Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 TTK-211ENST00000627129 240 ntTSL 5 BASIC2.34□□□□□ -2.03
SUMO3P55854 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.34□□□□□ -2.04
SUMO3P55854 MIR335-201ENST00000362173 94 ntBASIC2.33□□□□□ -2.04
SUMO3P55854 SNORA5B-201ENST00000363786 132 ntBASIC2.33□□□□□ -2.04
SUMO3P55854 Y_RNA.288-201ENST00000364854 92 ntBASIC2.33□□□□□ -2.04
SUMO3P55854 RNU6-417P-201ENST00000384712 107 ntBASIC2.33□□□□□ -2.04
SUMO3P55854 RNU6-1248P-201ENST00000391096 64 ntBASIC2.33□□□□□ -2.04
SUMO3P55854 CST2P1-201ENST00000425770 87 ntBASIC2.33□□□□□ -2.04
SUMO3P55854 AC010154.1-201ENST00000425857 269 ntBASIC2.33□□□□□ -2.04
SUMO3P55854 AC011753.1-201ENST00000451001 220 ntBASIC2.33□□□□□ -2.04
SUMO3P55854 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.33□□□□□ -2.04
SUMO3P55854 RPS27P22-201ENST00000478056 241 ntBASIC2.33□□□□□ -2.04
SUMO3P55854 RNA5SP20-201ENST00000515976 84 ntBASIC2.33□□□□□ -2.04
SUMO3P55854 AP005660.1-201ENST00000522972 293 ntBASIC2.33□□□□□ -2.04
SUMO3P55854 AC027419.1-201ENST00000522976 328 ntBASIC2.33□□□□□ -2.04
SUMO3P55854 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.33□□□□□ -2.04
SUMO3P55854 AC004817.2-201ENST00000561794 651 ntBASIC2.33□□□□□ -2.04
SUMO3P55854 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.33□□□□□ -2.04
SUMO3P55854 U6.73-201ENST00000619194 103 ntBASIC2.33□□□□□ -2.04
SUMO3P55854 MIR6733-201ENST00000635723 61 ntBASIC2.33□□□□□ -2.04
SUMO3P55854 AC007336.1-201ENST00000576365 3828 ntBASIC2.33□□□□□ -2.04
SUMO3P55854 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
SUMO3P55854 AC245060.5-201ENST00000610778 3293 ntBASIC2.32□□□□□ -2.04
SUMO3P55854 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
SUMO3P55854 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.32□□□□□ -2.04
SUMO3P55854 AL391987.6-201ENST00000305671 199 ntBASIC2.32□□□□□ -2.04
SUMO3P55854 Y_RNA.16-201ENST00000362421 102 ntBASIC2.32□□□□□ -2.04
SUMO3P55854 Y_RNA.193-201ENST00000363979 102 ntBASIC2.32□□□□□ -2.04
SUMO3P55854 RNU6-702P-201ENST00000364982 107 ntBASIC2.32□□□□□ -2.04
SUMO3P55854 MIR515-2-201ENST00000384883 83 ntBASIC2.32□□□□□ -2.04
SUMO3P55854 MIR515-1-201ENST00000384884 83 ntBASIC2.32□□□□□ -2.04
SUMO3P55854 RNA5SP210-201ENST00000391034 120 ntBASIC2.32□□□□□ -2.04
SUMO3P55854 SNORD23.1-201ENST00000408212 104 ntBASIC2.32□□□□□ -2.04
SUMO3P55854 RNU2-52P-201ENST00000410680 190 ntBASIC2.32□□□□□ -2.04
SUMO3P55854 RPS12P2-201ENST00000439728 269 ntBASIC2.32□□□□□ -2.04
SUMO3P55854 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.32□□□□□ -2.04
SUMO3P55854 HSPE1P13-201ENST00000451143 297 ntBASIC2.32□□□□□ -2.04
SUMO3P55854 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.32□□□□□ -2.04
SUMO3P55854 YWHAEP4-201ENST00000505390 198 ntBASIC2.32□□□□□ -2.04
SUMO3P55854 Y_RNA.668-201ENST00000516233 93 ntBASIC2.32□□□□□ -2.04
SUMO3P55854 DEFB117-201ENST00000602356 141 ntBASIC2.32□□□□□ -2.04
SUMO3P55854 AC010297.1-201ENST00000623948 149 ntBASIC2.32□□□□□ -2.04
SUMO3P55854 AC022513.1-201ENST00000624512 117 ntBASIC2.32□□□□□ -2.04
SUMO3P55854 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
SUMO3P55854 RNU6-862P-201ENST00000362804 105 ntBASIC2.31□□□□□ -2.04
SUMO3P55854 RNU1-96P-201ENST00000364163 162 ntBASIC2.31□□□□□ -2.04
SUMO3P55854 RNU6-407P-201ENST00000365280 104 ntBASIC2.31□□□□□ -2.04
SUMO3P55854 Y_RNA.418-201ENST00000384029 102 ntBASIC2.31□□□□□ -2.04
SUMO3P55854 RNU6-574P-201ENST00000384265 107 ntBASIC2.31□□□□□ -2.04
SUMO3P55854 RNU6-505P-201ENST00000384427 107 ntBASIC2.31□□□□□ -2.04
SUMO3P55854 MIR196B-201ENST00000384852 84 ntBASIC2.31□□□□□ -2.04
SUMO3P55854 MIR597-201ENST00000384968 97 ntBASIC2.31□□□□□ -2.04
SUMO3P55854 MIR27B-201ENST00000385129 97 ntBASIC2.31□□□□□ -2.04
SUMO3P55854 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
SUMO3P55854 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.31□□□□□ -2.04
SUMO3P55854 AC018634.1-201ENST00000437554 401 ntBASIC2.31□□□□□ -2.04
SUMO3P55854 MTND2P29-201ENST00000438595 412 ntBASIC2.31□□□□□ -2.04
SUMO3P55854 MRPS10P1-201ENST00000448483 130 ntBASIC2.31□□□□□ -2.04
SUMO3P55854 RPS26P55-201ENST00000471178 356 ntBASIC2.31□□□□□ -2.04
SUMO3P55854 HMGB3P3-201ENST00000510526 400 ntBASIC2.31□□□□□ -2.04
SUMO3P55854 SERF1AP1-201ENST00000514575 187 ntBASIC2.31□□□□□ -2.04
SUMO3P55854 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.31□□□□□ -2.04
SUMO3P55854 DEFB108E-201ENST00000524692 240 ntBASIC2.31□□□□□ -2.04
SUMO3P55854 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.31□□□□□ -2.04
SUMO3P55854 AC023157.2-201ENST00000540596 141 ntBASIC2.31□□□□□ -2.04
SUMO3P55854 MIR4438-201ENST00000585271 93 ntBASIC2.31□□□□□ -2.04
SUMO3P55854 AC007229.1-201ENST00000590455 412 ntBASIC2.31□□□□□ -2.04
SUMO3P55854 AC078899.2-201ENST00000595282 212 ntBASIC2.31□□□□□ -2.04
SUMO3P55854 AL049779.4-201ENST00000604500 156 ntBASIC2.31□□□□□ -2.04
SUMO3P55854 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.31□□□□□ -2.04
SUMO3P55854 U4.3-201ENST00000621047 82 ntBASIC2.31□□□□□ -2.04
SUMO3P55854 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.3□□□□□ -2.04
SUMO3P55854 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.3□□□□□ -2.04
SUMO3P55854 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
SUMO3P55854 Y_RNA.124-201ENST00000363339 93 ntBASIC2.3□□□□□ -2.04
SUMO3P55854 RNA5SP456-201ENST00000364002 114 ntBASIC2.3□□□□□ -2.04
SUMO3P55854 Y_RNA.237-201ENST00000364439 102 ntBASIC2.3□□□□□ -2.04
SUMO3P55854 SNORA11.4-201ENST00000408823 129 ntBASIC2.3□□□□□ -2.04
SUMO3P55854 AC099677.2-201ENST00000436385 175 ntBASIC2.3□□□□□ -2.04
SUMO3P55854 SNORD127-201ENST00000458892 86 ntBASIC2.3□□□□□ -2.04
SUMO3P55854 RNU2-19P-201ENST00000517288 84 ntBASIC2.3□□□□□ -2.04
SUMO3P55854 AC024995.1-201ENST00000523014 93 ntBASIC2.3□□□□□ -2.04
SUMO3P55854 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.3□□□□□ -2.04
SUMO3P55854 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
SUMO3P55854 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.29□□□□□ -2.04
SUMO3P55854 RNU1-51P-201ENST00000365345 176 ntBASIC2.29□□□□□ -2.04
SUMO3P55854 RNA5SP450-201ENST00000411206 102 ntBASIC2.29□□□□□ -2.04
SUMO3P55854 MTCO1P5-201ENST00000433573 344 ntBASIC2.29□□□□□ -2.04
SUMO3P55854 RNU7-99P-201ENST00000516271 62 ntBASIC2.29□□□□□ -2.04
SUMO3P55854 RNU6-826P-201ENST00000516827 104 ntBASIC2.29□□□□□ -2.04
SUMO3P55854 MIR3145-201ENST00000580727 82 ntBASIC2.29□□□□□ -2.04
SUMO3P55854 MIR3162-201ENST00000581818 82 ntBASIC2.29□□□□□ -2.04
SUMO3P55854 AL359075.3-201ENST00000613288 217 ntBASIC2.29□□□□□ -2.04
SUMO3P55854 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.29□□□□□ -2.04
SUMO3P55854 U1.36-201ENST00000620684 176 ntBASIC2.29□□□□□ -2.04
SUMO3P55854 AC012640.5-201ENST00000623897 319 ntBASIC2.29□□□□□ -2.04
SUMO3P55854 MIR203B-201ENST00000636080 86 ntBASIC2.29□□□□□ -2.04
SUMO3P55854 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.29□□□□□ -2.04
SUMO3P55854 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
SUMO3P55854 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms