Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 MRPL42P3-201ENST00000401492 326 ntBASIC-0.79□□□□□ -2.54
VPS13DQ5THJ4 RNU5E-9P-201ENST00000411164 104 ntBASIC-0.79□□□□□ -2.54
VPS13DQ5THJ4 DPRXP1-201ENST00000426312 460 ntBASIC-0.79□□□□□ -2.54
VPS13DQ5THJ4 AL500527.2-201ENST00000454105 95 ntBASIC-0.79□□□□□ -2.54
VPS13DQ5THJ4 LRRC6P1-201ENST00000532188 885 ntBASIC-0.79□□□□□ -2.54
VPS13DQ5THJ4 AC234772.3-201ENST00000602277 528 ntBASIC-0.79□□□□□ -2.54
VPS13DQ5THJ4 AC122133.1-201ENST00000613964 233 ntBASIC-0.79□□□□□ -2.54
VPS13DQ5THJ4 MIR9-2-201ENST00000384838 87 ntBASIC-0.79□□□□□ -2.54
VPS13DQ5THJ4 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC-0.79□□□□□ -2.54
VPS13DQ5THJ4 AC020550.1-201ENST00000447385 163 ntBASIC-0.79□□□□□ -2.54
VPS13DQ5THJ4 RNU6-416P-201ENST00000516265 103 ntBASIC-0.79□□□□□ -2.54
VPS13DQ5THJ4 AL139022.2-201ENST00000606934 443 ntBASIC-0.79□□□□□ -2.54
VPS13DQ5THJ4 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.79□□□□□ -2.54
VPS13DQ5THJ4 RNU6-188P-201ENST00000364207 107 ntBASIC-0.79□□□□□ -2.54
VPS13DQ5THJ4 RNU5A-6P-201ENST00000384136 116 ntBASIC-0.79□□□□□ -2.54
VPS13DQ5THJ4 MIR520C-201ENST00000385005 87 ntBASIC-0.79□□□□□ -2.54
VPS13DQ5THJ4 RPS3AP3-201ENST00000411933 242 ntBASIC-0.79□□□□□ -2.54
VPS13DQ5THJ4 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC-0.79□□□□□ -2.54
VPS13DQ5THJ4 XACT-201ENST00000468762 497 ntTSL 5 BASIC-0.79□□□□□ -2.54
VPS13DQ5THJ4 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC-0.79□□□□□ -2.54
VPS13DQ5THJ4 SNORA59B-202ENST00000578183 701 ntBASIC-0.79□□□□□ -2.54
VPS13DQ5THJ4 RNU6-1285P-201ENST00000363480 105 ntBASIC-0.8□□□□□ -2.54
VPS13DQ5THJ4 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC-0.8□□□□□ -2.54
VPS13DQ5THJ4 SNORA12.2-201ENST00000391040 156 ntBASIC-0.8□□□□□ -2.54
VPS13DQ5THJ4 CALM2P4-201ENST00000430810 426 ntBASIC-0.8□□□□□ -2.54
VPS13DQ5THJ4 RNU7-185P-201ENST00000459215 60 ntBASIC-0.8□□□□□ -2.54
VPS13DQ5THJ4 RNU6-287P-201ENST00000516230 98 ntBASIC-0.8□□□□□ -2.54
VPS13DQ5THJ4 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC-0.8□□□□□ -2.54
VPS13DQ5THJ4 AC099785.1-201ENST00000605697 437 ntBASIC-0.8□□□□□ -2.54
VPS13DQ5THJ4 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC-0.8□□□□□ -2.54
VPS13DQ5THJ4 RNU6-702P-201ENST00000364982 107 ntBASIC-0.8□□□□□ -2.54
VPS13DQ5THJ4 SNORD115-44-201ENST00000365391 82 ntBASIC-0.8□□□□□ -2.54
VPS13DQ5THJ4 MIR525-201ENST00000384978 85 ntBASIC-0.8□□□□□ -2.54
VPS13DQ5THJ4 AL096861.1-201ENST00000610899 123 ntBASIC-0.8□□□□□ -2.54
VPS13DQ5THJ4 MIR517B-201ENST00000385102 67 ntBASIC-0.8□□□□□ -2.54
VPS13DQ5THJ4 RNU4-22P-201ENST00000411058 166 ntBASIC-0.8□□□□□ -2.54
VPS13DQ5THJ4 USP9YP16-201ENST00000430287 407 ntBASIC-0.8□□□□□ -2.54
VPS13DQ5THJ4 RNA5SP169-201ENST00000517268 117 ntBASIC-0.8□□□□□ -2.54
VPS13DQ5THJ4 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC-0.8□□□□□ -2.54
VPS13DQ5THJ4 MIR3192-201ENST00000584920 77 ntBASIC-0.8□□□□□ -2.54
VPS13DQ5THJ4 Z99497.2-201ENST00000603634 310 ntBASIC-0.8□□□□□ -2.54
VPS13DQ5THJ4 SNORA70.25-201ENST00000612741 95 ntBASIC-0.8□□□□□ -2.54
VPS13DQ5THJ4 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-0.8□□□□□ -2.54
VPS13DQ5THJ4 Y_RNA.370-201ENST00000365589 108 ntBASIC-0.8□□□□□ -2.54
VPS13DQ5THJ4 AC117470.1-201ENST00000381974 330 ntBASIC-0.8□□□□□ -2.54
VPS13DQ5THJ4 MIR19A-201ENST00000384878 82 ntBASIC-0.8□□□□□ -2.54
VPS13DQ5THJ4 SNORD64-201ENST00000386683 67 ntBASIC-0.8□□□□□ -2.54
VPS13DQ5THJ4 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC-0.8□□□□□ -2.54
VPS13DQ5THJ4 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC-0.8□□□□□ -2.54
VPS13DQ5THJ4 RNU7-14P-201ENST00000459331 62 ntBASIC-0.8□□□□□ -2.54
VPS13DQ5THJ4 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC-0.8□□□□□ -2.54
VPS13DQ5THJ4 AL442663.2-201ENST00000554385 511 ntBASIC-0.8□□□□□ -2.54
VPS13DQ5THJ4 AC090617.3-201ENST00000573670 475 ntBASIC-0.8□□□□□ -2.54
VPS13DQ5THJ4 AC121247.2-201ENST00000604776 136 ntBASIC-0.8□□□□□ -2.54
VPS13DQ5THJ4 AP001033.2-201ENST00000609701 1003 ntBASIC-0.8□□□□□ -2.54
VPS13DQ5THJ4 AC005562.2-201ENST00000618264 111 ntBASIC-0.8□□□□□ -2.54
VPS13DQ5THJ4 AC027279.3-201ENST00000625055 122 ntBASIC-0.8□□□□□ -2.54
VPS13DQ5THJ4 Y_RNA.32-201ENST00000362589 110 ntBASIC-0.81□□□□□ -2.54
VPS13DQ5THJ4 SNORA33-201ENST00000363664 130 ntBASIC-0.81□□□□□ -2.54
VPS13DQ5THJ4 Y_RNA.365-201ENST00000365537 102 ntBASIC-0.81□□□□□ -2.54
VPS13DQ5THJ4 RNU6-535P-201ENST00000384722 107 ntBASIC-0.81□□□□□ -2.54
VPS13DQ5THJ4 RNA5SP390-201ENST00000410191 113 ntBASIC-0.81□□□□□ -2.54
VPS13DQ5THJ4 RNA5SP261-201ENST00000410536 106 ntBASIC-0.81□□□□□ -2.54
VPS13DQ5THJ4 TIMM9P3-201ENST00000428659 274 ntBASIC-0.81□□□□□ -2.54
VPS13DQ5THJ4 RPL23AP75-201ENST00000491601 451 ntBASIC-0.81□□□□□ -2.54
VPS13DQ5THJ4 AP003733.2-201ENST00000529409 171 ntBASIC-0.81□□□□□ -2.54
VPS13DQ5THJ4 AC023538.1-201ENST00000534576 736 ntBASIC-0.81□□□□□ -2.54
VPS13DQ5THJ4 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC-0.81□□□□□ -2.54
VPS13DQ5THJ4 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC-0.81□□□□□ -2.54
VPS13DQ5THJ4 MIR1273C-201ENST00000578669 77 ntBASIC-0.81□□□□□ -2.54
VPS13DQ5THJ4 snoZ196.1-201ENST00000625269 89 ntBASIC-0.81□□□□□ -2.54
VPS13DQ5THJ4 MIR340-201ENST00000362125 95 ntBASIC-0.81□□□□□ -2.54
VPS13DQ5THJ4 Y_RNA.174-201ENST00000363781 105 ntBASIC-0.81□□□□□ -2.54
VPS13DQ5THJ4 MIR125B2-201ENST00000385128 89 ntBASIC-0.81□□□□□ -2.54
VPS13DQ5THJ4 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.81□□□□□ -2.54
VPS13DQ5THJ4 RNU6-1245P-201ENST00000411130 106 ntBASIC-0.81□□□□□ -2.54
VPS13DQ5THJ4 SSR1P2-201ENST00000415208 787 ntBASIC-0.81□□□□□ -2.54
VPS13DQ5THJ4 SNORD22.1-201ENST00000516331 125 ntBASIC-0.81□□□□□ -2.54
VPS13DQ5THJ4 AP001372.4-201ENST00000524889 472 ntBASIC-0.81□□□□□ -2.54
VPS13DQ5THJ4 AC079610.2-201ENST00000604818 690 ntBASIC-0.81□□□□□ -2.54
VPS13DQ5THJ4 AC008536.2-201ENST00000607284 349 ntBASIC-0.81□□□□□ -2.54
VPS13DQ5THJ4 Y_RNA.56-201ENST00000362798 112 ntBASIC-0.81□□□□□ -2.54
VPS13DQ5THJ4 RNU6-619P-201ENST00000365146 108 ntBASIC-0.81□□□□□ -2.54
VPS13DQ5THJ4 AL031274.1-201ENST00000450334 232 ntBASIC-0.81□□□□□ -2.54
VPS13DQ5THJ4 AC244505.6-201ENST00000452829 130 ntBASIC-0.81□□□□□ -2.54
VPS13DQ5THJ4 AC006026.2-201ENST00000457376 180 ntBASIC-0.81□□□□□ -2.54
VPS13DQ5THJ4 SNORA31.14-201ENST00000516728 116 ntBASIC-0.81□□□□□ -2.54
VPS13DQ5THJ4 RNU6-528P-201ENST00000516926 100 ntBASIC-0.81□□□□□ -2.54
VPS13DQ5THJ4 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC-0.81□□□□□ -2.54
VPS13DQ5THJ4 SNORD92-201ENST00000585078 85 ntBASIC-0.81□□□□□ -2.54
VPS13DQ5THJ4 AC011374.2-201ENST00000607135 526 ntBASIC-0.81□□□□□ -2.54
VPS13DQ5THJ4 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC-0.81□□□□□ -2.54
VPS13DQ5THJ4 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC-0.82□□□□□ -2.54
VPS13DQ5THJ4 RNU6-1167P-201ENST00000363227 94 ntBASIC-0.82□□□□□ -2.54
VPS13DQ5THJ4 RNU6-580P-201ENST00000365159 107 ntBASIC-0.82□□□□□ -2.54
VPS13DQ5THJ4 RNU6-395P-201ENST00000365662 106 ntBASIC-0.82□□□□□ -2.54
VPS13DQ5THJ4 RNU6-637P-201ENST00000384050 107 ntBASIC-0.82□□□□□ -2.54
VPS13DQ5THJ4 AC092447.3-201ENST00000426027 686 ntBASIC-0.82□□□□□ -2.54
VPS13DQ5THJ4 ERLEC1P1-201ENST00000433806 578 ntBASIC-0.82□□□□□ -2.54
VPS13DQ5THJ4 AC098614.3-201ENST00000438957 440 ntBASIC-0.82□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 148.8 ms