Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 AL357075.2-201ENST00000614906 189 ntBASIC1.05□□□□□ -2.24
PKNOX1P55347 7SK.11-201ENST00000615477 250 ntBASIC1.05□□□□□ -2.24
PKNOX1P55347 AL157834.3-201ENST00000615543 103 ntBASIC1.05□□□□□ -2.24
PKNOX1P55347 AL353997.5-201ENST00000618886 171 ntBASIC1.05□□□□□ -2.24
PKNOX1P55347 7SK.13-201ENST00000622040 250 ntBASIC1.05□□□□□ -2.24
PKNOX1P55347 AC006435.5-201ENST00000624486 112 ntBASIC1.05□□□□□ -2.24
PKNOX1P55347 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.05□□□□□ -2.24
PKNOX1P55347 AC018630.2-201ENST00000534866 2403 ntBASIC1.05□□□□□ -2.24
PKNOX1P55347 Y_RNA.86-201ENST00000363020 111 ntBASIC1.04□□□□□ -2.24
PKNOX1P55347 RNU6-505P-201ENST00000384427 107 ntBASIC1.04□□□□□ -2.24
PKNOX1P55347 MIR329-1-201ENST00000385028 80 ntBASIC1.04□□□□□ -2.24
PKNOX1P55347 MIR190B-201ENST00000401119 79 ntBASIC1.04□□□□□ -2.24
PKNOX1P55347 ELOCP21-201ENST00000412558 336 ntBASIC1.04□□□□□ -2.24
PKNOX1P55347 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.04□□□□□ -2.24
PKNOX1P55347 RPL39P38-201ENST00000467018 153 ntBASIC1.04□□□□□ -2.24
PKNOX1P55347 RPS27P22-201ENST00000478056 241 ntBASIC1.04□□□□□ -2.24
PKNOX1P55347 AC010469.2-201ENST00000496412 480 ntBASIC1.04□□□□□ -2.24
PKNOX1P55347 AC046134.1-201ENST00000514454 666 ntBASIC1.04□□□□□ -2.24
PKNOX1P55347 RNU6-1016P-201ENST00000516689 94 ntBASIC1.04□□□□□ -2.24
PKNOX1P55347 AL513423.1-201ENST00000621695 132 ntBASIC1.04□□□□□ -2.24
PKNOX1P55347 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.03□□□□□ -2.24
PKNOX1P55347 MIR548K-201ENST00000408406 116 ntBASIC1.03□□□□□ -2.24
PKNOX1P55347 MIR1277-201ENST00000408536 78 ntBASIC1.03□□□□□ -2.24
PKNOX1P55347 Y_RNA.594-201ENST00000410373 140 ntBASIC1.03□□□□□ -2.24
PKNOX1P55347 RNU7-94P-201ENST00000459576 63 ntBASIC1.03□□□□□ -2.24
PKNOX1P55347 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.03□□□□□ -2.24
PKNOX1P55347 AC010598.1-201ENST00000510378 103 ntBASIC1.03□□□□□ -2.24
PKNOX1P55347 AC097462.1-201ENST00000514125 324 ntBASIC1.03□□□□□ -2.24
PKNOX1P55347 AC105029.1-201ENST00000520250 669 ntBASIC1.03□□□□□ -2.24
PKNOX1P55347 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.03□□□□□ -2.24
PKNOX1P55347 AL121579.1-201ENST00000555129 305 ntBASIC1.03□□□□□ -2.24
PKNOX1P55347 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.03□□□□□ -2.24
PKNOX1P55347 MIR8065-201ENST00000620577 100 ntBASIC1.03□□□□□ -2.24
PKNOX1P55347 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.03□□□□□ -2.24
PKNOX1P55347 RNA5SP361-201ENST00000362686 118 ntBASIC1.02□□□□□ -2.25
PKNOX1P55347 RNU1-22P-201ENST00000363334 158 ntBASIC1.02□□□□□ -2.25
PKNOX1P55347 SNORA22-201ENST00000383907 134 ntBASIC1.02□□□□□ -2.25
PKNOX1P55347 SNORA20B-201ENST00000384220 132 ntBASIC1.02□□□□□ -2.25
PKNOX1P55347 SNORA22C-201ENST00000384614 134 ntBASIC1.02□□□□□ -2.25
PKNOX1P55347 MIR660-201ENST00000385235 97 ntBASIC1.02□□□□□ -2.25
PKNOX1P55347 AL034345.1-201ENST00000407768 123 ntBASIC1.02□□□□□ -2.25
PKNOX1P55347 MIR548F5-201ENST00000408421 86 ntBASIC1.02□□□□□ -2.25
PKNOX1P55347 AP1B1P2-201ENST00000416196 106 ntBASIC1.02□□□□□ -2.25
PKNOX1P55347 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.02□□□□□ -2.25
PKNOX1P55347 STAG3L5P-204ENST00000443759 179 ntBASIC1.02□□□□□ -2.25
PKNOX1P55347 U8.22-201ENST00000459141 133 ntBASIC1.02□□□□□ -2.25
PKNOX1P55347 AC069439.1-201ENST00000494739 167 ntBASIC1.02□□□□□ -2.25
PKNOX1P55347 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.02□□□□□ -2.25
PKNOX1P55347 AC018710.1-201ENST00000506509 158 ntBASIC1.02□□□□□ -2.25
PKNOX1P55347 Y_RNA.670-201ENST00000516255 105 ntBASIC1.02□□□□□ -2.25
PKNOX1P55347 AC090617.3-201ENST00000573670 475 ntBASIC1.02□□□□□ -2.25
PKNOX1P55347 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.02□□□□□ -2.25
PKNOX1P55347 AC073349.3-201ENST00000617616 186 ntBASIC1.02□□□□□ -2.25
PKNOX1P55347 SNORD3E-202ENST00000627253 216 ntBASIC1.02□□□□□ -2.25
PKNOX1P55347 AC099654.5-201ENST00000636479 350 ntBASIC1.02□□□□□ -2.25
PKNOX1P55347 AC068647.2-201ENST00000637380 353 ntBASIC1.02□□□□□ -2.25
PKNOX1P55347 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
PKNOX1P55347 Y_RNA.339-201ENST00000365325 102 ntBASIC1.01□□□□□ -2.25
PKNOX1P55347 Y_RNA.364-201ENST00000365532 101 ntBASIC1.01□□□□□ -2.25
PKNOX1P55347 RNU6-1264P-201ENST00000383891 107 ntBASIC1.01□□□□□ -2.25
PKNOX1P55347 RNU6-1145P-201ENST00000384246 107 ntBASIC1.01□□□□□ -2.25
PKNOX1P55347 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.01□□□□□ -2.25
PKNOX1P55347 RPS3AP52-201ENST00000435639 297 ntBASIC1.01□□□□□ -2.25
PKNOX1P55347 DYNLT3P2-201ENST00000442517 295 ntBASIC1.01□□□□□ -2.25
PKNOX1P55347 Y_RNA.655-201ENST00000515919 96 ntBASIC1.01□□□□□ -2.25
PKNOX1P55347 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.01□□□□□ -2.25
PKNOX1P55347 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.01□□□□□ -2.25
PKNOX1P55347 AC103810.9-201ENST00000606688 112 ntBASIC1.01□□□□□ -2.25
PKNOX1P55347 MIR6078-201ENST00000611069 100 ntBASIC1.01□□□□□ -2.25
PKNOX1P55347 AC007014.2-201ENST00000615581 479 ntBASIC1.01□□□□□ -2.25
PKNOX1P55347 AC002553.4-201ENST00000616896 331 ntBASIC1.01□□□□□ -2.25
PKNOX1P55347 AC106754.2-201ENST00000623006 233 ntBASIC1.01□□□□□ -2.25
PKNOX1P55347 MIR6079-201ENST00000635807 62 ntBASIC1.01□□□□□ -2.25
PKNOX1P55347 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1□□□□□ -2.25
PKNOX1P55347 Y_RNA.6-201ENST00000362350 114 ntBASIC1□□□□□ -2.25
PKNOX1P55347 Y_RNA.557-201ENST00000384680 107 ntBASIC1□□□□□ -2.25
PKNOX1P55347 RNU6-510P-201ENST00000391239 108 ntBASIC1□□□□□ -2.25
PKNOX1P55347 RNU6-1050P-201ENST00000410388 107 ntBASIC1□□□□□ -2.25
PKNOX1P55347 MTCO3P19-201ENST00000415864 321 ntBASIC1□□□□□ -2.25
PKNOX1P55347 BTF3P4-201ENST00000418852 495 ntBASIC1□□□□□ -2.25
PKNOX1P55347 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1□□□□□ -2.25
PKNOX1P55347 AL353997.1-201ENST00000432936 108 ntBASIC1□□□□□ -2.25
PKNOX1P55347 UQCRBP2-201ENST00000447827 297 ntBASIC1□□□□□ -2.25
PKNOX1P55347 RPS23P4-201ENST00000487908 423 ntBASIC1□□□□□ -2.25
PKNOX1P55347 RNU7-172P-201ENST00000517125 64 ntBASIC1□□□□□ -2.25
PKNOX1P55347 AP002001.1-203ENST00000534002 267 ntBASIC1□□□□□ -2.25
PKNOX1P55347 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1□□□□□ -2.25
PKNOX1P55347 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1□□□□□ -2.25
PKNOX1P55347 MIR4778-201ENST00000577635 80 ntBASIC1□□□□□ -2.25
PKNOX1P55347 MIR4295-201ENST00000585286 85 ntBASIC1□□□□□ -2.25
PKNOX1P55347 SNORD114-21-201ENST00000606412 72 ntBASIC1□□□□□ -2.25
PKNOX1P55347 Y_RNA.2-201ENST00000362330 96 ntBASIC0.99□□□□□ -2.25
PKNOX1P55347 RNY1P16-201ENST00000363063 111 ntBASIC0.99□□□□□ -2.25
PKNOX1P55347 RNU6-593P-201ENST00000364716 112 ntBASIC0.99□□□□□ -2.25
PKNOX1P55347 Y_RNA.595-201ENST00000410403 105 ntBASIC0.99□□□□□ -2.25
PKNOX1P55347 MTND3P8-201ENST00000412909 339 ntBASIC0.99□□□□□ -2.25
PKNOX1P55347 AC074085.1-201ENST00000413598 418 ntBASIC0.99□□□□□ -2.25
PKNOX1P55347 AC091021.1-201ENST00000468051 388 ntBASIC0.99□□□□□ -2.25
PKNOX1P55347 RNU7-40P-201ENST00000516397 64 ntBASIC0.99□□□□□ -2.25
PKNOX1P55347 RNU6-922P-201ENST00000516753 99 ntBASIC0.99□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms