Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 AC087499.7-201ENST00000441958 109 ntBASIC-0.97□□□□□ -2.56
CCDC58Q4VC31 AL031274.1-201ENST00000450334 232 ntBASIC-0.97□□□□□ -2.56
CCDC58Q4VC31 RNU6-344P-201ENST00000516635 111 ntBASIC-0.97□□□□□ -2.56
CCDC58Q4VC31 RNU6-63P-201ENST00000516690 95 ntBASIC-0.97□□□□□ -2.56
CCDC58Q4VC31 RNU6-1003P-201ENST00000517099 105 ntBASIC-0.97□□□□□ -2.56
CCDC58Q4VC31 MIR4802-201ENST00000581881 80 ntBASIC-0.97□□□□□ -2.56
CCDC58Q4VC31 AL139022.2-201ENST00000606934 443 ntBASIC-0.97□□□□□ -2.56
CCDC58Q4VC31 AC019226.2-201ENST00000625973 424 ntBASIC-0.97□□□□□ -2.56
CCDC58Q4VC31 UGP2-231ENST00000627474 264 ntTSL 5 BASIC-0.97□□□□□ -2.56
CCDC58Q4VC31 MIR4251-201ENST00000635819 61 ntBASIC-0.97□□□□□ -2.56
CCDC58Q4VC31 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.98□□□□□ -2.57
CCDC58Q4VC31 RNU6-827P-201ENST00000365553 106 ntBASIC-0.98□□□□□ -2.57
CCDC58Q4VC31 RNU2-39P-201ENST00000410604 198 ntBASIC-0.98□□□□□ -2.57
CCDC58Q4VC31 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC-0.98□□□□□ -2.57
CCDC58Q4VC31 AC007215.1-201ENST00000464893 276 ntBASIC-0.98□□□□□ -2.57
CCDC58Q4VC31 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC-0.98□□□□□ -2.57
CCDC58Q4VC31 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.98□□□□□ -2.57
CCDC58Q4VC31 RNA5SP337-201ENST00000517007 109 ntBASIC-0.98□□□□□ -2.57
CCDC58Q4VC31 AC133485.4-201ENST00000561835 220 ntBASIC-0.98□□□□□ -2.57
CCDC58Q4VC31 MIR3118-1-201ENST00000581787 76 ntBASIC-0.98□□□□□ -2.57
CCDC58Q4VC31 Y_RNA.100-201ENST00000363141 102 ntBASIC-0.99□□□□□ -2.57
CCDC58Q4VC31 SNORD49B-201ENST00000365172 72 ntBASIC-0.99□□□□□ -2.57
CCDC58Q4VC31 RNU6-39P-201ENST00000384344 107 ntBASIC-0.99□□□□□ -2.57
CCDC58Q4VC31 MIR1298-201ENST00000408783 112 ntBASIC-0.99□□□□□ -2.57
CCDC58Q4VC31 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC-0.99□□□□□ -2.57
CCDC58Q4VC31 AC133104.1-201ENST00000429100 218 ntBASIC-0.99□□□□□ -2.57
CCDC58Q4VC31 MTND2P3-201ENST00000452458 470 ntBASIC-0.99□□□□□ -2.57
CCDC58Q4VC31 USP9YP25-201ENST00000457708 443 ntBASIC-0.99□□□□□ -2.57
CCDC58Q4VC31 uc_338.28-201ENST00000612082 187 ntBASIC-0.99□□□□□ -2.57
CCDC58Q4VC31 SNORA72.1-201ENST00000363485 129 ntBASIC-1□□□□□ -2.57
CCDC58Q4VC31 RNU6-1303P-201ENST00000364841 107 ntBASIC-1□□□□□ -2.57
CCDC58Q4VC31 MIR136-201ENST00000385207 82 ntBASIC-1□□□□□ -2.57
CCDC58Q4VC31 AC243428.1-201ENST00000421099 264 ntBASIC-1□□□□□ -2.57
