Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 RNU6-412P-201ENST00000516434 106 ntBASIC3.47□□□□□ -1.85
RNF43Q68DV7 AC012531.5-201ENST00000611375 151 ntBASIC3.47□□□□□ -1.85
RNF43Q68DV7 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.47□□□□□ -1.85
RNF43Q68DV7 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.47□□□□□ -1.85
RNF43Q68DV7 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
RNF43Q68DV7 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
RNF43Q68DV7 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
RNF43Q68DV7 Z83843.1-201ENST00000604070 3685 ntBASIC3.46□□□□□ -1.86
RNF43Q68DV7 SNORA27.1-201ENST00000362604 124 ntBASIC3.46□□□□□ -1.86
RNF43Q68DV7 RNU6-1107P-201ENST00000364817 104 ntBASIC3.46□□□□□ -1.86
RNF43Q68DV7 RNU6-301P-201ENST00000384277 107 ntBASIC3.46□□□□□ -1.86
RNF43Q68DV7 RNU6-748P-201ENST00000384648 107 ntBASIC3.46□□□□□ -1.86
RNF43Q68DV7 MIR586-201ENST00000385035 97 ntBASIC3.46□□□□□ -1.86
RNF43Q68DV7 RNA5SP129-201ENST00000410276 118 ntBASIC3.46□□□□□ -1.86
RNF43Q68DV7 AC023141.4-201ENST00000412031 328 ntBASIC3.46□□□□□ -1.86
RNF43Q68DV7 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.46□□□□□ -1.86
RNF43Q68DV7 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.46□□□□□ -1.86
RNF43Q68DV7 RPL36AP21-201ENST00000490372 323 ntBASIC3.46□□□□□ -1.86
RNF43Q68DV7 AC092185.1-201ENST00000491371 97 ntBASIC3.46□□□□□ -1.86
RNF43Q68DV7 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.46□□□□□ -1.86
RNF43Q68DV7 RNA5SP153-201ENST00000516498 76 ntBASIC3.46□□□□□ -1.86
RNF43Q68DV7 RNA5SP468-201ENST00000516782 93 ntBASIC3.46□□□□□ -1.86
RNF43Q68DV7 AC107934.2-201ENST00000518653 310 ntBASIC3.46□□□□□ -1.86
RNF43Q68DV7 AC245166.1-201ENST00000521012 253 ntBASIC3.46□□□□□ -1.86
RNF43Q68DV7 IGKV1-22-201ENST00000524313 326 ntBASIC3.46□□□□□ -1.86
RNF43Q68DV7 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.46□□□□□ -1.86
RNF43Q68DV7 PRELID2P1-201ENST00000552837 301 ntBASIC3.46□□□□□ -1.86
RNF43Q68DV7 MIR5004-201ENST00000579078 107 ntBASIC3.46□□□□□ -1.86
RNF43Q68DV7 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.46□□□□□ -1.86
RNF43Q68DV7 RNU6-91P-201ENST00000607774 107 ntBASIC3.46□□□□□ -1.86
RNF43Q68DV7 AC093732.2-201ENST00000607950 274 ntBASIC3.46□□□□□ -1.86
RNF43Q68DV7 AP001318.4-201ENST00000616637 121 ntBASIC3.46□□□□□ -1.86
RNF43Q68DV7 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.46□□□□□ -1.86
RNF43Q68DV7 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
RNF43Q68DV7 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
RNF43Q68DV7 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
RNF43Q68DV7 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.46□□□□□ -1.86
RNF43Q68DV7 AL159152.1-201ENST00000635019 2587 ntBASIC3.46□□□□□ -1.86
RNF43Q68DV7 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
RNF43Q68DV7 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.45□□□□□ -1.86
RNF43Q68DV7 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
RNF43Q68DV7 snoU2_19.1-201ENST00000362361 80 ntBASIC3.45□□□□□ -1.86
RNF43Q68DV7 Y_RNA.52-201ENST00000362760 96 ntBASIC3.45□□□□□ -1.86
RNF43Q68DV7 SNORA80A-201ENST00000363922 136 ntBASIC3.45□□□□□ -1.86
RNF43Q68DV7 Y_RNA.634-201ENST00000364811 113 ntBASIC3.45□□□□□ -1.86
RNF43Q68DV7 RNU6-49P-201ENST00000384256 107 ntBASIC3.45□□□□□ -1.86
RNF43Q68DV7 AL139095.1-201ENST00000404326 391 ntBASIC3.45□□□□□ -1.86
RNF43Q68DV7 MIR1263-201ENST00000408324 86 ntBASIC3.45□□□□□ -1.86
RNF43Q68DV7 RPS26P55-201ENST00000471178 356 ntBASIC3.45□□□□□ -1.86
RNF43Q68DV7 RNU6-63P-201ENST00000516690 95 ntBASIC3.45□□□□□ -1.86
RNF43Q68DV7 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.45□□□□□ -1.86
RNF43Q68DV7 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
RNF43Q68DV7 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
RNF43Q68DV7 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
RNF43Q68DV7 AC069528.2-201ENST00000624849 1991 ntBASIC3.45□□□□□ -1.86
RNF43Q68DV7 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
RNF43Q68DV7 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
RNF43Q68DV7 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.45□□□□□ -1.86
RNF43Q68DV7 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
RNF43Q68DV7 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
RNF43Q68DV7 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.44□□□□□ -1.86
RNF43Q68DV7 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.44□□□□□ -1.86
RNF43Q68DV7 AL672296.1-201ENST00000427780 2158 ntBASIC3.44□□□□□ -1.86
RNF43Q68DV7 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
RNF43Q68DV7 RNU6-766P-201ENST00000362478 107 ntBASIC3.44□□□□□ -1.86
RNF43Q68DV7 SNORA51.4-201ENST00000364993 124 ntBASIC3.44□□□□□ -1.86
RNF43Q68DV7 RNU6-756P-201ENST00000383997 107 ntBASIC3.44□□□□□ -1.86
RNF43Q68DV7 RPL23AP67-201ENST00000465341 474 ntBASIC3.44□□□□□ -1.86
RNF43Q68DV7 HMGN2P9-201ENST00000476875 229 ntBASIC3.44□□□□□ -1.86
RNF43Q68DV7 MIR4276-201ENST00000584832 70 ntBASIC3.44□□□□□ -1.86
RNF43Q68DV7 MIR7106-201ENST00000612419 65 ntBASIC3.44□□□□□ -1.86
RNF43Q68DV7 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.44□□□□□ -1.86
RNF43Q68DV7 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
RNF43Q68DV7 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.44□□□□□ -1.86
RNF43Q68DV7 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
RNF43Q68DV7 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.43□□□□□ -1.86
RNF43Q68DV7 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
RNF43Q68DV7 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
RNF43Q68DV7 SNORA5B-201ENST00000363786 132 ntBASIC3.43□□□□□ -1.86
RNF43Q68DV7 Y_RNA.328-201ENST00000365208 113 ntBASIC3.43□□□□□ -1.86
RNF43Q68DV7 Y_RNA.558-201ENST00000384685 113 ntBASIC3.43□□□□□ -1.86
RNF43Q68DV7 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC3.43□□□□□ -1.86
RNF43Q68DV7 SNORA18.4-201ENST00000516440 124 ntBASIC3.43□□□□□ -1.86
RNF43Q68DV7 AC027419.1-201ENST00000522976 328 ntBASIC3.43□□□□□ -1.86
RNF43Q68DV7 HIGD1AP1-201ENST00000550979 275 ntBASIC3.43□□□□□ -1.86
RNF43Q68DV7 AC007012.1-201ENST00000567192 175 ntBASIC3.43□□□□□ -1.86
RNF43Q68DV7 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
RNF43Q68DV7 AC103988.1-201ENST00000566382 2177 ntBASIC3.43□□□□□ -1.86
RNF43Q68DV7 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.43□□□□□ -1.86
RNF43Q68DV7 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
RNF43Q68DV7 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.43□□□□□ -1.86
RNF43Q68DV7 AC000403.1-201ENST00000613696 3585 ntBASIC3.43□□□□□ -1.86
RNF43Q68DV7 AL136360.1-201ENST00000503377 1900 ntBASIC3.42□□□□□ -1.86
RNF43Q68DV7 AC017071.1-201ENST00000564407 2204 ntBASIC3.42□□□□□ -1.86
RNF43Q68DV7 RNU6-655P-201ENST00000362858 107 ntBASIC3.42□□□□□ -1.86
RNF43Q68DV7 Y_RNA.85-201ENST00000363014 111 ntBASIC3.42□□□□□ -1.86
RNF43Q68DV7 RNU6-1210P-201ENST00000363775 107 ntBASIC3.42□□□□□ -1.86
RNF43Q68DV7 RNU6-271P-201ENST00000363858 105 ntBASIC3.42□□□□□ -1.86
RNF43Q68DV7 RNA5SP125-201ENST00000364843 120 ntBASIC3.42□□□□□ -1.86
RNF43Q68DV7 SNORA51.10-201ENST00000384418 136 ntBASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 185.1 ms