Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 RNU6-24P-201ENST00000384440 107 ntBASIC-0.32□□□□□ -2.46
HSPG2P98160 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.32□□□□□ -2.46
HSPG2P98160 MIR204-201ENST00000385200 110 ntBASIC-0.32□□□□□ -2.46
HSPG2P98160 RNU6-1025P-201ENST00000410629 104 ntBASIC-0.32□□□□□ -2.46
HSPG2P98160 RPL21P38-201ENST00000418090 167 ntBASIC-0.32□□□□□ -2.46
HSPG2P98160 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC-0.32□□□□□ -2.46
HSPG2P98160 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC-0.32□□□□□ -2.46
HSPG2P98160 CALM2P4-201ENST00000430810 426 ntBASIC-0.32□□□□□ -2.46
HSPG2P98160 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC-0.32□□□□□ -2.46
HSPG2P98160 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC-0.32□□□□□ -2.46
HSPG2P98160 AC113347.3-201ENST00000509113 148 ntBASIC-0.32□□□□□ -2.46
HSPG2P98160 AC104383.1-201ENST00000530297 370 ntBASIC-0.32□□□□□ -2.46
HSPG2P98160 RPL21P9-201ENST00000556149 474 ntBASIC-0.32□□□□□ -2.46
HSPG2P98160 MIR548AC-201ENST00000585049 88 ntBASIC-0.32□□□□□ -2.46
HSPG2P98160 uc_338.28-201ENST00000612082 187 ntBASIC-0.32□□□□□ -2.46
HSPG2P98160 TCL6_2.1-201ENST00000615162 119 ntBASIC-0.32□□□□□ -2.46
HSPG2P98160 MTND5P42-201ENST00000637720 498 ntBASIC-0.32□□□□□ -2.46
HSPG2P98160 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC-0.32□□□□□ -2.46
HSPG2P98160 U3.4-201ENST00000363352 213 ntBASIC-0.32□□□□□ -2.46
HSPG2P98160 MIR548L-201ENST00000408303 86 ntBASIC-0.32□□□□□ -2.46
HSPG2P98160 RNU7-28P-201ENST00000516759 62 ntBASIC-0.32□□□□□ -2.46
HSPG2P98160 RNU6-677P-201ENST00000516914 101 ntBASIC-0.32□□□□□ -2.46
HSPG2P98160 AC025647.1-201ENST00000517879 253 ntBASIC-0.32□□□□□ -2.46
HSPG2P98160 DEFB108A-201ENST00000530110 222 ntBASIC-0.32□□□□□ -2.46
HSPG2P98160 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC-0.32□□□□□ -2.46
HSPG2P98160 AL133153.1-201ENST00000557756 303 ntBASIC-0.32□□□□□ -2.46
HSPG2P98160 AC006600.1-201ENST00000572529 153 ntBASIC-0.32□□□□□ -2.46
HSPG2P98160 AL359999.1-201ENST00000604513 294 ntBASIC-0.32□□□□□ -2.46
HSPG2P98160 AC104073.3-201ENST00000610942 955 ntBASIC-0.32□□□□□ -2.46
HSPG2P98160 AC010999.1-201ENST00000611856 324 ntBASIC-0.32□□□□□ -2.46
HSPG2P98160 MIR7844-201ENST00000616161 122 ntBASIC-0.32□□□□□ -2.46
HSPG2P98160 AC022960.3-201ENST00000619794 441 ntBASIC-0.32□□□□□ -2.46
HSPG2P98160 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC-0.32□□□□□ -2.46
HSPG2P98160 Y_RNA.336-201ENST00000365307 109 ntBASIC-0.32□□□□□ -2.46
HSPG2P98160 RNU6-650P-201ENST00000365658 111 ntBASIC-0.32□□□□□ -2.46
HSPG2P98160 SNORD65C-201ENST00000390962 71 ntBASIC-0.32□□□□□ -2.46
HSPG2P98160 RNY4P36-201ENST00000391116 96 ntBASIC-0.32□□□□□ -2.46
HSPG2P98160 MIR876-201ENST00000401147 81 ntBASIC-0.32□□□□□ -2.46
HSPG2P98160 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC-0.32□□□□□ -2.46
HSPG2P98160 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC-0.32□□□□□ -2.46
HSPG2P98160 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC-0.32□□□□□ -2.46
HSPG2P98160 RNU6-760P-201ENST00000516078 97 ntBASIC-0.32□□□□□ -2.46
HSPG2P98160 RNU6-135P-201ENST00000516769 101 ntBASIC-0.32□□□□□ -2.46
HSPG2P98160 MIR4677-201ENST00000584153 80 ntBASIC-0.32□□□□□ -2.46
HSPG2P98160 AC138207.3-201ENST00000585289 166 ntBASIC-0.32□□□□□ -2.46
HSPG2P98160 AP000753.3-201ENST00000604083 169 ntBASIC-0.32□□□□□ -2.46
HSPG2P98160 AP002802.2-201ENST00000605877 235 ntBASIC-0.32□□□□□ -2.46
HSPG2P98160 AC107905.1-201ENST00000616204 426 ntBASIC-0.32□□□□□ -2.46
HSPG2P98160 U6.73-201ENST00000619194 103 ntBASIC-0.32□□□□□ -2.46
HSPG2P98160 RNU6-853P-201ENST00000364306 107 ntBASIC-0.33□□□□□ -2.46
