Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3.34□□□□□ -1.87
CHMP4BP1P59074 RPL17P51-201ENST00000605218 238 ntBASIC3.34□□□□□ -1.87
CHMP4BP1P59074 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.34□□□□□ -1.88
CHMP4BP1P59074 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
CHMP4BP1P59074 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
CHMP4BP1P59074 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
CHMP4BP1P59074 AL136360.1-201ENST00000503377 1900 ntBASIC3.33□□□□□ -1.88
CHMP4BP1P59074 RNU4-84P-201ENST00000364200 139 ntBASIC3.33□□□□□ -1.88
CHMP4BP1P59074 SNORD14D-201ENST00000384390 87 ntBASIC3.33□□□□□ -1.88
CHMP4BP1P59074 MIR626-201ENST00000385032 94 ntBASIC3.33□□□□□ -1.88
CHMP4BP1P59074 MIR1294-201ENST00000408503 142 ntBASIC3.33□□□□□ -1.88
CHMP4BP1P59074 RNU2-63P-201ENST00000410792 194 ntBASIC3.33□□□□□ -1.88
CHMP4BP1P59074 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CHMP4BP1P59074 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.33□□□□□ -1.88
CHMP4BP1P59074 Y_RNA.23-201ENST00000362496 106 ntBASIC3.32□□□□□ -1.88
CHMP4BP1P59074 Y_RNA.287-201ENST00000364853 94 ntBASIC3.32□□□□□ -1.88
CHMP4BP1P59074 Y_RNA.291-201ENST00000364886 113 ntBASIC3.32□□□□□ -1.88
CHMP4BP1P59074 RNU6-275P-201ENST00000364910 107 ntBASIC3.32□□□□□ -1.88
CHMP4BP1P59074 Y_RNA.341-201ENST00000365341 102 ntBASIC3.32□□□□□ -1.88
CHMP4BP1P59074 SNORD116-13-201ENST00000384408 92 ntBASIC3.32□□□□□ -1.88
CHMP4BP1P59074 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
CHMP4BP1P59074 AC016717.1-201ENST00000448918 286 ntBASIC3.32□□□□□ -1.88
CHMP4BP1P59074 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC3.32□□□□□ -1.88
CHMP4BP1P59074 SNORD116-25-201ENST00000516517 92 ntBASIC3.32□□□□□ -1.88
CHMP4BP1P59074 RNU5F-4P-201ENST00000516581 114 ntBASIC3.32□□□□□ -1.88
CHMP4BP1P59074 MIR4319-201ENST00000577285 85 ntBASIC3.32□□□□□ -1.88
CHMP4BP1P59074 MIR4672-201ENST00000583126 81 ntBASIC3.32□□□□□ -1.88
CHMP4BP1P59074 AC025754.2-201ENST00000606491 432 ntBASIC3.32□□□□□ -1.88
CHMP4BP1P59074 AC007318.2-201ENST00000620999 243 ntBASIC3.32□□□□□ -1.88
CHMP4BP1P59074 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CHMP4BP1P59074 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CHMP4BP1P59074 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
CHMP4BP1P59074 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
CHMP4BP1P59074 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.31□□□□□ -1.88
CHMP4BP1P59074 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CHMP4BP1P59074 Y_RNA.24-201ENST00000362508 103 ntBASIC3.31□□□□□ -1.88
CHMP4BP1P59074 Y_RNA.121-201ENST00000363309 113 ntBASIC3.31□□□□□ -1.88
CHMP4BP1P59074 RNU6-312P-201ENST00000364629 107 ntBASIC3.31□□□□□ -1.88
CHMP4BP1P59074 RNU6-81P-201ENST00000365608 104 ntBASIC3.31□□□□□ -1.88
CHMP4BP1P59074 MIR181B1-201ENST00000385240 110 ntBASIC3.31□□□□□ -1.88
CHMP4BP1P59074 MIR1283-1-201ENST00000408494 87 ntBASIC3.31□□□□□ -1.88
CHMP4BP1P59074 AC105272.1-201ENST00000438604 198 ntBASIC3.31□□□□□ -1.88
CHMP4BP1P59074 RNU7-14P-201ENST00000459331 62 ntBASIC3.31□□□□□ -1.88
CHMP4BP1P59074 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC3.31□□□□□ -1.88
CHMP4BP1P59074 ELOCP29-201ENST00000588193 334 ntBASIC3.31□□□□□ -1.88
CHMP4BP1P59074 AL355297.2-201ENST00000604792 129 ntBASIC3.31□□□□□ -1.88
CHMP4BP1P59074 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC3.31□□□□□ -1.88
CHMP4BP1P59074 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.3□□□□□ -1.88
CHMP4BP1P59074 RNA5SP125-201ENST00000364843 120 ntBASIC3.3□□□□□ -1.88
CHMP4BP1P59074 Y_RNA.293-201ENST00000364908 93 ntBASIC3.3□□□□□ -1.88
CHMP4BP1P59074 SNORA20B-201ENST00000384220 132 ntBASIC3.3□□□□□ -1.88
CHMP4BP1P59074 MT-TT-201ENST00000387460 66 ntBASIC3.3□□□□□ -1.88
CHMP4BP1P59074 AL355497.1-201ENST00000406262 551 ntBASIC3.3□□□□□ -1.88
CHMP4BP1P59074 RNA5SP274-201ENST00000410484 108 ntBASIC3.3□□□□□ -1.88
CHMP4BP1P59074 AL121890.1-201ENST00000435457 205 ntBASIC3.3□□□□□ -1.88
CHMP4BP1P59074 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.3□□□□□ -1.88
CHMP4BP1P59074 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.3□□□□□ -1.88
CHMP4BP1P59074 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC3.3□□□□□ -1.88
CHMP4BP1P59074 RPS20P10-201ENST00000451209 253 ntBASIC3.3□□□□□ -1.88
CHMP4BP1P59074 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.3□□□□□ -1.88
CHMP4BP1P59074 RNA5SP76-201ENST00000516277 87 ntBASIC3.3□□□□□ -1.88
CHMP4BP1P59074 SNORA48.11-201ENST00000517015 89 ntBASIC3.3□□□□□ -1.88
CHMP4BP1P59074 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC3.3□□□□□ -1.88
CHMP4BP1P59074 AC012640.5-201ENST00000623897 319 ntBASIC3.3□□□□□ -1.88
CHMP4BP1P59074 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CHMP4BP1P59074 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.3□□□□□ -1.88
CHMP4BP1P59074 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CHMP4BP1P59074 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CHMP4BP1P59074 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
CHMP4BP1P59074 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.29□□□□□ -1.88
CHMP4BP1P59074 Z82209.1-201ENST00000422141 2135 ntBASIC3.29□□□□□ -1.88
CHMP4BP1P59074 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
CHMP4BP1P59074 U8.7-201ENST00000364940 136 ntBASIC3.29□□□□□ -1.88
CHMP4BP1P59074 RNU6-234P-201ENST00000365229 104 ntBASIC3.29□□□□□ -1.88
CHMP4BP1P59074 RNU6-969P-201ENST00000383900 105 ntBASIC3.29□□□□□ -1.88
CHMP4BP1P59074 Y_RNA.456-201ENST00000384232 111 ntBASIC3.29□□□□□ -1.88
CHMP4BP1P59074 RNU6-301P-201ENST00000384277 107 ntBASIC3.29□□□□□ -1.88
CHMP4BP1P59074 AC087499.2-201ENST00000432861 149 ntBASIC3.29□□□□□ -1.88
CHMP4BP1P59074 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC3.29□□□□□ -1.88
CHMP4BP1P59074 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC3.29□□□□□ -1.88
CHMP4BP1P59074 RNU7-57P-201ENST00000459540 60 ntBASIC3.29□□□□□ -1.88
CHMP4BP1P59074 RN7SL20P-201ENST00000488827 297 ntBASIC3.29□□□□□ -1.88
CHMP4BP1P59074 RN7SL633P-201ENST00000488974 297 ntBASIC3.29□□□□□ -1.88
CHMP4BP1P59074 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.29□□□□□ -1.88
CHMP4BP1P59074 AL449363.1-201ENST00000617815 186 ntBASIC3.29□□□□□ -1.88
CHMP4BP1P59074 MIR1248-201ENST00000629190 106 ntBASIC3.29□□□□□ -1.88
CHMP4BP1P59074 MIR3658-201ENST00000636291 56 ntBASIC3.29□□□□□ -1.88
CHMP4BP1P59074 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
CHMP4BP1P59074 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.29□□□□□ -1.88
CHMP4BP1P59074 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CHMP4BP1P59074 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CHMP4BP1P59074 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.28□□□□□ -1.88
CHMP4BP1P59074 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.28□□□□□ -1.88
CHMP4BP1P59074 RNU1-23P-201ENST00000363361 144 ntBASIC3.28□□□□□ -1.88
CHMP4BP1P59074 RNA5SP126-201ENST00000365092 109 ntBASIC3.28□□□□□ -1.88
CHMP4BP1P59074 RNU6-546P-201ENST00000383991 107 ntBASIC3.28□□□□□ -1.88
CHMP4BP1P59074 RNU6-578P-201ENST00000390980 103 ntBASIC3.28□□□□□ -1.88
CHMP4BP1P59074 RNU2-32P-201ENST00000411193 191 ntBASIC3.28□□□□□ -1.88
CHMP4BP1P59074 AL139281.1-201ENST00000422120 335 ntBASIC3.28□□□□□ -1.88
CHMP4BP1P59074 AC104389.3-201ENST00000445629 235 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms