Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
RHBDL3P58872 RNA5SP190-201ENST00000365222 118 ntBASIC2.15□□□□□ -2.07
RHBDL3P58872 RNA5SP37-201ENST00000365420 130 ntBASIC2.15□□□□□ -2.07
RHBDL3P58872 RNU6-318P-201ENST00000384283 103 ntBASIC2.15□□□□□ -2.07
RHBDL3P58872 MIR628-201ENST00000385229 95 ntBASIC2.15□□□□□ -2.07
RHBDL3P58872 SNORD12B-201ENST00000410433 91 ntBASIC2.15□□□□□ -2.07
RHBDL3P58872 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.15□□□□□ -2.07
RHBDL3P58872 AC073910.1-201ENST00000445047 438 ntBASIC2.15□□□□□ -2.07
RHBDL3P58872 U8.22-201ENST00000459141 133 ntBASIC2.15□□□□□ -2.07
RHBDL3P58872 SNORD13-201ENST00000459299 104 ntBASIC2.15□□□□□ -2.07
RHBDL3P58872 AL163195.1-201ENST00000496941 348 ntBASIC2.15□□□□□ -2.07
RHBDL3P58872 RNU6-911P-201ENST00000516523 104 ntBASIC2.15□□□□□ -2.07
RHBDL3P58872 AC087588.2-201ENST00000617667 426 ntBASIC2.15□□□□□ -2.07
RHBDL3P58872 MTND4LP32-201ENST00000636111 270 ntBASIC2.15□□□□□ -2.07
RHBDL3P58872 MIR3674-201ENST00000636576 68 ntBASIC2.15□□□□□ -2.07
RHBDL3P58872 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.15□□□□□ -2.07
RHBDL3P58872 MIR424-201ENST00000362227 98 ntBASIC2.14□□□□□ -2.07
RHBDL3P58872 Y_RNA.140-201ENST00000363474 103 ntBASIC2.14□□□□□ -2.07
RHBDL3P58872 RNU6-1040P-201ENST00000383974 107 ntBASIC2.14□□□□□ -2.07
RHBDL3P58872 RNU6-439P-201ENST00000384188 106 ntBASIC2.14□□□□□ -2.07
RHBDL3P58872 RNU6-1186P-201ENST00000410429 97 ntBASIC2.14□□□□□ -2.07
RHBDL3P58872 RNU6-1304P-201ENST00000411374 106 ntBASIC2.14□□□□□ -2.07
RHBDL3P58872 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.14□□□□□ -2.07
RHBDL3P58872 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.14□□□□□ -2.07
RHBDL3P58872 RPS27P22-201ENST00000478056 241 ntBASIC2.14□□□□□ -2.07
RHBDL3P58872 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.14□□□□□ -2.07
RHBDL3P58872 MIR4438-201ENST00000585271 93 ntBASIC2.14□□□□□ -2.07
RHBDL3P58872 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC2.14□□□□□ -2.07
RHBDL3P58872 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
RHBDL3P58872 SNORA33-201ENST00000363664 130 ntBASIC2.13□□□□□ -2.07
RHBDL3P58872 Y_RNA.187-201ENST00000363918 113 ntBASIC2.13□□□□□ -2.07
RHBDL3P58872 Y_RNA.314-201ENST00000365114 102 ntBASIC2.13□□□□□ -2.07
RHBDL3P58872 Y_RNA.356-201ENST00000365475 113 ntBASIC2.13□□□□□ -2.07
RHBDL3P58872 MIR562-201ENST00000384894 95 ntBASIC2.13□□□□□ -2.07
RHBDL3P58872 MTCO3P19-201ENST00000415864 321 ntBASIC2.13□□□□□ -2.07
RHBDL3P58872 RAB28P5-201ENST00000427490 651 ntBASIC2.13□□□□□ -2.07
RHBDL3P58872 AC108667.1-201ENST00000428618 249 ntBASIC2.13□□□□□ -2.07
RHBDL3P58872 MRPS10P1-201ENST00000448483 130 ntBASIC2.13□□□□□ -2.07
RHBDL3P58872 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.13□□□□□ -2.07
RHBDL3P58872 AL357075.2-201ENST00000614906 189 ntBASIC2.13□□□□□ -2.07
RHBDL3P58872 AC084781.2-201ENST00000615568 161 ntBASIC2.13□□□□□ -2.07
RHBDL3P58872 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
RHBDL3P58872 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
RHBDL3P58872 SNORD33-201ENST00000362761 85 ntBASIC2.12□□□□□ -2.07
RHBDL3P58872 RNU6-457P-201ENST00000363999 107 ntBASIC2.12□□□□□ -2.07
RHBDL3P58872 RNY3P4-201ENST00000384428 101 ntBASIC2.12□□□□□ -2.07
RHBDL3P58872 SNORD116-29-201ENST00000384516 83 ntBASIC2.12□□□□□ -2.07
RHBDL3P58872 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC2.12□□□□□ -2.07
RHBDL3P58872 HSPE1P21-201ENST00000438283 308 ntBASIC2.12□□□□□ -2.07
RHBDL3P58872 FCF1P4-201ENST00000448326 183 ntBASIC2.12□□□□□ -2.07
RHBDL3P58872 RNU7-152P-201ENST00000458982 64 ntBASIC2.12□□□□□ -2.07
RHBDL3P58872 Y_RNA.632-201ENST00000459189 102 ntBASIC2.12□□□□□ -2.07
RHBDL3P58872 SNORD19B-201ENST00000459623 84 ntBASIC2.12□□□□□ -2.07
RHBDL3P58872 AC010469.2-201ENST00000496412 480 ntBASIC2.12□□□□□ -2.07
RHBDL3P58872 AC105758.1-201ENST00000506038 399 ntBASIC2.12□□□□□ -2.07
RHBDL3P58872 SNORA25.15-201ENST00000516487 89 ntBASIC2.12□□□□□ -2.07
RHBDL3P58872 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.12□□□□□ -2.07
RHBDL3P58872 AL442163.3-201ENST00000554110 156 ntBASIC2.12□□□□□ -2.07
RHBDL3P58872 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.12□□□□□ -2.07
RHBDL3P58872 MIR4422-201ENST00000581938 83 ntBASIC2.12□□□□□ -2.07
RHBDL3P58872 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
RHBDL3P58872 Y_RNA.146-201ENST00000363549 102 ntBASIC2.11□□□□□ -2.07
RHBDL3P58872 SNORA16.1-201ENST00000364597 132 ntBASIC2.11□□□□□ -2.07
RHBDL3P58872 Y_RNA.428-201ENST00000384078 102 ntBASIC2.11□□□□□ -2.07
RHBDL3P58872 CBX3P4-201ENST00000538909 354 ntBASIC2.11□□□□□ -2.07
RHBDL3P58872 RPL21P9-201ENST00000556149 474 ntBASIC2.11□□□□□ -2.07
RHBDL3P58872 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.11□□□□□ -2.07
RHBDL3P58872 AL138825.1-201ENST00000618587 192 ntBASIC2.11□□□□□ -2.07
RHBDL3P58872 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC2.11□□□□□ -2.07
RHBDL3P58872 AC100821.1-201ENST00000523153 2479 ntBASIC2.11□□□□□ -2.07
RHBDL3P58872 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
RHBDL3P58872 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
RHBDL3P58872 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.1□□□□□ -2.07
RHBDL3P58872 RNY3P14-201ENST00000384309 102 ntBASIC2.1□□□□□ -2.07
RHBDL3P58872 SNORD78.2-201ENST00000391076 69 ntBASIC2.1□□□□□ -2.07
RHBDL3P58872 RN7SKP200-201ENST00000410564 320 ntBASIC2.1□□□□□ -2.07
RHBDL3P58872 RNU7-34P-201ENST00000459394 64 ntBASIC2.1□□□□□ -2.07
RHBDL3P58872 RNU6-120P-201ENST00000516077 103 ntBASIC2.1□□□□□ -2.07
RHBDL3P58872 SNORD116.3-201ENST00000517176 78 ntBASIC2.1□□□□□ -2.07
RHBDL3P58872 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.1□□□□□ -2.07
RHBDL3P58872 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.1□□□□□ -2.07
RHBDL3P58872 AC016925.2-201ENST00000605108 242 ntBASIC2.1□□□□□ -2.07
RHBDL3P58872 U2.1-201ENST00000618978 145 ntBASIC2.1□□□□□ -2.07
RHBDL3P58872 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC2.1□□□□□ -2.07
RHBDL3P58872 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
RHBDL3P58872 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
RHBDL3P58872 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.09□□□□□ -2.07
RHBDL3P58872 SNORD114-7-201ENST00000362520 77 ntBASIC2.09□□□□□ -2.07
RHBDL3P58872 RNA5SP138-201ENST00000365098 114 ntBASIC2.09□□□□□ -2.07
RHBDL3P58872 RNU6-338P-201ENST00000383888 105 ntBASIC2.09□□□□□ -2.07
RHBDL3P58872 Y_RNA.529-201ENST00000384586 119 ntBASIC2.09□□□□□ -2.07
RHBDL3P58872 MIR559-201ENST00000385188 96 ntBASIC2.09□□□□□ -2.07
RHBDL3P58872 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.09□□□□□ -2.07
RHBDL3P58872 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.09□□□□□ -2.07
RHBDL3P58872 SNORA77B-201ENST00000578179 125 ntBASIC2.09□□□□□ -2.07
RHBDL3P58872 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.09□□□□□ -2.07
RHBDL3P58872 AL162424.1-201ENST00000602325 221 ntBASIC2.09□□□□□ -2.07
RHBDL3P58872 U6.108-201ENST00000637764 58 ntBASIC2.09□□□□□ -2.07
RHBDL3P58872 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
RHBDL3P58872 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 193.7 ms