HSPG2P98160 RNU6-726P-201ENST00000364680 107 ntBASIC-0.33□□□□□ -2.46
HSPG2P98160 SNORA22B-201ENST00000383876 138 ntBASIC-0.33□□□□□ -2.46
HSPG2P98160 SNORD65.1-201ENST00000390889 71 ntBASIC-0.33□□□□□ -2.46
HSPG2P98160 AL355143.1-201ENST00000407101 841 ntBASIC-0.33□□□□□ -2.46
HSPG2P98160 RNA5SP95-201ENST00000410319 137 ntBASIC-0.33□□□□□ -2.46
HSPG2P98160 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC-0.33□□□□□ -2.46
HSPG2P98160 MIR4293-201ENST00000584305 78 ntBASIC-0.33□□□□□ -2.46
HSPG2P98160 AC012433.1-201ENST00000588916 398 ntBASIC-0.33□□□□□ -2.46
HSPG2P98160 AP000907.4-201ENST00000604143 237 ntBASIC-0.33□□□□□ -2.46
HSPG2P98160 AC098679.4-201ENST00000624241 654 ntBASIC-0.33□□□□□ -2.46
HSPG2P98160 AL391099.1-201ENST00000624635 187 ntBASIC-0.33□□□□□ -2.46
HSPG2P98160 AC005592.1-201ENST00000566527 1640 ntBASIC-0.33□□□□□ -2.46
HSPG2P98160 Y_RNA.133-201ENST00000363428 110 ntBASIC-0.33□□□□□ -2.46
HSPG2P98160 SNORA75B-201ENST00000384053 137 ntBASIC-0.33□□□□□ -2.46
HSPG2P98160 RNU6-1179P-201ENST00000384667 107 ntBASIC-0.33□□□□□ -2.46
HSPG2P98160 MIR520C-201ENST00000385005 87 ntBASIC-0.33□□□□□ -2.46
HSPG2P98160 AL079342.2-201ENST00000403367 482 ntBASIC-0.33□□□□□ -2.46
HSPG2P98160 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC-0.33□□□□□ -2.46
HSPG2P98160 BTBD7P2-201ENST00000441962 620 ntBASIC-0.33□□□□□ -2.46
HSPG2P98160 ZNF736P5Y-201ENST00000451173 805 ntBASIC-0.33□□□□□ -2.46
HSPG2P98160 RNU7-136P-201ENST00000458819 69 ntBASIC-0.33□□□□□ -2.46
HSPG2P98160 RNU7-62P-201ENST00000458856 62 ntBASIC-0.33□□□□□ -2.46
HSPG2P98160 RN7SKP19-201ENST00000516016 252 ntBASIC-0.33□□□□□ -2.46
HSPG2P98160 SNORA18.7-201ENST00000516910 131 ntBASIC-0.33□□□□□ -2.46
HSPG2P98160 AL358944.1-201ENST00000528537 144 ntBASIC-0.33□□□□□ -2.46
HSPG2P98160 AC013828.2-201ENST00000532487 235 ntBASIC-0.33□□□□□ -2.46
HSPG2P98160 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC-0.33□□□□□ -2.46
HSPG2P98160 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC-0.33□□□□□ -2.46
HSPG2P98160 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC-0.33□□□□□ -2.46
HSPG2P98160 AC120024.3-201ENST00000603167 156 ntBASIC-0.33□□□□□ -2.46
HSPG2P98160 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC-0.33□□□□□ -2.46
HSPG2P98160 ZNF204P-201ENST00000416749 2397 ntBASIC-0.33□□□□□ -2.46
HSPG2P98160 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.33□□□□□ -2.46
HSPG2P98160 RNU4-21P-201ENST00000362802 126 ntBASIC-0.33□□□□□ -2.46
HSPG2P98160 Y_RNA.370-201ENST00000365589 108 ntBASIC-0.33□□□□□ -2.46
HSPG2P98160 RNU6-1122P-201ENST00000384449 107 ntBASIC-0.33□□□□□ -2.46
HSPG2P98160 RNA5SP482-201ENST00000391269 118 ntBASIC-0.33□□□□□ -2.46
HSPG2P98160 FCF1P9-201ENST00000412546 282 ntBASIC-0.33□□□□□ -2.46
HSPG2P98160 MTND4P24-201ENST00000424002 397 ntBASIC-0.33□□□□□ -2.46
HSPG2P98160 AC005002.2-201ENST00000438228 269 ntBASIC-0.33□□□□□ -2.46
HSPG2P98160 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC-0.33□□□□□ -2.46
HSPG2P98160 SNORA13-201ENST00000458790 133 ntBASIC-0.33□□□□□ -2.46
HSPG2P98160 RNU6-58P-201ENST00000517143 103 ntBASIC-0.33□□□□□ -2.46
HSPG2P98160 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC-0.33□□□□□ -2.46
HSPG2P98160 MTND4P33-201ENST00000556706 766 ntBASIC-0.33□□□□□ -2.46
HSPG2P98160 AL512347.1-201ENST00000566420 503 ntBASIC-0.33□□□□□ -2.46
HSPG2P98160 MIR4771-2-201ENST00000577758 74 ntBASIC-0.33□□□□□ -2.46
HSPG2P98160 MIR4771-1-201ENST00000582617 74 ntBASIC-0.33□□□□□ -2.46
HSPG2P98160 MIR7107-201ENST00000611489 80 ntBASIC-0.33□□□□□ -2.46
HSPG2P98160 AC006441.5-201ENST00000612680 209 ntBASIC-0.33□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 133.9 ms