Protein–RNA interactions for Protein: Q6NUI1

CCDC144NL, Putative coiled-coil domain-containing protein 144 N-terminal-like, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NLQ6NUI1 RPS27P22-201ENST00000478056 241 ntBASIC2.19□□□□□ -2.06
CCDC144NLQ6NUI1 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.19□□□□□ -2.06
CCDC144NLQ6NUI1 AC096725.1-201ENST00000514266 313 ntBASIC2.19□□□□□ -2.06
CCDC144NLQ6NUI1 RNA5SP20-201ENST00000515976 84 ntBASIC2.19□□□□□ -2.06
CCDC144NLQ6NUI1 RNA5SP82-201ENST00000516707 92 ntBASIC2.19□□□□□ -2.06
CCDC144NLQ6NUI1 AP005660.1-201ENST00000522972 293 ntBASIC2.19□□□□□ -2.06
CCDC144NLQ6NUI1 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC2.19□□□□□ -2.06
CCDC144NLQ6NUI1 AL137100.2-201ENST00000555786 315 ntBASIC2.19□□□□□ -2.06
CCDC144NLQ6NUI1 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.19□□□□□ -2.06
CCDC144NLQ6NUI1 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.19□□□□□ -2.06
CCDC144NLQ6NUI1 AC245884.12-201ENST00000615364 59 ntBASIC2.19□□□□□ -2.06
CCDC144NLQ6NUI1 CENPCP1-201ENST00000533085 2578 ntBASIC2.18□□□□□ -2.06
CCDC144NLQ6NUI1 ZNF271P-202ENST00000465539 1970 ntBASIC2.18□□□□□ -2.06
CCDC144NLQ6NUI1 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
CCDC144NLQ6NUI1 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.18□□□□□ -2.06
CCDC144NLQ6NUI1 Y_RNA.14-201ENST00000362415 103 ntBASIC2.18□□□□□ -2.06
CCDC144NLQ6NUI1 Y_RNA.111-201ENST00000363248 100 ntBASIC2.18□□□□□ -2.06
CCDC144NLQ6NUI1 SNORA25.6-201ENST00000364121 118 ntBASIC2.18□□□□□ -2.06
CCDC144NLQ6NUI1 RNU6-514P-201ENST00000384208 107 ntBASIC2.18□□□□□ -2.06
CCDC144NLQ6NUI1 AL117342.1-201ENST00000404861 406 ntBASIC2.18□□□□□ -2.06
CCDC144NLQ6NUI1 RNU6-710P-201ENST00000410424 105 ntBASIC2.18□□□□□ -2.06
CCDC144NLQ6NUI1 AC063976.3-201ENST00000426849 329 ntBASIC2.18□□□□□ -2.06
CCDC144NLQ6NUI1 RPS29P6-201ENST00000438196 145 ntBASIC2.18□□□□□ -2.06
CCDC144NLQ6NUI1 YWHAEP4-201ENST00000505390 198 ntBASIC2.18□□□□□ -2.06
CCDC144NLQ6NUI1 RNU7-193P-201ENST00000516723 65 ntBASIC2.18□□□□□ -2.06
CCDC144NLQ6NUI1 SNORA31.25-201ENST00000517242 134 ntBASIC2.18□□□□□ -2.06
CCDC144NLQ6NUI1 GTF3AP2-201ENST00000557014 266 ntBASIC2.18□□□□□ -2.06
CCDC144NLQ6NUI1 AC005786.1-201ENST00000588553 154 ntBASIC2.18□□□□□ -2.06
CCDC144NLQ6NUI1 AC012433.1-201ENST00000588916 398 ntBASIC2.18□□□□□ -2.06
CCDC144NLQ6NUI1 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.17□□□□□ -2.06
CCDC144NLQ6NUI1 RNU6-862P-201ENST00000362804 105 ntBASIC2.17□□□□□ -2.06
CCDC144NLQ6NUI1 SNORA80A-201ENST00000363922 136 ntBASIC2.17□□□□□ -2.06
CCDC144NLQ6NUI1 MIR597-201ENST00000384968 97 ntBASIC2.17□□□□□ -2.06
CCDC144NLQ6NUI1 RNU6-1248P-201ENST00000391096 64 ntBASIC2.17□□□□□ -2.06
CCDC144NLQ6NUI1 RNA5SP465-201ENST00000391195 109 ntBASIC2.17□□□□□ -2.06
CCDC144NLQ6NUI1 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.17□□□□□ -2.06
CCDC144NLQ6NUI1 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.17□□□□□ -2.06
CCDC144NLQ6NUI1 HMGN2P3-201ENST00000433603 273 ntBASIC2.17□□□□□ -2.06
CCDC144NLQ6NUI1 HMGN2P5-201ENST00000436882 273 ntBASIC2.17□□□□□ -2.06
CCDC144NLQ6NUI1 RPL39P38-201ENST00000467018 153 ntBASIC2.17□□□□□ -2.06
CCDC144NLQ6NUI1 RPS26P55-201ENST00000471178 356 ntBASIC2.17□□□□□ -2.06
CCDC144NLQ6NUI1 MIR4438-201ENST00000585271 93 ntBASIC2.17□□□□□ -2.06
CCDC144NLQ6NUI1 U6.73-201ENST00000619194 103 ntBASIC2.17□□□□□ -2.06
CCDC144NLQ6NUI1 AC022513.1-201ENST00000624512 117 ntBASIC2.17□□□□□ -2.06
CCDC144NLQ6NUI1 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CCDC144NLQ6NUI1 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CCDC144NLQ6NUI1 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
CCDC144NLQ6NUI1 SNORA5B-201ENST00000363786 132 ntBASIC2.16□□□□□ -2.06
CCDC144NLQ6NUI1 Y_RNA.350-201ENST00000365409 98 ntBASIC2.16□□□□□ -2.06
CCDC144NLQ6NUI1 Y_RNA.562-201ENST00000384695 113 ntBASIC2.16□□□□□ -2.06
CCDC144NLQ6NUI1 Y_RNA.618-201ENST00000410949 107 ntBASIC2.16□□□□□ -2.06
CCDC144NLQ6NUI1 AC011753.1-201ENST00000451001 220 ntBASIC2.16□□□□□ -2.06
CCDC144NLQ6NUI1 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.16□□□□□ -2.06
CCDC144NLQ6NUI1 AC091959.1-201ENST00000495857 238 ntBASIC2.16□□□□□ -2.06
CCDC144NLQ6NUI1 RNU6-191P-201ENST00000516295 94 ntBASIC2.16□□□□□ -2.06
CCDC144NLQ6NUI1 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.16□□□□□ -2.06
CCDC144NLQ6NUI1 RPL21P9-201ENST00000556149 474 ntBASIC2.16□□□□□ -2.06
CCDC144NLQ6NUI1 MIR4635-201ENST00000583759 79 ntBASIC2.16□□□□□ -2.06
CCDC144NLQ6NUI1 AL512605.2-201ENST00000592972 256 ntBASIC2.16□□□□□ -2.06
CCDC144NLQ6NUI1 AL033523.1-201ENST00000605153 153 ntBASIC2.16□□□□□ -2.06
CCDC144NLQ6NUI1 SCARNA15.3-201ENST00000626315 122 ntBASIC2.16□□□□□ -2.06
CCDC144NLQ6NUI1 SCARNA4.1-201ENST00000628597 123 ntBASIC2.16□□□□□ -2.06
CCDC144NLQ6NUI1 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CCDC144NLQ6NUI1 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.16□□□□□ -2.06
CCDC144NLQ6NUI1 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CCDC144NLQ6NUI1 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
CCDC144NLQ6NUI1 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.16□□□□□ -2.06
CCDC144NLQ6NUI1 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.15□□□□□ -2.07
CCDC144NLQ6NUI1 Y_RNA.307-201ENST00000365022 117 ntBASIC2.15□□□□□ -2.07
CCDC144NLQ6NUI1 MIR524-201ENST00000385242 87 ntBASIC2.15□□□□□ -2.07
CCDC144NLQ6NUI1 RNA5SP184-201ENST00000411071 108 ntBASIC2.15□□□□□ -2.07
CCDC144NLQ6NUI1 AC010154.1-201ENST00000425857 269 ntBASIC2.15□□□□□ -2.07
CCDC144NLQ6NUI1 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.15□□□□□ -2.07
CCDC144NLQ6NUI1 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.15□□□□□ -2.07
CCDC144NLQ6NUI1 AC099677.2-201ENST00000436385 175 ntBASIC2.15□□□□□ -2.07
CCDC144NLQ6NUI1 HSPE1P13-201ENST00000451143 297 ntBASIC2.15□□□□□ -2.07
CCDC144NLQ6NUI1 SNORD109B-201ENST00000458961 67 ntBASIC2.15□□□□□ -2.07
CCDC144NLQ6NUI1 SNORD109A-201ENST00000459128 67 ntBASIC2.15□□□□□ -2.07
CCDC144NLQ6NUI1 AC010409.1-201ENST00000487382 476 ntBASIC2.15□□□□□ -2.07
CCDC144NLQ6NUI1 RNU6-1337P-201ENST00000516525 95 ntBASIC2.15□□□□□ -2.07
CCDC144NLQ6NUI1 MIR4529-201ENST00000578110 78 ntBASIC2.15□□□□□ -2.07
CCDC144NLQ6NUI1 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.15□□□□□ -2.07
CCDC144NLQ6NUI1 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
CCDC144NLQ6NUI1 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.14□□□□□ -2.07
CCDC144NLQ6NUI1 Y_RNA.44-201ENST00000362676 108 ntBASIC2.14□□□□□ -2.07
CCDC144NLQ6NUI1 RNU1-22P-201ENST00000363334 158 ntBASIC2.14□□□□□ -2.07
CCDC144NLQ6NUI1 RNU1-96P-201ENST00000364163 162 ntBASIC2.14□□□□□ -2.07
CCDC144NLQ6NUI1 Y_RNA.352-201ENST00000365439 102 ntBASIC2.14□□□□□ -2.07
CCDC144NLQ6NUI1 RNA5SP467-201ENST00000391274 118 ntBASIC2.14□□□□□ -2.07
CCDC144NLQ6NUI1 RNU6-855P-201ENST00000410395 104 ntBASIC2.14□□□□□ -2.07
CCDC144NLQ6NUI1 RNU6-1186P-201ENST00000410429 97 ntBASIC2.14□□□□□ -2.07
CCDC144NLQ6NUI1 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.14□□□□□ -2.07
CCDC144NLQ6NUI1 CST2P1-201ENST00000425770 87 ntBASIC2.14□□□□□ -2.07
CCDC144NLQ6NUI1 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.14□□□□□ -2.07
CCDC144NLQ6NUI1 SNORA59A-201ENST00000459326 152 ntBASIC2.14□□□□□ -2.07
CCDC144NLQ6NUI1 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.14□□□□□ -2.07
CCDC144NLQ6NUI1 HMGB3P3-201ENST00000510526 400 ntBASIC2.14□□□□□ -2.07
CCDC144NLQ6NUI1 AC097462.1-201ENST00000514125 324 ntBASIC2.14□□□□□ -2.07
CCDC144NLQ6NUI1 RNA5SP282-201ENST00000516355 108 ntBASIC2.14□□□□□ -2.07
CCDC144NLQ6NUI1 SNORA31.11-201ENST00000516528 139 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms