Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 RNU6-1199P-201ENST00000411249 104 ntBASIC2.92□□□□□ -1.94
CCDC144BQ3MJ40 RNU6-1041P-201ENST00000516254 102 ntBASIC2.92□□□□□ -1.94
CCDC144BQ3MJ40 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.92□□□□□ -1.94
CCDC144BQ3MJ40 MIR8062-201ENST00000621515 85 ntBASIC2.92□□□□□ -1.94
CCDC144BQ3MJ40 MIR203B-201ENST00000636080 86 ntBASIC2.92□□□□□ -1.94
CCDC144BQ3MJ40 AC245060.5-201ENST00000610778 3293 ntBASIC2.91□□□□□ -1.94
CCDC144BQ3MJ40 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
CCDC144BQ3MJ40 CENPCP1-201ENST00000533085 2578 ntBASIC2.91□□□□□ -1.94
CCDC144BQ3MJ40 Y_RNA.105-201ENST00000363182 111 ntBASIC2.91□□□□□ -1.94
CCDC144BQ3MJ40 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
CCDC144BQ3MJ40 SNORA20B-201ENST00000384220 132 ntBASIC2.91□□□□□ -1.94
CCDC144BQ3MJ40 MIR873-201ENST00000401120 77 ntBASIC2.91□□□□□ -1.94
CCDC144BQ3MJ40 MIR1302-6-201ENST00000408466 90 ntBASIC2.91□□□□□ -1.94
CCDC144BQ3MJ40 RNA5SP181-201ENST00000410246 98 ntBASIC2.91□□□□□ -1.94
CCDC144BQ3MJ40 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.91□□□□□ -1.94
CCDC144BQ3MJ40 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC2.91□□□□□ -1.94
CCDC144BQ3MJ40 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.91□□□□□ -1.94
CCDC144BQ3MJ40 HMGN2P34-201ENST00000437647 269 ntBASIC2.91□□□□□ -1.94
CCDC144BQ3MJ40 POLR2KP2-201ENST00000438155 177 ntBASIC2.91□□□□□ -1.94
CCDC144BQ3MJ40 HMGB3P17-201ENST00000504195 649 ntBASIC2.91□□□□□ -1.94
CCDC144BQ3MJ40 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.91□□□□□ -1.94
CCDC144BQ3MJ40 U4.3-201ENST00000621047 82 ntBASIC2.91□□□□□ -1.94
CCDC144BQ3MJ40 ZNF658B-202ENST00000615961 3375 ntBASIC2.91□□□□□ -1.94
CCDC144BQ3MJ40 MTND5P6-201ENST00000422338 1798 ntBASIC2.9□□□□□ -1.94
CCDC144BQ3MJ40 U8.2-201ENST00000363156 134 ntBASIC2.9□□□□□ -1.95
CCDC144BQ3MJ40 RNU6-806P-201ENST00000365147 105 ntBASIC2.9□□□□□ -1.95
CCDC144BQ3MJ40 RNU1-51P-201ENST00000365345 176 ntBASIC2.9□□□□□ -1.95
CCDC144BQ3MJ40 RNU6-1248P-201ENST00000391096 64 ntBASIC2.9□□□□□ -1.95
CCDC144BQ3MJ40 SNORA53-201ENST00000391141 249 ntBASIC2.9□□□□□ -1.95
CCDC144BQ3MJ40 RNU11-5P-201ENST00000391216 129 ntBASIC2.9□□□□□ -1.95
CCDC144BQ3MJ40 AL031003.1-201ENST00000404229 172 ntBASIC2.9□□□□□ -1.95
CCDC144BQ3MJ40 MIR1283-2-201ENST00000408621 87 ntBASIC2.9□□□□□ -1.95
CCDC144BQ3MJ40 RNU6-710P-201ENST00000410424 105 ntBASIC2.9□□□□□ -1.95
CCDC144BQ3MJ40 CR769767.1-201ENST00000436337 346 ntBASIC2.9□□□□□ -1.95
CCDC144BQ3MJ40 AC011753.1-201ENST00000451001 220 ntBASIC2.9□□□□□ -1.95
CCDC144BQ3MJ40 MYL12BP1-201ENST00000569826 507 ntBASIC2.9□□□□□ -1.95
CCDC144BQ3MJ40 AC037487.3-201ENST00000606668 112 ntBASIC2.9□□□□□ -1.95
CCDC144BQ3MJ40 U1.36-201ENST00000620684 176 ntBASIC2.9□□□□□ -1.95
CCDC144BQ3MJ40 Z82195.2-201ENST00000612348 18351 ntBASIC2.9□□□□□ -1.95
CCDC144BQ3MJ40 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
CCDC144BQ3MJ40 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
CCDC144BQ3MJ40 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
CCDC144BQ3MJ40 SNORA27.1-201ENST00000362604 124 ntBASIC2.89□□□□□ -1.95
CCDC144BQ3MJ40 Y_RNA.222-201ENST00000364264 102 ntBASIC2.89□□□□□ -1.95
CCDC144BQ3MJ40 RNU6-290P-201ENST00000365212 101 ntBASIC2.89□□□□□ -1.95
CCDC144BQ3MJ40 RNU1-138P-201ENST00000384093 164 ntBASIC2.89□□□□□ -1.95
CCDC144BQ3MJ40 MIR518C-201ENST00000384822 101 ntBASIC2.89□□□□□ -1.95
CCDC144BQ3MJ40 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.89□□□□□ -1.95
CCDC144BQ3MJ40 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.89□□□□□ -1.95
CCDC144BQ3MJ40 CST2P1-201ENST00000425770 87 ntBASIC2.89□□□□□ -1.95
CCDC144BQ3MJ40 HMGN2P3-201ENST00000433603 273 ntBASIC2.89□□□□□ -1.95
CCDC144BQ3MJ40 HMGN2P5-201ENST00000436882 273 ntBASIC2.89□□□□□ -1.95
CCDC144BQ3MJ40 AC018634.1-201ENST00000437554 401 ntBASIC2.89□□□□□ -1.95
CCDC144BQ3MJ40 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.89□□□□□ -1.95
CCDC144BQ3MJ40 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CCDC144BQ3MJ40 RNU6-436P-201ENST00000516171 114 ntBASIC2.89□□□□□ -1.95
CCDC144BQ3MJ40 SNORA31.15-201ENST00000516771 132 ntBASIC2.89□□□□□ -1.95
CCDC144BQ3MJ40 AP005660.1-201ENST00000522972 293 ntBASIC2.89□□□□□ -1.95
CCDC144BQ3MJ40 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.89□□□□□ -1.95
CCDC144BQ3MJ40 MIR338-201ENST00000636369 67 ntBASIC2.89□□□□□ -1.95
CCDC144BQ3MJ40 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.88□□□□□ -1.95
CCDC144BQ3MJ40 Y_RNA.361-201ENST00000365515 120 ntBASIC2.88□□□□□ -1.95
CCDC144BQ3MJ40 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
CCDC144BQ3MJ40 AL355796.1-201ENST00000406706 323 ntBASIC2.88□□□□□ -1.95
CCDC144BQ3MJ40 SNORD23.1-201ENST00000408212 104 ntBASIC2.88□□□□□ -1.95
CCDC144BQ3MJ40 RPL21P38-201ENST00000418090 167 ntBASIC2.88□□□□□ -1.95
CCDC144BQ3MJ40 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.88□□□□□ -1.95
CCDC144BQ3MJ40 MTND2P29-201ENST00000438595 412 ntBASIC2.88□□□□□ -1.95
CCDC144BQ3MJ40 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.88□□□□□ -1.95
CCDC144BQ3MJ40 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.88□□□□□ -1.95
CCDC144BQ3MJ40 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.88□□□□□ -1.95
CCDC144BQ3MJ40 AL049779.4-201ENST00000604500 156 ntBASIC2.88□□□□□ -1.95
CCDC144BQ3MJ40 Y_RNA.26-201ENST00000362539 101 ntBASIC2.87□□□□□ -1.95
CCDC144BQ3MJ40 snoU2_19.2-201ENST00000363024 80 ntBASIC2.87□□□□□ -1.95
CCDC144BQ3MJ40 Y_RNA.383-201ENST00000383855 97 ntBASIC2.87□□□□□ -1.95
CCDC144BQ3MJ40 RNU6-196P-201ENST00000384315 107 ntBASIC2.87□□□□□ -1.95
CCDC144BQ3MJ40 Y_RNA.569-201ENST00000384749 103 ntBASIC2.87□□□□□ -1.95
CCDC144BQ3MJ40 RNU4-53P-201ENST00000410828 140 ntBASIC2.87□□□□□ -1.95
CCDC144BQ3MJ40 Z98742.3-201ENST00000418637 326 ntBASIC2.87□□□□□ -1.95
CCDC144BQ3MJ40 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.87□□□□□ -1.95
CCDC144BQ3MJ40 HSPE1P25-201ENST00000455484 251 ntBASIC2.87□□□□□ -1.95
CCDC144BQ3MJ40 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC2.87□□□□□ -1.95
CCDC144BQ3MJ40 TRBVB-201ENST00000477100 408 ntBASIC2.87□□□□□ -1.95
CCDC144BQ3MJ40 RPS27P22-201ENST00000478056 241 ntBASIC2.87□□□□□ -1.95
CCDC144BQ3MJ40 AC098869.1-201ENST00000481627 292 ntBASIC2.87□□□□□ -1.95
CCDC144BQ3MJ40 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.87□□□□□ -1.95
CCDC144BQ3MJ40 AL161670.1-201ENST00000554348 137 ntBASIC2.87□□□□□ -1.95
CCDC144BQ3MJ40 AC127459.3-201ENST00000624328 466 ntBASIC2.87□□□□□ -1.95
CCDC144BQ3MJ40 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
CCDC144BQ3MJ40 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.87□□□□□ -1.95
CCDC144BQ3MJ40 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.87□□□□□ -1.95
CCDC144BQ3MJ40 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.86□□□□□ -1.95
CCDC144BQ3MJ40 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.86□□□□□ -1.95
CCDC144BQ3MJ40 Y_RNA.84-201ENST00000363011 104 ntBASIC2.86□□□□□ -1.95
CCDC144BQ3MJ40 RNU6-417P-201ENST00000384712 107 ntBASIC2.86□□□□□ -1.95
CCDC144BQ3MJ40 MRPS10P1-201ENST00000448483 130 ntBASIC2.86□□□□□ -1.95
CCDC144BQ3MJ40 RPL23AP7-203ENST00000449021 469 ntBASIC2.86□□□□□ -1.95
CCDC144BQ3MJ40 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.86□□□□□ -1.95
CCDC144BQ3MJ40 RNA5SP20-201ENST00000515976 84 ntBASIC2.86□□□□□ -1.95
CCDC144BQ3MJ40 RNU2-19P-201ENST00000517288 84 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms