Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AC005786.1-201ENST00000588553 154 ntBASIC1.91□□□□□ -2.1
CLDN20P56880 AC078899.2-201ENST00000595282 212 ntBASIC1.91□□□□□ -2.1
CLDN20P56880 AC004467.1-201ENST00000615678 330 ntBASIC1.91□□□□□ -2.1
CLDN20P56880 AC091932.3-201ENST00000624223 323 ntBASIC1.91□□□□□ -2.1
CLDN20P56880 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
CLDN20P56880 RNA5SP160-201ENST00000364866 120 ntBASIC1.9□□□□□ -2.11
CLDN20P56880 SNORD63-201ENST00000384262 68 ntBASIC1.9□□□□□ -2.11
CLDN20P56880 Y_RNA.570-201ENST00000384750 101 ntBASIC1.9□□□□□ -2.11
CLDN20P56880 SNORA48.3-201ENST00000391081 134 ntBASIC1.9□□□□□ -2.11
CLDN20P56880 HMGN2P3-201ENST00000433603 273 ntBASIC1.9□□□□□ -2.11
CLDN20P56880 HMGN2P5-201ENST00000436882 273 ntBASIC1.9□□□□□ -2.11
CLDN20P56880 RNU6-897P-201ENST00000517135 105 ntBASIC1.9□□□□□ -2.11
CLDN20P56880 RNU2-12P-201ENST00000517216 168 ntBASIC1.9□□□□□ -2.11
CLDN20P56880 AP005660.1-201ENST00000522972 293 ntBASIC1.9□□□□□ -2.11
CLDN20P56880 AC131281.1-201ENST00000522984 164 ntBASIC1.9□□□□□ -2.11
CLDN20P56880 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.9□□□□□ -2.11
CLDN20P56880 AC055872.1-201ENST00000570978 278 ntBASIC1.9□□□□□ -2.11
CLDN20P56880 AL353149.1-201ENST00000610667 244 ntBASIC1.9□□□□□ -2.11
CLDN20P56880 U2.15-201ENST00000611544 191 ntBASIC1.9□□□□□ -2.11
CLDN20P56880 U2.16-201ENST00000613119 191 ntBASIC1.9□□□□□ -2.11
CLDN20P56880 U2.12-201ENST00000613778 191 ntBASIC1.9□□□□□ -2.11
CLDN20P56880 U2.20-201ENST00000613956 192 ntBASIC1.9□□□□□ -2.11
CLDN20P56880 U2.9-201ENST00000615427 191 ntBASIC1.9□□□□□ -2.11
CLDN20P56880 U2.11-201ENST00000616345 191 ntBASIC1.9□□□□□ -2.11
CLDN20P56880 U2.2-201ENST00000616535 191 ntBASIC1.9□□□□□ -2.11
CLDN20P56880 U2.3-201ENST00000617785 191 ntBASIC1.9□□□□□ -2.11
CLDN20P56880 U2.19-201ENST00000618602 191 ntBASIC1.9□□□□□ -2.11
CLDN20P56880 RNU2-1-201ENST00000618664 191 ntBASIC1.9□□□□□ -2.11
CLDN20P56880 U2.6-201ENST00000619225 191 ntBASIC1.9□□□□□ -2.11
CLDN20P56880 U2.5-201ENST00000619465 191 ntBASIC1.9□□□□□ -2.11
CLDN20P56880 U2.10-201ENST00000620268 191 ntBASIC1.9□□□□□ -2.11
CLDN20P56880 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.11
CLDN20P56880 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
CLDN20P56880 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.89□□□□□ -2.11
CLDN20P56880 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.89□□□□□ -2.11
CLDN20P56880 MIR597-201ENST00000384968 97 ntBASIC1.89□□□□□ -2.11
CLDN20P56880 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
CLDN20P56880 MIR1253-201ENST00000408273 105 ntBASIC1.89□□□□□ -2.11
CLDN20P56880 MIR1261-201ENST00000408659 82 ntBASIC1.89□□□□□ -2.11
CLDN20P56880 RNU2-40P-201ENST00000410833 196 ntBASIC1.89□□□□□ -2.11
CLDN20P56880 RNA5SP450-201ENST00000411206 102 ntBASIC1.89□□□□□ -2.11
CLDN20P56880 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.89□□□□□ -2.11
CLDN20P56880 MTND2P29-201ENST00000438595 412 ntBASIC1.89□□□□□ -2.11
CLDN20P56880 SUMO1P2-201ENST00000452524 304 ntBASIC1.89□□□□□ -2.11
CLDN20P56880 AC055731.1-201ENST00000474387 401 ntBASIC1.89□□□□□ -2.11
CLDN20P56880 AC010655.3-201ENST00000478818 450 ntBASIC1.89□□□□□ -2.11
CLDN20P56880 RNU6-1041P-201ENST00000516254 102 ntBASIC1.89□□□□□ -2.11
CLDN20P56880 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.89□□□□□ -2.11
CLDN20P56880 AL360085.1-201ENST00000604713 532 ntBASIC1.89□□□□□ -2.11
CLDN20P56880 AC006435.5-201ENST00000624486 112 ntBASIC1.89□□□□□ -2.11
CLDN20P56880 MIR219B-201ENST00000637023 88 ntBASIC1.89□□□□□ -2.11
CLDN20P56880 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.88□□□□□ -2.11
CLDN20P56880 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.88□□□□□ -2.11
CLDN20P56880 AC245060.5-201ENST00000610778 3293 ntBASIC1.88□□□□□ -2.11
CLDN20P56880 snoU2-30.2-201ENST00000362805 70 ntBASIC1.88□□□□□ -2.11
CLDN20P56880 Y_RNA.101-201ENST00000363154 102 ntBASIC1.88□□□□□ -2.11
CLDN20P56880 Y_RNA.143-201ENST00000363520 106 ntBASIC1.88□□□□□ -2.11
CLDN20P56880 Y_RNA.162-201ENST00000363683 102 ntBASIC1.88□□□□□ -2.11
CLDN20P56880 Y_RNA.243-201ENST00000364481 109 ntBASIC1.88□□□□□ -2.11
CLDN20P56880 RNU6-1175P-201ENST00000365200 107 ntBASIC1.88□□□□□ -2.11
CLDN20P56880 RNU6-937P-201ENST00000384325 106 ntBASIC1.88□□□□□ -2.11
CLDN20P56880 RNU2-54P-201ENST00000410299 190 ntBASIC1.88□□□□□ -2.11
CLDN20P56880 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.88□□□□□ -2.11
CLDN20P56880 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.88□□□□□ -2.11
CLDN20P56880 SNORD65B-201ENST00000459126 73 ntBASIC1.88□□□□□ -2.11
CLDN20P56880 MRPS35P2-201ENST00000508242 191 ntBASIC1.88□□□□□ -2.11
CLDN20P56880 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.88□□□□□ -2.11
CLDN20P56880 AC010598.1-201ENST00000510378 103 ntBASIC1.88□□□□□ -2.11
CLDN20P56880 SNORA40.15-201ENST00000516884 107 ntBASIC1.88□□□□□ -2.11
CLDN20P56880 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.88□□□□□ -2.11
CLDN20P56880 AC007229.1-201ENST00000590455 412 ntBASIC1.88□□□□□ -2.11
CLDN20P56880 AC008737.2-201ENST00000599446 118 ntBASIC1.88□□□□□ -2.11
CLDN20P56880 AC006380.1-201ENST00000603598 186 ntBASIC1.88□□□□□ -2.11
CLDN20P56880 AC022441.3-201ENST00000605737 136 ntBASIC1.88□□□□□ -2.11
CLDN20P56880 AC005828.6-201ENST00000606610 232 ntBASIC1.88□□□□□ -2.11
CLDN20P56880 AC116312.1-201ENST00000606841 314 ntBASIC1.88□□□□□ -2.11
CLDN20P56880 AC022513.1-201ENST00000624512 117 ntBASIC1.88□□□□□ -2.11
CLDN20P56880 U6.115-201ENST00000636045 103 ntBASIC1.88□□□□□ -2.11
CLDN20P56880 MIR338-201ENST00000636369 67 ntBASIC1.88□□□□□ -2.11
CLDN20P56880 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.88□□□□□ -2.11
CLDN20P56880 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
CLDN20P56880 Y_RNA.210-201ENST00000364161 110 ntBASIC1.87□□□□□ -2.11
CLDN20P56880 U3.40-201ENST00000408706 208 ntBASIC1.87□□□□□ -2.11
CLDN20P56880 HMGN2P34-201ENST00000437647 269 ntBASIC1.87□□□□□ -2.11
CLDN20P56880 RPS27P21-201ENST00000486977 252 ntBASIC1.87□□□□□ -2.11
CLDN20P56880 YWHAEP4-201ENST00000505390 198 ntBASIC1.87□□□□□ -2.11
CLDN20P56880 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
CLDN20P56880 RNU6-1046P-201ENST00000516538 107 ntBASIC1.87□□□□□ -2.11
CLDN20P56880 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.87□□□□□ -2.11
CLDN20P56880 AC008749.1-201ENST00000597650 306 ntBASIC1.87□□□□□ -2.11
CLDN20P56880 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.87□□□□□ -2.11
CLDN20P56880 MIR376A1-201ENST00000616574 68 ntBASIC1.87□□□□□ -2.11
CLDN20P56880 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.86□□□□□ -2.11
CLDN20P56880 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.86□□□□□ -2.11
CLDN20P56880 Y_RNA.214-201ENST00000364201 112 ntBASIC1.86□□□□□ -2.11
CLDN20P56880 Y_RNA.287-201ENST00000364853 94 ntBASIC1.86□□□□□ -2.11
CLDN20P56880 Y_RNA.446-201ENST00000384178 104 ntBASIC1.86□□□□□ -2.11
CLDN20P56880 RPL21P1-201ENST00000399532 476 ntBASIC1.86□□□□□ -2.11
CLDN20P56880 AL117342.1-201ENST00000404861 406 ntBASIC1.86□□□□□ -2.11
CLDN20P56880 SUMO2P12-201ENST00000405924 140 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 165.2 ms