Protein–RNA interactions for Protein: Q12824

SMARCB1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1Q12824 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.11□□□□□ -2.23
SMARCB1Q12824 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.11□□□□□ -2.23
SMARCB1Q12824 AC103851.1-201ENST00000506833 274 ntBASIC1.11□□□□□ -2.23
SMARCB1Q12824 RNU7-175P-201ENST00000515915 61 ntBASIC1.11□□□□□ -2.23
SMARCB1Q12824 RNU6-358P-201ENST00000516564 75 ntBASIC1.11□□□□□ -2.23
SMARCB1Q12824 RNA5SP481-201ENST00000516814 122 ntBASIC1.11□□□□□ -2.23
SMARCB1Q12824 AC019176.1-201ENST00000518519 225 ntBASIC1.11□□□□□ -2.23
SMARCB1Q12824 AL442163.3-201ENST00000554110 156 ntBASIC1.11□□□□□ -2.23
SMARCB1Q12824 AL929325.1-201ENST00000603096 117 ntBASIC1.11□□□□□ -2.23
SMARCB1Q12824 AC093913.1-201ENST00000614178 329 ntBASIC1.11□□□□□ -2.23
SMARCB1Q12824 AL121890.5-201ENST00000620848 304 ntBASIC1.11□□□□□ -2.23
SMARCB1Q12824 AC027514.1-201ENST00000588561 1603 ntBASIC1.11□□□□□ -2.23
SMARCB1Q12824 MTND5P16-201ENST00000460269 1703 ntBASIC1.1□□□□□ -2.23
SMARCB1Q12824 U3.8-201ENST00000363675 217 ntBASIC1.1□□□□□ -2.23
SMARCB1Q12824 Y_RNA.404-201ENST00000383978 102 ntBASIC1.1□□□□□ -2.23
SMARCB1Q12824 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC1.1□□□□□ -2.23
SMARCB1Q12824 MIR1253-201ENST00000408273 105 ntBASIC1.1□□□□□ -2.23
SMARCB1Q12824 RNU4-14P-201ENST00000410858 122 ntBASIC1.1□□□□□ -2.23
SMARCB1Q12824 FCF1P9-201ENST00000412546 282 ntBASIC1.1□□□□□ -2.23
SMARCB1Q12824 AC027119.1-201ENST00000440877 241 ntBASIC1.1□□□□□ -2.23
SMARCB1Q12824 MTND4P18-201ENST00000447010 465 ntBASIC1.1□□□□□ -2.23
SMARCB1Q12824 FGF7P6-202ENST00000451282 293 ntBASIC1.1□□□□□ -2.23
SMARCB1Q12824 NDUFB4P10-201ENST00000452541 359 ntBASIC1.1□□□□□ -2.23
SMARCB1Q12824 RPS26P45-201ENST00000471748 340 ntBASIC1.1□□□□□ -2.23
SMARCB1Q12824 OR2A41P-201ENST00000473586 105 ntBASIC1.1□□□□□ -2.23
SMARCB1Q12824 RPL7P42-201ENST00000481005 679 ntBASIC1.1□□□□□ -2.23
SMARCB1Q12824 Y_RNA.673-201ENST00000516306 88 ntBASIC1.1□□□□□ -2.23
SMARCB1Q12824 RNU6-1016P-201ENST00000516689 94 ntBASIC1.1□□□□□ -2.23
SMARCB1Q12824 RNU6-1198P-201ENST00000516904 67 ntBASIC1.1□□□□□ -2.23
SMARCB1Q12824 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.1□□□□□ -2.23
SMARCB1Q12824 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.1□□□□□ -2.23
SMARCB1Q12824 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.1□□□□□ -2.23
SMARCB1Q12824 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.1□□□□□ -2.23
SMARCB1Q12824 AC019288.1-201ENST00000557918 224 ntBASIC1.1□□□□□ -2.23
SMARCB1Q12824 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.1□□□□□ -2.23
SMARCB1Q12824 AL390123.1-201ENST00000603216 237 ntBASIC1.1□□□□□ -2.23
SMARCB1Q12824 HSPE1P19-201ENST00000603327 295 ntBASIC1.1□□□□□ -2.23
SMARCB1Q12824 Y_RNA.88-201ENST00000363029 99 ntBASIC1.09□□□□□ -2.23
SMARCB1Q12824 Y_RNA.179-201ENST00000363844 90 ntBASIC1.09□□□□□ -2.23
SMARCB1Q12824 SNORA72.2-201ENST00000365028 127 ntBASIC1.09□□□□□ -2.23
SMARCB1Q12824 RNU6-192P-201ENST00000391253 100 ntBASIC1.09□□□□□ -2.23
SMARCB1Q12824 EBAG9P1-201ENST00000418955 543 ntBASIC1.09□□□□□ -2.23
SMARCB1Q12824 AL139396.1-201ENST00000421137 167 ntBASIC1.09□□□□□ -2.23
SMARCB1Q12824 AL353997.1-201ENST00000432936 108 ntBASIC1.09□□□□□ -2.23
SMARCB1Q12824 AC074290.1-201ENST00000448883 135 ntBASIC1.09□□□□□ -2.23
SMARCB1Q12824 MTND3P10-201ENST00000450967 341 ntBASIC1.09□□□□□ -2.23
SMARCB1Q12824 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.09□□□□□ -2.23
SMARCB1Q12824 RPL30P7-201ENST00000479312 323 ntBASIC1.09□□□□□ -2.23
SMARCB1Q12824 HMGN1P12-201ENST00000499125 195 ntBASIC1.09□□□□□ -2.23
SMARCB1Q12824 AC018710.1-201ENST00000506509 158 ntBASIC1.09□□□□□ -2.23
SMARCB1Q12824 RNU6-1114P-201ENST00000516022 107 ntBASIC1.09□□□□□ -2.23
SMARCB1Q12824 RNU6-1146P-201ENST00000516282 102 ntBASIC1.09□□□□□ -2.23
SMARCB1Q12824 RNU6-113P-201ENST00000516653 101 ntBASIC1.09□□□□□ -2.23
SMARCB1Q12824 AC105029.1-201ENST00000520250 669 ntBASIC1.09□□□□□ -2.23
SMARCB1Q12824 AC093023.1-201ENST00000547375 507 ntBASIC1.09□□□□□ -2.23
SMARCB1Q12824 SNORD114-21-201ENST00000606412 72 ntBASIC1.09□□□□□ -2.23
SMARCB1Q12824 AC009229.3-201ENST00000608056 282 ntBASIC1.09□□□□□ -2.23
SMARCB1Q12824 AC010999.1-201ENST00000611856 324 ntBASIC1.09□□□□□ -2.23
SMARCB1Q12824 AC021506.2-201ENST00000612354 169 ntBASIC1.09□□□□□ -2.23
SMARCB1Q12824 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.24
SMARCB1Q12824 MIR96-201ENST00000362288 78 ntBASIC1.08□□□□□ -2.24
SMARCB1Q12824 RNA5SP361-201ENST00000362686 118 ntBASIC1.08□□□□□ -2.24
SMARCB1Q12824 Y_RNA.116-201ENST00000363292 103 ntBASIC1.08□□□□□ -2.24
SMARCB1Q12824 RNU6-280P-201ENST00000364145 104 ntBASIC1.08□□□□□ -2.24
SMARCB1Q12824 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.08□□□□□ -2.24
SMARCB1Q12824 Y_RNA.490-201ENST00000384413 102 ntBASIC1.08□□□□□ -2.24
SMARCB1Q12824 MIR518E-201ENST00000385252 88 ntBASIC1.08□□□□□ -2.24
SMARCB1Q12824 MRPL35P1-201ENST00000404272 572 ntBASIC1.08□□□□□ -2.24
SMARCB1Q12824 RNU6-1050P-201ENST00000410388 107 ntBASIC1.08□□□□□ -2.24
SMARCB1Q12824 ELOCP21-201ENST00000412558 336 ntBASIC1.08□□□□□ -2.24
SMARCB1Q12824 AC008134.1-201ENST00000420943 193 ntBASIC1.08□□□□□ -2.24
SMARCB1Q12824 EIF1P2-201ENST00000428233 350 ntBASIC1.08□□□□□ -2.24
SMARCB1Q12824 USP9YP16-201ENST00000430287 407 ntBASIC1.08□□□□□ -2.24
SMARCB1Q12824 AC069257.2-201ENST00000441819 155 ntBASIC1.08□□□□□ -2.24
SMARCB1Q12824 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.08□□□□□ -2.24
SMARCB1Q12824 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.08□□□□□ -2.24
SMARCB1Q12824 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.08□□□□□ -2.24
SMARCB1Q12824 USP9YP23-201ENST00000455085 407 ntBASIC1.08□□□□□ -2.24
SMARCB1Q12824 SNORD65B-201ENST00000459126 73 ntBASIC1.08□□□□□ -2.24
SMARCB1Q12824 MTND4P17-201ENST00000470444 350 ntBASIC1.08□□□□□ -2.24
SMARCB1Q12824 RPS23P4-201ENST00000487908 423 ntBASIC1.08□□□□□ -2.24
SMARCB1Q12824 AC024995.1-201ENST00000523014 93 ntBASIC1.08□□□□□ -2.24
SMARCB1Q12824 AP002001.1-203ENST00000534002 267 ntBASIC1.08□□□□□ -2.24
SMARCB1Q12824 AC080078.2-201ENST00000603766 501 ntBASIC1.08□□□□□ -2.24
SMARCB1Q12824 AL365434.2-201ENST00000607979 234 ntBASIC1.08□□□□□ -2.24
SMARCB1Q12824 MIR6857-201ENST00000613267 93 ntBASIC1.08□□□□□ -2.24
SMARCB1Q12824 U6.73-201ENST00000619194 103 ntBASIC1.08□□□□□ -2.24
SMARCB1Q12824 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
SMARCB1Q12824 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.07□□□□□ -2.24
SMARCB1Q12824 SNORD114-22-201ENST00000365423 72 ntBASIC1.07□□□□□ -2.24
SMARCB1Q12824 SNORA22-201ENST00000383907 134 ntBASIC1.07□□□□□ -2.24
SMARCB1Q12824 SNORA22C-201ENST00000384614 134 ntBASIC1.07□□□□□ -2.24
SMARCB1Q12824 MIR515-2-201ENST00000384883 83 ntBASIC1.07□□□□□ -2.24
SMARCB1Q12824 MIR515-1-201ENST00000384884 83 ntBASIC1.07□□□□□ -2.24
SMARCB1Q12824 MIR329-1-201ENST00000385028 80 ntBASIC1.07□□□□□ -2.24
SMARCB1Q12824 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
SMARCB1Q12824 RNA5SP323-201ENST00000391094 133 ntBASIC1.07□□□□□ -2.24
SMARCB1Q12824 RNU6-510P-201ENST00000391239 108 ntBASIC1.07□□□□□ -2.24
SMARCB1Q12824 RNU6-1186P-201ENST00000410429 97 ntBASIC1.07□□□□□ -2.24
SMARCB1Q12824 AL135790.2-201ENST00000437701 267 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 830.4 ms