Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 AC027288.2-201ENST00000553028 243 ntBASIC1.05□□□□□ -2.24
IRX3P78415 AL442163.3-201ENST00000554110 156 ntBASIC1.05□□□□□ -2.24
IRX3P78415 SNORA59B-202ENST00000578183 701 ntBASIC1.05□□□□□ -2.24
IRX3P78415 MIR4661-201ENST00000582720 75 ntBASIC1.05□□□□□ -2.24
IRX3P78415 MIR3672-201ENST00000584290 82 ntBASIC1.05□□□□□ -2.24
IRX3P78415 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.05□□□□□ -2.24
IRX3P78415 U6.73-201ENST00000619194 103 ntBASIC1.05□□□□□ -2.24
IRX3P78415 MIR8065-201ENST00000620577 100 ntBASIC1.05□□□□□ -2.24
IRX3P78415 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.05□□□□□ -2.24
IRX3P78415 RNU1-133P-201ENST00000364867 167 ntBASIC1.04□□□□□ -2.24
IRX3P78415 RNU6-332P-201ENST00000391193 108 ntBASIC1.04□□□□□ -2.24
IRX3P78415 MRPL42P3-201ENST00000401492 326 ntBASIC1.04□□□□□ -2.24
IRX3P78415 RNU7-34P-201ENST00000459394 64 ntBASIC1.04□□□□□ -2.24
IRX3P78415 AC105313.1-201ENST00000509121 353 ntBASIC1.04□□□□□ -2.24
IRX3P78415 SNORD116-28-201ENST00000516123 91 ntBASIC1.04□□□□□ -2.24
IRX3P78415 APOOP3-201ENST00000536787 586 ntBASIC1.04□□□□□ -2.24
IRX3P78415 MIR4273-201ENST00000582824 84 ntBASIC1.04□□□□□ -2.24
IRX3P78415 MIR4653-201ENST00000585107 83 ntBASIC1.04□□□□□ -2.24
IRX3P78415 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.04□□□□□ -2.24
IRX3P78415 AL020996.3-201ENST00000606617 222 ntBASIC1.04□□□□□ -2.24
IRX3P78415 SNORA28-201ENST00000606769 126 ntBASIC1.04□□□□□ -2.24
IRX3P78415 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.04□□□□□ -2.24
IRX3P78415 AC018630.2-201ENST00000534866 2403 ntBASIC1.04□□□□□ -2.24
IRX3P78415 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.04□□□□□ -2.24
IRX3P78415 Y_RNA.179-201ENST00000363844 90 ntBASIC1.03□□□□□ -2.24
IRX3P78415 RNU6-1031P-201ENST00000384773 107 ntBASIC1.03□□□□□ -2.24
IRX3P78415 RNU6-1105P-201ENST00000384774 107 ntBASIC1.03□□□□□ -2.24
IRX3P78415 RNA5SP467-201ENST00000391274 118 ntBASIC1.03□□□□□ -2.24
IRX3P78415 AL034345.1-201ENST00000407768 123 ntBASIC1.03□□□□□ -2.24
IRX3P78415 RNA5SP504-201ENST00000410676 117 ntBASIC1.03□□□□□ -2.24
IRX3P78415 AC016909.1-201ENST00000415916 166 ntBASIC1.03□□□□□ -2.24
IRX3P78415 AC243428.1-201ENST00000421099 264 ntBASIC1.03□□□□□ -2.24
IRX3P78415 MTND2P22-201ENST00000444325 1033 ntBASIC1.03□□□□□ -2.24
IRX3P78415 RPL39P38-201ENST00000467018 153 ntBASIC1.03□□□□□ -2.24
IRX3P78415 RN7SKP49-201ENST00000516675 260 ntBASIC1.03□□□□□ -2.24
IRX3P78415 AL590705.4-201ENST00000532209 134 ntBASIC1.03□□□□□ -2.24
IRX3P78415 AL512310.8-201ENST00000550183 120 ntBASIC1.03□□□□□ -2.24
IRX3P78415 MIR4742-201ENST00000581069 85 ntBASIC1.03□□□□□ -2.24
IRX3P78415 AC097065.2-201ENST00000608159 533 ntBASIC1.03□□□□□ -2.24
IRX3P78415 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.03□□□□□ -2.24
IRX3P78415 AL513423.1-201ENST00000621695 132 ntBASIC1.03□□□□□ -2.24
IRX3P78415 AC099654.5-201ENST00000636479 350 ntBASIC1.03□□□□□ -2.24
IRX3P78415 ZNF299P-201ENST00000406845 1804 ntBASIC1.03□□□□□ -2.25
IRX3P78415 Y_RNA.38-201ENST00000362617 102 ntBASIC1.02□□□□□ -2.25
IRX3P78415 RNU6-873P-201ENST00000363833 107 ntBASIC1.02□□□□□ -2.25
IRX3P78415 RNU1-36P-201ENST00000365130 165 ntBASIC1.02□□□□□ -2.25
IRX3P78415 Y_RNA.393-201ENST00000383936 102 ntBASIC1.02□□□□□ -2.25
IRX3P78415 AC010154.1-201ENST00000425857 269 ntBASIC1.02□□□□□ -2.25
IRX3P78415 MTATP6P13-201ENST00000438531 667 ntBASIC1.02□□□□□ -2.25
IRX3P78415 MTATP6P26-201ENST00000445926 662 ntBASIC1.02□□□□□ -2.25
IRX3P78415 RNU6-1132P-201ENST00000459214 107 ntBASIC1.02□□□□□ -2.25
IRX3P78415 RPL30P10-201ENST00000488148 337 ntBASIC1.02□□□□□ -2.25
IRX3P78415 MTND4P12-201ENST00000498999 1377 ntBASIC1.02□□□□□ -2.25
IRX3P78415 RNU6-864P-201ENST00000516256 108 ntBASIC1.02□□□□□ -2.25
IRX3P78415 AL121579.1-201ENST00000555129 305 ntBASIC1.02□□□□□ -2.25
IRX3P78415 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.02□□□□□ -2.25
IRX3P78415 AC011712.1-201ENST00000588959 234 ntBASIC1.02□□□□□ -2.25
IRX3P78415 MZT1P2-201ENST00000604387 248 ntBASIC1.02□□□□□ -2.25
IRX3P78415 AC108706.1-201ENST00000611053 297 ntBASIC1.02□□□□□ -2.25
IRX3P78415 HSBP1P2-201ENST00000299671 229 ntBASIC1.01□□□□□ -2.25
IRX3P78415 SNORA4.2-201ENST00000365313 147 ntBASIC1.01□□□□□ -2.25
IRX3P78415 RNU6-780P-201ENST00000391030 104 ntBASIC1.01□□□□□ -2.25
IRX3P78415 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.01□□□□□ -2.25
IRX3P78415 AL139396.1-201ENST00000421137 167 ntBASIC1.01□□□□□ -2.25
IRX3P78415 AC093534.1-201ENST00000504977 132 ntBASIC1.01□□□□□ -2.25
IRX3P78415 AC103851.1-201ENST00000506833 274 ntBASIC1.01□□□□□ -2.25
IRX3P78415 RNU1-54P-201ENST00000517181 120 ntBASIC1.01□□□□□ -2.25
IRX3P78415 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.01□□□□□ -2.25
IRX3P78415 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC1.01□□□□□ -2.25
IRX3P78415 EIF1P4-201ENST00000572664 335 ntBASIC1.01□□□□□ -2.25
IRX3P78415 MIR3664-201ENST00000579074 99 ntBASIC1.01□□□□□ -2.25
IRX3P78415 AL513534.2-201ENST00000603836 250 ntBASIC1.01□□□□□ -2.25
IRX3P78415 AC100812.1-201ENST00000607622 580 ntBASIC1.01□□□□□ -2.25
IRX3P78415 AC103591.3-201ENST00000608684 209 ntBASIC1.01□□□□□ -2.25
IRX3P78415 AC010999.1-201ENST00000611856 324 ntBASIC1.01□□□□□ -2.25
IRX3P78415 AC009248.2-201ENST00000619826 254 ntBASIC1.01□□□□□ -2.25
IRX3P78415 U6.108-201ENST00000637764 58 ntBASIC1.01□□□□□ -2.25
IRX3P78415 AC024614.3-201ENST00000637860 256 ntBASIC1.01□□□□□ -2.25
IRX3P78415 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
IRX3P78415 Y_RNA.184-201ENST00000363884 108 ntBASIC1□□□□□ -2.25
IRX3P78415 RNU6-595P-201ENST00000363944 107 ntBASIC1□□□□□ -2.25
IRX3P78415 RNA5SP259-201ENST00000365541 109 ntBASIC1□□□□□ -2.25
IRX3P78415 RNU6-331P-201ENST00000384724 107 ntBASIC1□□□□□ -2.25
IRX3P78415 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1□□□□□ -2.25
IRX3P78415 Z82188.1-201ENST00000436709 154 ntBASIC1□□□□□ -2.25
IRX3P78415 MTCO2P7-201ENST00000446518 666 ntBASIC1□□□□□ -2.25
IRX3P78415 AC010598.1-201ENST00000510378 103 ntBASIC1□□□□□ -2.25
IRX3P78415 RNU7-28P-201ENST00000516759 62 ntBASIC1□□□□□ -2.25
IRX3P78415 MIR8054-201ENST00000620877 86 ntBASIC1□□□□□ -2.25
IRX3P78415 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1□□□□□ -2.25
IRX3P78415 RNU6-1252P-201ENST00000363054 104 ntBASIC0.99□□□□□ -2.25
IRX3P78415 RNU6-440P-201ENST00000390882 105 ntBASIC0.99□□□□□ -2.25
IRX3P78415 RNA5SP109-201ENST00000391010 116 ntBASIC0.99□□□□□ -2.25
IRX3P78415 MTCYBP4-201ENST00000401524 249 ntBASIC0.99□□□□□ -2.25
IRX3P78415 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.99□□□□□ -2.25
IRX3P78415 MTCO3P19-201ENST00000415864 321 ntBASIC0.99□□□□□ -2.25
IRX3P78415 AL590632.1-201ENST00000424289 371 ntBASIC0.99□□□□□ -2.25
IRX3P78415 AC245047.3-201ENST00000429428 127 ntBASIC0.99□□□□□ -2.25
IRX3P78415 MTND4P18-201ENST00000447010 465 ntBASIC0.99□□□□□ -2.25
IRX3P78415 SUMO1P2-201ENST00000452524 304 ntBASIC0.99□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 125.6 ms