Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 MIR758-201ENST00000390227 88 ntBASIC1.24□□□□□ -2.21
LIM2P55344 RNA5SP467-201ENST00000391274 118 ntBASIC1.24□□□□□ -2.21
LIM2P55344 RNU6-876P-201ENST00000391295 104 ntBASIC1.24□□□□□ -2.21
LIM2P55344 MTCYBP4-201ENST00000401524 249 ntBASIC1.24□□□□□ -2.21
LIM2P55344 RNU6-1001P-201ENST00000411265 100 ntBASIC1.24□□□□□ -2.21
LIM2P55344 PDCL2P1-201ENST00000419302 352 ntBASIC1.24□□□□□ -2.21
LIM2P55344 RPS27P1-201ENST00000450552 247 ntBASIC1.24□□□□□ -2.21
LIM2P55344 HSPE1P24-201ENST00000450782 238 ntBASIC1.24□□□□□ -2.21
LIM2P55344 RPS29P23-201ENST00000458635 123 ntBASIC1.24□□□□□ -2.21
LIM2P55344 RPS26P55-201ENST00000471178 356 ntBASIC1.24□□□□□ -2.21
LIM2P55344 AC103851.1-201ENST00000506833 274 ntBASIC1.24□□□□□ -2.21
LIM2P55344 RNU6-902P-201ENST00000517212 91 ntBASIC1.24□□□□□ -2.21
LIM2P55344 AC091144.1-201ENST00000519573 138 ntBASIC1.24□□□□□ -2.21
LIM2P55344 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.24□□□□□ -2.21
LIM2P55344 TPTEP1-208ENST00000636884 213 ntBASIC1.24□□□□□ -2.21
LIM2P55344 SNORD114-7-201ENST00000362520 77 ntBASIC1.23□□□□□ -2.21
LIM2P55344 Y_RNA.404-201ENST00000383978 102 ntBASIC1.23□□□□□ -2.21
LIM2P55344 MIR562-201ENST00000384894 95 ntBASIC1.23□□□□□ -2.21
LIM2P55344 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.23□□□□□ -2.21
LIM2P55344 MTCO3P19-201ENST00000415864 321 ntBASIC1.23□□□□□ -2.21
LIM2P55344 AL445305.1-201ENST00000432577 575 ntBASIC1.23□□□□□ -2.21
LIM2P55344 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.23□□□□□ -2.21
LIM2P55344 AC027119.1-201ENST00000440877 241 ntBASIC1.23□□□□□ -2.21
LIM2P55344 UQCRBP2-201ENST00000447827 297 ntBASIC1.23□□□□□ -2.21
LIM2P55344 MRPS10P1-201ENST00000448483 130 ntBASIC1.23□□□□□ -2.21
LIM2P55344 SNORD65B-201ENST00000459126 73 ntBASIC1.23□□□□□ -2.21
LIM2P55344 AC004223.1-201ENST00000479840 271 ntBASIC1.23□□□□□ -2.21
LIM2P55344 RPL7P42-201ENST00000481005 679 ntBASIC1.23□□□□□ -2.21
LIM2P55344 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.23□□□□□ -2.21
LIM2P55344 SNORA20.3-201ENST00000516880 132 ntBASIC1.23□□□□□ -2.21
LIM2P55344 RNU7-128P-201ENST00000517247 62 ntBASIC1.23□□□□□ -2.21
LIM2P55344 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.23□□□□□ -2.21
LIM2P55344 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.23□□□□□ -2.21
LIM2P55344 SUB1P3-201ENST00000564581 315 ntBASIC1.23□□□□□ -2.21
LIM2P55344 AL162424.1-201ENST00000602325 221 ntBASIC1.23□□□□□ -2.21
LIM2P55344 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.23□□□□□ -2.21
LIM2P55344 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.23□□□□□ -2.21
LIM2P55344 AL669831.3-213ENST00000636676 183 ntBASIC1.23□□□□□ -2.21
LIM2P55344 AC099654.14-201ENST00000638599 341 ntBASIC1.23□□□□□ -2.21
LIM2P55344 RNU6-271P-201ENST00000363858 105 ntBASIC1.22□□□□□ -2.21
LIM2P55344 SNORD81.2-201ENST00000365153 76 ntBASIC1.22□□□□□ -2.21
LIM2P55344 Y_RNA.557-201ENST00000384680 107 ntBASIC1.22□□□□□ -2.21
LIM2P55344 Y_RNA.577-201ENST00000384794 101 ntBASIC1.22□□□□□ -2.21
LIM2P55344 SNORA40.6-201ENST00000391153 128 ntBASIC1.22□□□□□ -2.21
LIM2P55344 RPL21P1-201ENST00000399532 476 ntBASIC1.22□□□□□ -2.21
LIM2P55344 RN7SKP200-201ENST00000410564 320 ntBASIC1.22□□□□□ -2.21
LIM2P55344 AC004965.1-201ENST00000413033 213 ntBASIC1.22□□□□□ -2.21
LIM2P55344 AC010154.1-201ENST00000425857 269 ntBASIC1.22□□□□□ -2.21
LIM2P55344 RBMX2P4-201ENST00000441256 376 ntBASIC1.22□□□□□ -2.21
LIM2P55344 PCNPP5-201ENST00000452246 481 ntBASIC1.22□□□□□ -2.21
LIM2P55344 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.22□□□□□ -2.21
LIM2P55344 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.22□□□□□ -2.21
LIM2P55344 SCARNA16.2-201ENST00000516520 172 ntBASIC1.22□□□□□ -2.21
LIM2P55344 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.22□□□□□ -2.21
LIM2P55344 FRG2DP-202ENST00000566967 323 ntBASIC1.22□□□□□ -2.21
LIM2P55344 MIR5690-201ENST00000583739 73 ntBASIC1.22□□□□□ -2.21
LIM2P55344 MIR3660-201ENST00000584845 100 ntBASIC1.22□□□□□ -2.21
LIM2P55344 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.22□□□□□ -2.21
LIM2P55344 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.22□□□□□ -2.21
LIM2P55344 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.22□□□□□ -2.21
LIM2P55344 RNU6-874P-201ENST00000362390 105 ntBASIC1.21□□□□□ -2.22
LIM2P55344 SNORD1A-201ENST00000364968 72 ntBASIC1.21□□□□□ -2.22
LIM2P55344 Y_RNA.473-201ENST00000384333 102 ntBASIC1.21□□□□□ -2.22
LIM2P55344 RNU6-1065P-201ENST00000384513 106 ntBASIC1.21□□□□□ -2.22
LIM2P55344 SNORA75.6-201ENST00000391318 127 ntBASIC1.21□□□□□ -2.22
LIM2P55344 MRPL42P3-201ENST00000401492 326 ntBASIC1.21□□□□□ -2.22
LIM2P55344 ELOCP21-201ENST00000412558 336 ntBASIC1.21□□□□□ -2.22
LIM2P55344 AL353997.1-201ENST00000432936 108 ntBASIC1.21□□□□□ -2.22
LIM2P55344 AC098614.3-201ENST00000438957 440 ntBASIC1.21□□□□□ -2.22
LIM2P55344 PGBD4P5-201ENST00000445958 426 ntBASIC1.21□□□□□ -2.22
LIM2P55344 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.21□□□□□ -2.22
LIM2P55344 AC079140.2-201ENST00000506193 142 ntBASIC1.21□□□□□ -2.22
LIM2P55344 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.21□□□□□ -2.22
LIM2P55344 AC022217.4-201ENST00000604389 163 ntBASIC1.21□□□□□ -2.22
LIM2P55344 AC133104.2-201ENST00000615272 193 ntBASIC1.21□□□□□ -2.22
LIM2P55344 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.21□□□□□ -2.22
LIM2P55344 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
LIM2P55344 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
LIM2P55344 RNU6-1188P-201ENST00000363795 107 ntBASIC1.2□□□□□ -2.22
LIM2P55344 SNORA4.2-201ENST00000365313 147 ntBASIC1.2□□□□□ -2.22
LIM2P55344 RNU6-331P-201ENST00000384724 107 ntBASIC1.2□□□□□ -2.22
LIM2P55344 RNU6-1031P-201ENST00000384773 107 ntBASIC1.2□□□□□ -2.22
LIM2P55344 MIR625-201ENST00000385047 85 ntBASIC1.2□□□□□ -2.22
LIM2P55344 AC138393.2-201ENST00000414742 246 ntBASIC1.2□□□□□ -2.22
LIM2P55344 AC092423.1-201ENST00000430165 186 ntBASIC1.2□□□□□ -2.22
LIM2P55344 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC1.2□□□□□ -2.22
LIM2P55344 RNU7-87P-201ENST00000459343 62 ntBASIC1.2□□□□□ -2.22
LIM2P55344 RNU7-34P-201ENST00000459394 64 ntBASIC1.2□□□□□ -2.22
LIM2P55344 RNU6-107P-201ENST00000516643 102 ntBASIC1.2□□□□□ -2.22
LIM2P55344 RNU7-4P-201ENST00000516961 62 ntBASIC1.2□□□□□ -2.22
LIM2P55344 RAB11AP2-201ENST00000545905 639 ntBASIC1.2□□□□□ -2.22
LIM2P55344 AC018448.1-201ENST00000552843 316 ntBASIC1.2□□□□□ -2.22
LIM2P55344 MIR4438-201ENST00000585271 93 ntBASIC1.2□□□□□ -2.22
LIM2P55344 AC113139.1-201ENST00000605049 239 ntBASIC1.2□□□□□ -2.22
LIM2P55344 AC005828.6-201ENST00000606610 232 ntBASIC1.2□□□□□ -2.22
LIM2P55344 AL121890.5-201ENST00000620848 304 ntBASIC1.2□□□□□ -2.22
LIM2P55344 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.2□□□□□ -2.22
LIM2P55344 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
LIM2P55344 AC018630.2-201ENST00000534866 2403 ntBASIC1.19□□□□□ -2.22
LIM2P55344 RNU6-879P-201ENST00000364328 108 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms