Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
LTBQ06643 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
LTBQ06643 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
LTBQ06643 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
LTBQ06643 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.24□□□□□ -2.05
LTBQ06643 Y_RNA.82-201ENST00000363000 102 ntBASIC2.24□□□□□ -2.05
LTBQ06643 Y_RNA.92-201ENST00000363043 102 ntBASIC2.24□□□□□ -2.05
LTBQ06643 Y_RNA.235-201ENST00000364412 102 ntBASIC2.24□□□□□ -2.05
LTBQ06643 SNORD114-30-201ENST00000364448 72 ntBASIC2.24□□□□□ -2.05
LTBQ06643 Y_RNA.306-201ENST00000365015 102 ntBASIC2.24□□□□□ -2.05
LTBQ06643 Y_RNA.312-201ENST00000365089 102 ntBASIC2.24□□□□□ -2.05
LTBQ06643 Y_RNA.322-201ENST00000365151 102 ntBASIC2.24□□□□□ -2.05
LTBQ06643 RNU6-514P-201ENST00000384208 107 ntBASIC2.24□□□□□ -2.05
LTBQ06643 SNORA67.2-201ENST00000384300 149 ntBASIC2.24□□□□□ -2.05
LTBQ06643 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
LTBQ06643 MIR1287-201ENST00000408492 90 ntBASIC2.24□□□□□ -2.05
LTBQ06643 Y_RNA.590-201ENST00000410140 107 ntBASIC2.24□□□□□ -2.05
LTBQ06643 RNA5SP475-201ENST00000410568 110 ntBASIC2.24□□□□□ -2.05
LTBQ06643 RNU6-1328P-201ENST00000410938 106 ntBASIC2.24□□□□□ -2.05
LTBQ06643 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.24□□□□□ -2.05
LTBQ06643 MICF-203ENST00000432679 129 ntBASIC2.24□□□□□ -2.05
LTBQ06643 Y_RNA.650-201ENST00000459002 102 ntBASIC2.24□□□□□ -2.05
LTBQ06643 AC107393.1-201ENST00000512403 346 ntBASIC2.24□□□□□ -2.05
LTBQ06643 RNU6-191P-201ENST00000516295 94 ntBASIC2.24□□□□□ -2.05
LTBQ06643 Y_RNA.679-201ENST00000516416 91 ntBASIC2.24□□□□□ -2.05
LTBQ06643 RPPH1-2P-201ENST00000516688 293 ntBASIC2.24□□□□□ -2.05
LTBQ06643 Y_RNA.777-201ENST00000516982 102 ntBASIC2.24□□□□□ -2.05
LTBQ06643 RNU2-12P-201ENST00000517216 168 ntBASIC2.24□□□□□ -2.05
LTBQ06643 AC109329.2-201ENST00000519658 482 ntBASIC2.24□□□□□ -2.05
LTBQ06643 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.24□□□□□ -2.05
LTBQ06643 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.24□□□□□ -2.05
LTBQ06643 Y_RNA.771-201ENST00000598668 102 ntBASIC2.24□□□□□ -2.05
LTBQ06643 DEFB117-201ENST00000602356 141 ntBASIC2.24□□□□□ -2.05
LTBQ06643 AC005828.6-201ENST00000606610 232 ntBASIC2.24□□□□□ -2.05
LTBQ06643 Y_RNA.789-201ENST00000622480 102 ntBASIC2.24□□□□□ -2.05
LTBQ06643 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
LTBQ06643 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.24□□□□□ -2.05
LTBQ06643 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.24□□□□□ -2.05
LTBQ06643 ZNF271P-202ENST00000465539 1970 ntBASIC2.23□□□□□ -2.05
LTBQ06643 RNU1-72P-201ENST00000362976 153 ntBASIC2.23□□□□□ -2.05
LTBQ06643 Y_RNA.217-201ENST00000364214 105 ntBASIC2.23□□□□□ -2.05
LTBQ06643 SNORD32B-201ENST00000364460 84 ntBASIC2.23□□□□□ -2.05
LTBQ06643 RNU6-47P-201ENST00000383866 107 ntBASIC2.23□□□□□ -2.05
LTBQ06643 RNU6-1264P-201ENST00000383891 107 ntBASIC2.23□□□□□ -2.05
LTBQ06643 RNU6-1310P-201ENST00000384153 107 ntBASIC2.23□□□□□ -2.05
LTBQ06643 Y_RNA.555-201ENST00000384673 110 ntBASIC2.23□□□□□ -2.05
LTBQ06643 PCNPP3-201ENST00000393579 471 ntBASIC2.23□□□□□ -2.05
LTBQ06643 Y_RNA.793-201ENST00000411222 111 ntBASIC2.23□□□□□ -2.05
LTBQ06643 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.23□□□□□ -2.05
LTBQ06643 SNORD2.1-201ENST00000458762 69 ntBASIC2.23□□□□□ -2.05
LTBQ06643 Y_RNA.641-201ENST00000459414 105 ntBASIC2.23□□□□□ -2.05
LTBQ06643 AC140059.1-201ENST00000489238 361 ntBASIC2.23□□□□□ -2.05
LTBQ06643 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.23□□□□□ -2.05
LTBQ06643 RNU6-436P-201ENST00000516171 114 ntBASIC2.23□□□□□ -2.05
LTBQ06643 SNORA31.15-201ENST00000516771 132 ntBASIC2.23□□□□□ -2.05
LTBQ06643 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.23□□□□□ -2.05
LTBQ06643 AL512605.2-201ENST00000592972 256 ntBASIC2.23□□□□□ -2.05
LTBQ06643 SNORD11B-201ENST00000607707 90 ntBASIC2.23□□□□□ -2.05
LTBQ06643 AC068205.3-201ENST00000636385 468 ntBASIC2.23□□□□□ -2.05
LTBQ06643 MIR7515-201ENST00000637837 67 ntBASIC2.23□□□□□ -2.05
LTBQ06643 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.23□□□□□ -2.05
LTBQ06643 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.23□□□□□ -2.05
LTBQ06643 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.23□□□□□ -2.05
LTBQ06643 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.22□□□□□ -2.05
LTBQ06643 Y_RNA.180-201ENST00000363867 113 ntBASIC2.22□□□□□ -2.05
LTBQ06643 Y_RNA.329-201ENST00000365209 107 ntBASIC2.22□□□□□ -2.05
LTBQ06643 RNU6-886P-201ENST00000384319 105 ntBASIC2.22□□□□□ -2.05
LTBQ06643 MIR518C-201ENST00000384822 101 ntBASIC2.22□□□□□ -2.05
LTBQ06643 U3.40-201ENST00000408706 208 ntBASIC2.22□□□□□ -2.05
LTBQ06643 Y_RNA.597-201ENST00000410463 100 ntBASIC2.22□□□□□ -2.05
LTBQ06643 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.22□□□□□ -2.05
LTBQ06643 MIR449C-201ENST00000516047 92 ntBASIC2.22□□□□□ -2.05
LTBQ06643 RNY3P16-201ENST00000516338 101 ntBASIC2.22□□□□□ -2.05
LTBQ06643 RNA5SP402-201ENST00000517148 110 ntBASIC2.22□□□□□ -2.05
LTBQ06643 AC022559.1-201ENST00000520905 205 ntBASIC2.22□□□□□ -2.05
LTBQ06643 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.22□□□□□ -2.05
LTBQ06643 AL137847.3-201ENST00000611521 109 ntBASIC2.22□□□□□ -2.05
LTBQ06643 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.22□□□□□ -2.05
LTBQ06643 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
LTBQ06643 AC090517.3-201ENST00000625170 141 ntBASIC2.22□□□□□ -2.05
LTBQ06643 snoU18.1-201ENST00000629629 71 ntBASIC2.22□□□□□ -2.05
LTBQ06643 MIR7157-201ENST00000635801 60 ntBASIC2.22□□□□□ -2.05
LTBQ06643 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.22□□□□□ -2.05
LTBQ06643 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
LTBQ06643 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
LTBQ06643 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
LTBQ06643 MIR21-201ENST00000362134 72 ntBASIC2.21□□□□□ -2.06
LTBQ06643 Y_RNA.270-201ENST00000364693 104 ntBASIC2.21□□□□□ -2.06
LTBQ06643 MIR548B-201ENST00000385247 97 ntBASIC2.21□□□□□ -2.06
LTBQ06643 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.21□□□□□ -2.06
LTBQ06643 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.21□□□□□ -2.06
LTBQ06643 COX6CP14-201ENST00000469580 174 ntBASIC2.21□□□□□ -2.06
LTBQ06643 RNA5SP112-201ENST00000515937 99 ntBASIC2.21□□□□□ -2.06
LTBQ06643 RNU6-1098P-201ENST00000516772 96 ntBASIC2.21□□□□□ -2.06
LTBQ06643 AC090616.3-201ENST00000582184 217 ntBASIC2.21□□□□□ -2.06
LTBQ06643 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
LTBQ06643 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
LTBQ06643 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
LTBQ06643 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
LTBQ06643 SNORD114-1-201ENST00000362705 72 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 211 ms