CCDC58Q4VC31 Z98949.2-201ENST00000440996 144 ntBASIC-1□□□□□ -2.57
CCDC58Q4VC31 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC-1□□□□□ -2.57
CCDC58Q4VC31 SUMO1P2-201ENST00000452524 304 ntBASIC-1□□□□□ -2.57
CCDC58Q4VC31 RNA5SP480-201ENST00000516840 109 ntBASIC-1□□□□□ -2.57
CCDC58Q4VC31 SNORA18.7-201ENST00000516910 131 ntBASIC-1□□□□□ -2.57
CCDC58Q4VC31 AC022616.6-201ENST00000520479 119 ntBASIC-1□□□□□ -2.57
CCDC58Q4VC31 MIR5589-201ENST00000579442 60 ntBASIC-1□□□□□ -2.57
CCDC58Q4VC31 AC091178.2-201ENST00000584401 117 ntBASIC-1□□□□□ -2.57
CCDC58Q4VC31 SNORA25.7-201ENST00000364375 127 ntBASIC-1.01□□□□□ -2.57
CCDC58Q4VC31 RNU6-396P-201ENST00000365369 105 ntBASIC-1.01□□□□□ -2.57
CCDC58Q4VC31 MIR516B2-201ENST00000385190 85 ntBASIC-1.01□□□□□ -2.57
CCDC58Q4VC31 MIR938-201ENST00000401216 83 ntBASIC-1.01□□□□□ -2.57
CCDC58Q4VC31 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC-1.01□□□□□ -2.57
CCDC58Q4VC31 AL022718.1-201ENST00000412004 84 ntBASIC-1.01□□□□□ -2.57
CCDC58Q4VC31 MTCO2P23-201ENST00000425216 680 ntBASIC-1.01□□□□□ -2.57
CCDC58Q4VC31 PIGPP3-201ENST00000425307 415 ntBASIC-1.01□□□□□ -2.57
CCDC58Q4VC31 RPL39P34-201ENST00000477141 156 ntBASIC-1.01□□□□□ -2.57
CCDC58Q4VC31 AC020891.4-201ENST00000605745 93 ntBASIC-1.01□□□□□ -2.57
CCDC58Q4VC31 AC006435.5-201ENST00000624486 112 ntBASIC-1.01□□□□□ -2.57
CCDC58Q4VC31 AL162726.3-218ENST00000636401 95 ntBASIC-1.01□□□□□ -2.57
CCDC58Q4VC31 RNU6-641P-201ENST00000384006 107 ntBASIC-1.02□□□□□ -2.57
CCDC58Q4VC31 MT-TN-201ENST00000387400 73 ntBASIC-1.02□□□□□ -2.57
CCDC58Q4VC31 RNU6ATAC6P-201ENST00000408132 126 ntBASIC-1.02□□□□□ -2.57
CCDC58Q4VC31 MIR320B2-201ENST00000408479 138 ntBASIC-1.02□□□□□ -2.57
CCDC58Q4VC31 RN7SKP142-201ENST00000411236 328 ntBASIC-1.02□□□□□ -2.57
CCDC58Q4VC31 MLLT10P1-201ENST00000418346 262 ntBASIC-1.02□□□□□ -2.57
CCDC58Q4VC31 AC079781.2-201ENST00000446424 169 ntBASIC-1.02□□□□□ -2.57
CCDC58Q4VC31 AC097462.1-201ENST00000514125 324 ntBASIC-1.02□□□□□ -2.57
CCDC58Q4VC31 MDM2-233ENST00000545204 398 ntTSL 5 BASIC-1.02□□□□□ -2.57
CCDC58Q4VC31 AC138869.1-201ENST00000568623 124 ntBASIC-1.02□□□□□ -2.57
CCDC58Q4VC31 MIR4307-201ENST00000582802 84 ntBASIC-1.02□□□□□ -2.57
CCDC58Q4VC31 MIR4436A-201ENST00000585278 85 ntBASIC-1.02□□□□□ -2.57
CCDC58Q4VC31 AC010525.2-201ENST00000590920 195 ntBASIC-1.02□□□□□ -2.57
CCDC58Q4VC31 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC-1.02□□□□□ -2.57
CCDC58Q4VC31 MIR7107-201ENST00000611489 80 ntBASIC-1.02□□□□□ -2.57
CCDC58Q4VC31 RNU6-433P-201ENST00000363216 104 ntBASIC-1.03□□□□□ -2.57
CCDC58Q4VC31 AC137499.1-201ENST00000427602 88 ntBASIC-1.03□□□□□ -2.57
CCDC58Q4VC31 RNU7-182P-201ENST00000459009 62 ntBASIC-1.03□□□□□ -2.57
CCDC58Q4VC31 AC091951.3-201ENST00000504093 246 ntBASIC-1.03□□□□□ -2.57
CCDC58Q4VC31 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC-1.03□□□□□ -2.57
CCDC58Q4VC31 RPL21P9-201ENST00000556149 474 ntBASIC-1.03□□□□□ -2.57
CCDC58Q4VC31 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC-1.03□□□□□ -2.57
CCDC58Q4VC31 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-1.03□□□□□ -2.57
CCDC58Q4VC31 AC100830.2-201ENST00000581636 240 ntBASIC-1.03□□□□□ -2.57
CCDC58Q4VC31 AC138649.3-201ENST00000622154 254 ntBASIC-1.03□□□□□ -2.57
CCDC58Q4VC31 RNU5B-2P-201ENST00000363036 113 ntBASIC-1.04□□□□□ -2.58
CCDC58Q4VC31 RNA5SP117-201ENST00000365294 118 ntBASIC-1.04□□□□□ -2.58
CCDC58Q4VC31 Y_RNA.370-201ENST00000365589 108 ntBASIC-1.04□□□□□ -2.58
CCDC58Q4VC31 Y_RNA.552-201ENST00000384665 112 ntBASIC-1.04□□□□□ -2.58
CCDC58Q4VC31 MIR604-201ENST00000384880 94 ntBASIC-1.04□□□□□ -2.58
CCDC58Q4VC31 MIR224-201ENST00000384889 81 ntBASIC-1.04□□□□□ -2.58
CCDC58Q4VC31 MIR558-201ENST00000384920 94 ntBASIC-1.04□□□□□ -2.58
CCDC58Q4VC31 MTCO3P19-201ENST00000415864 321 ntBASIC-1.04□□□□□ -2.58
CCDC58Q4VC31 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC-1.04□□□□□ -2.58
CCDC58Q4VC31 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC-1.04□□□□□ -2.58
CCDC58Q4VC31 RNU2-12P-201ENST00000517216 168 ntBASIC-1.04□□□□□ -2.58
CCDC58Q4VC31 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC-1.04□□□□□ -2.58
CCDC58Q4VC31 AL445984.1-201ENST00000637834 659 ntBASIC-1.04□□□□□ -2.58
CCDC58Q4VC31 RNU4-73P-201ENST00000363164 141 ntBASIC-1.05□□□□□ -2.58
CCDC58Q4VC31 RNU6-652P-201ENST00000365488 107 ntBASIC-1.05□□□□□ -2.58
CCDC58Q4VC31 FGFR1OP2P1-201ENST00000395943 500 ntBASIC-1.05□□□□□ -2.58
CCDC58Q4VC31 MIR1912-201ENST00000410389 80 ntBASIC-1.05□□□□□ -2.58
CCDC58Q4VC31 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC-1.05□□□□□ -2.58
CCDC58Q4VC31 BTBD7P2-201ENST00000441962 620 ntBASIC-1.05□□□□□ -2.58
CCDC58Q4VC31 RNU6-1291P-201ENST00000516591 104 ntBASIC-1.05□□□□□ -2.58
CCDC58Q4VC31 RNU7-172P-201ENST00000517125 64 ntBASIC-1.05□□□□□ -2.58
CCDC58Q4VC31 MTATP6P15-201ENST00000527233 835 ntBASIC-1.05□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 176.8 ms