2.24
NIPAL3Q6P499 AC005014.2-201ENST00000607795 599 ntBASIC1.07□□□□□ -2.24
NIPAL3Q6P499 MIR6078-201ENST00000611069 100 ntBASIC1.07□□□□□ -2.24
NIPAL3Q6P499 RNA5SP432-201ENST00000362480 116 ntBASIC1.06□□□□□ -2.24
NIPAL3Q6P499 RNU6-199P-201ENST00000362954 107 ntBASIC1.06□□□□□ -2.24
NIPAL3Q6P499 Y_RNA.86-201ENST00000363020 111 ntBASIC1.06□□□□□ -2.24
NIPAL3Q6P499 Y_RNA.473-201ENST00000384333 102 ntBASIC1.06□□□□□ -2.24
NIPAL3Q6P499 AL355796.1-201ENST00000406706 323 ntBASIC1.06□□□□□ -2.24
NIPAL3Q6P499 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.06□□□□□ -2.24
NIPAL3Q6P499 MIR1277-201ENST00000408536 78 ntBASIC1.06□□□□□ -2.24
NIPAL3Q6P499 Y_RNA.594-201ENST00000410373 140 ntBASIC1.06□□□□□ -2.24
NIPAL3Q6P499 AL591704.2-201ENST00000421658 181 ntBASIC1.06□□□□□ -2.24
NIPAL3Q6P499 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.06□□□□□ -2.24
NIPAL3Q6P499 RPS3AP52-201ENST00000435639 297 ntBASIC1.06□□□□□ -2.24
NIPAL3Q6P499 HSPE1P13-201ENST00000451143 297 ntBASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms